RNA–Protein interactions for RNA: ENST00000472345.5

EXOSC1-206, Transcript of exosome component 1, humanhuman

TSL 3

Gene EXOSC1, Length 451 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-206ENST00000472345 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
EXOSC1-206ENST00000472345 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
EXOSC1-206ENST00000472345 KCNA6P17658 529 aa17.34■□□□□ 0.37
EXOSC1-206ENST00000472345 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
EXOSC1-206ENST00000472345 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
EXOSC1-206ENST00000472345 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
EXOSC1-206ENST00000472345 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
EXOSC1-206ENST00000472345 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
EXOSC1-206ENST00000472345 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
EXOSC1-206ENST00000472345 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
EXOSC1-206ENST00000472345 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
EXOSC1-206ENST00000472345 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
EXOSC1-206ENST00000472345 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
EXOSC1-206ENST00000472345 SLC52A1Q9NWF4 448 aa17.29■□□□□ 0.36
EXOSC1-206ENST00000472345 APLP2Q06481 763 aa17.28■□□□□ 0.36
EXOSC1-206ENST00000472345 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
EXOSC1-206ENST00000472345 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
EXOSC1-206ENST00000472345 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
EXOSC1-206ENST00000472345 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
EXOSC1-206ENST00000472345 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
EXOSC1-206ENST00000472345 PROSER2Q86WR7 435 aaPredicted RBP17.24■□□□□ 0.35
EXOSC1-206ENST00000472345 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
EXOSC1-206ENST00000472345 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
EXOSC1-206ENST00000472345 LRP6O75581 1613 aa17.23■□□□□ 0.35
EXOSC1-206ENST00000472345 POTEAQ6S8J7 498 aa17.23■□□□□ 0.35
EXOSC1-206ENST00000472345 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
EXOSC1-206ENST00000472345 MSH6P52701 1360 aa17.22■□□□□ 0.35
EXOSC1-206ENST00000472345 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
EXOSC1-206ENST00000472345 PTPRUQ92729 1446 aa17.21■□□□□ 0.34
EXOSC1-206ENST00000472345 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
EXOSC1-206ENST00000472345 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
EXOSC1-206ENST00000472345 TRPM2O94759 1503 aa17.19■□□□□ 0.34
EXOSC1-206ENST00000472345 TBX22Q9Y458 520 aa17.18■□□□□ 0.34
EXOSC1-206ENST00000472345 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
EXOSC1-206ENST00000472345 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
EXOSC1-206ENST00000472345 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
EXOSC1-206ENST00000472345 JCADQ9P266 1359 aa17.15■□□□□ 0.34
EXOSC1-206ENST00000472345 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
EXOSC1-206ENST00000472345 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
EXOSC1-206ENST00000472345 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
EXOSC1-206ENST00000472345 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
EXOSC1-206ENST00000472345 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
EXOSC1-206ENST00000472345 NUP155O75694 1391 aa17.11■□□□□ 0.33
EXOSC1-206ENST00000472345 DCCP43146 1447 aa17.11■□□□□ 0.33
EXOSC1-206ENST00000472345 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
EXOSC1-206ENST00000472345 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
EXOSC1-206ENST00000472345 BCANQ96GW7 911 aa17.1■□□□□ 0.33
EXOSC1-206ENST00000472345 MST1RQ04912 1400 aa17.09■□□□□ 0.33
EXOSC1-206ENST00000472345 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
EXOSC1-206ENST00000472345 LAMC1P11047 1609 aa17.07■□□□□ 0.32
EXOSC1-206ENST00000472345 METP08581 1390 aa17.06■□□□□ 0.32
EXOSC1-206ENST00000472345 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
EXOSC1-206ENST00000472345 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
EXOSC1-206ENST00000472345 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
EXOSC1-206ENST00000472345 KIF1BO60333 1816 aa17.05■□□□□ 0.32
EXOSC1-206ENST00000472345 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
EXOSC1-206ENST00000472345 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
EXOSC1-206ENST00000472345 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
EXOSC1-206ENST00000472345 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
EXOSC1-206ENST00000472345 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
EXOSC1-206ENST00000472345 ADGRL3Q9HAR2 1447 aa17.03■□□□□ 0.32
EXOSC1-206ENST00000472345 NAIPQ13075 1403 aa17.02■□□□□ 0.31
EXOSC1-206ENST00000472345 PRAG1Q86YV5 1406 aa17.01■□□□□ 0.31
EXOSC1-206ENST00000472345 PPLO60437 1756 aa17■□□□□ 0.31
EXOSC1-206ENST00000472345 ATF3P18847 181 aa16.99■□□□□ 0.31
EXOSC1-206ENST00000472345 ITGAEP38570 1179 aa16.99■□□□□ 0.31
EXOSC1-206ENST00000472345 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
EXOSC1-206ENST00000472345 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
EXOSC1-206ENST00000472345 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
EXOSC1-206ENST00000472345 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
EXOSC1-206ENST00000472345 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
EXOSC1-206ENST00000472345 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
EXOSC1-206ENST00000472345 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
EXOSC1-206ENST00000472345 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
EXOSC1-206ENST00000472345 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
EXOSC1-206ENST00000472345 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
EXOSC1-206ENST00000472345 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
EXOSC1-206ENST00000472345 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
EXOSC1-206ENST00000472345 RGS12O14924 1447 aa16.92■□□□□ 0.3
EXOSC1-206ENST00000472345 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
EXOSC1-206ENST00000472345 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
EXOSC1-206ENST00000472345 AFF2P51816 1311 aa16.9■□□□□ 0.3
EXOSC1-206ENST00000472345 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
EXOSC1-206ENST00000472345 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
EXOSC1-206ENST00000472345 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
EXOSC1-206ENST00000472345 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 EP400Q96L91 3159 aa16.87■□□□□ 0.29
EXOSC1-206ENST00000472345 PXDNQ92626 1479 aa16.85■□□□□ 0.29
EXOSC1-206ENST00000472345 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
EXOSC1-206ENST00000472345 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
EXOSC1-206ENST00000472345 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
EXOSC1-206ENST00000472345 RXRBP28702 533 aa16.83■□□□□ 0.28
EXOSC1-206ENST00000472345 MYOM2P54296 1465 aa16.83■□□□□ 0.28
EXOSC1-206ENST00000472345 TECPR2O15040 1411 aa16.82■□□□□ 0.28
EXOSC1-206ENST00000472345 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
EXOSC1-206ENST00000472345 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms