RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
SGCE-210ENST00000472326 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.82■□□□□ 0.12
SGCE-210ENST00000472326 RNF40O75150 1001 aa15.81■□□□□ 0.12
SGCE-210ENST00000472326 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
SGCE-210ENST00000472326 THSD4Q6ZMP0 1018 aa15.8■□□□□ 0.12
SGCE-210ENST00000472326 SOWAHBA6NEL2 793 aa15.79■□□□□ 0.12
SGCE-210ENST00000472326 AMHR2Q16671 573 aa15.77■□□□□ 0.12
SGCE-210ENST00000472326 REPIN1Q9BWE0 567 aaKnown RBP15.77■□□□□ 0.12
SGCE-210ENST00000472326 PTPN5P54829 565 aa15.76■□□□□ 0.11
SGCE-210ENST00000472326 TTLL12Q14166 644 aaPredicted RBP15.76■□□□□ 0.11
SGCE-210ENST00000472326 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
SGCE-210ENST00000472326 PDE4DQ08499 809 aa15.75■□□□□ 0.11
SGCE-210ENST00000472326 HPS5Q9UPZ3 1129 aa15.74■□□□□ 0.11
SGCE-210ENST00000472326 GPCPD1Q9NPB8 672 aa15.73■□□□□ 0.11
SGCE-210ENST00000472326 CLCN1P35523 988 aa15.72■□□□□ 0.11
SGCE-210ENST00000472326 SLF2Q8IX21 1173 aa15.72■□□□□ 0.11
SGCE-210ENST00000472326 PARP9Q8IXQ6 854 aa15.72■□□□□ 0.11
SGCE-210ENST00000472326 DDX11L8A8MPP1 907 aa15.71■□□□□ 0.11
SGCE-210ENST00000472326 TMUB1Q9BVT8 246 aa15.71■□□□□ 0.11
SGCE-210ENST00000472326 PLSCR2Q9NRY7 297 aa15.71■□□□□ 0.11
SGCE-210ENST00000472326 WBP1LQ9NX94 342 aa15.71■□□□□ 0.11
SGCE-210ENST00000472326 TSR3Q9UJK0 312 aaKnown RBP15.69■□□□□ 0.1
SGCE-210ENST00000472326 SLC10A3P09131 477 aa15.68■□□□□ 0.1
SGCE-210ENST00000472326 SLC4A3P48751 1232 aa15.68■□□□□ 0.1
SGCE-210ENST00000472326 PPP4CP60510 307 aa15.68■□□□□ 0.1
SGCE-210ENST00000472326 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
SGCE-210ENST00000472326 RDH13Q8NBN7 331 aa15.66■□□□□ 0.1
SGCE-210ENST00000472326 GPBP1L1Q9HC44 474 aaPredicted RBP15.65■□□□□ 0.1
SGCE-210ENST00000472326 FAM217BQ9NTX9 383 aaPredicted RBP15.65■□□□□ 0.1
SGCE-210ENST00000472326 SULF1Q8IWU6 871 aa15.63■□□□□ 0.09
SGCE-210ENST00000472326 SSTR3P32745 418 aaPredicted RBP15.62■□□□□ 0.09
SGCE-210ENST00000472326 HCSTQ9UBK5 93 aa15.62■□□□□ 0.09
SGCE-210ENST00000472326 CFHP08603 1231 aa15.6■□□□□ 0.09
SGCE-210ENST00000472326 MS4A1P11836 297 aa15.59■□□□□ 0.09
SGCE-210ENST00000472326 CD46P15529 392 aa15.59■□□□□ 0.09
SGCE-210ENST00000472326 NEUROD2Q15784 382 aa15.59■□□□□ 0.09
SGCE-210ENST00000472326 APLP1P51693 650 aa15.58■□□□□ 0.08
SGCE-210ENST00000472326 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
SGCE-210ENST00000472326 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
SGCE-210ENST00000472326 NECTIN2Q92692 538 aa15.56■□□□□ 0.08
SGCE-210ENST00000472326 KDM4CQ9H3R0 1056 aa15.56■□□□□ 0.08
SGCE-210ENST00000472326 GCGRP47871 477 aa15.53■□□□□ 0.08
SGCE-210ENST00000472326 KMT5BQ4FZB7 885 aa15.52■□□□□ 0.08
SGCE-210ENST00000472326 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.08
SGCE-210ENST00000472326 NYAP1Q6ZVC0 841 aa15.5■□□□□ 0.07
SGCE-210ENST00000472326 ACTN4O43707 911 aaKnown RBP15.48■□□□□ 0.07
SGCE-210ENST00000472326 FUT2Q10981 343 aa15.47■□□□□ 0.07
SGCE-210ENST00000472326 PRR14Q9BWN1 585 aa15.46■□□□□ 0.07
SGCE-210ENST00000472326 FAM117AQ9C073 453 aa15.46■□□□□ 0.07
SGCE-210ENST00000472326 PUS10Q3MIT2 529 aaKnown RBP15.45■□□□□ 0.06
SGCE-210ENST00000472326 PCDHB3Q9Y5E6 796 aa15.45■□□□□ 0.06
SGCE-210ENST00000472326 KDM4AO75164 1064 aa15.44■□□□□ 0.06
SGCE-210ENST00000472326 COPS2P61201 443 aa15.43■□□□□ 0.06
SGCE-210ENST00000472326 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
SGCE-210ENST00000472326 BLOC1S3Q6QNY0 202 aa15.41■□□□□ 0.06
SGCE-210ENST00000472326 SPIRE2Q8WWL2 714 aa15.41■□□□□ 0.06
SGCE-210ENST00000472326 MTRQ99707 1265 aa15.41■□□□□ 0.06
SGCE-210ENST00000472326 HLA-CQ95604 372 aa15.4■□□□□ 0.06
SGCE-210ENST00000472326 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
SGCE-210ENST00000472326 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
SGCE-210ENST00000472326 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
SGCE-210ENST00000472326 TJAP1Q5JTD0 557 aa15.37■□□□□ 0.05
SGCE-210ENST00000472326 IL27Q8NEV9 243 aa15.37■□□□□ 0.05
SGCE-210ENST00000472326 HOXA2O43364 376 aa15.36■□□□□ 0.05
SGCE-210ENST00000472326 GUCA2AQ02747 115 aa15.36■□□□□ 0.05
SGCE-210ENST00000472326 MORN1Q5T089 497 aa15.36■□□□□ 0.05
SGCE-210ENST00000472326 ZNF516Q92618 1163 aa15.36■□□□□ 0.05
SGCE-210ENST00000472326 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
SGCE-210ENST00000472326 NDUFV2P19404 249 aa15.34■□□□□ 0.05
SGCE-210ENST00000472326 USP46P62068 366 aa15.34■□□□□ 0.05
SGCE-210ENST00000472326 MOXD2PA6NHM9 499 aa15.33■□□□□ 0.04
SGCE-210ENST00000472326 IL21Q9HBE4 155 aa15.33■□□□□ 0.04
SGCE-210ENST00000472326 SLC27A5Q9Y2P5 690 aa15.33■□□□□ 0.04
SGCE-210ENST00000472326 GRIPAP1Q4V328 841 aa15.32■□□□□ 0.04
SGCE-210ENST00000472326 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
SGCE-210ENST00000472326 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
SGCE-210ENST00000472326 MYSM1Q5VVJ2 828 aa15.3■□□□□ 0.04
SGCE-210ENST00000472326 TLL1O43897 1013 aa15.29■□□□□ 0.04
SGCE-210ENST00000472326 NR1I2O75469 434 aa15.29■□□□□ 0.04
SGCE-210ENST00000472326 ZPR1O75312 459 aa15.28■□□□□ 0.04
SGCE-210ENST00000472326 KCNC4Q03721 635 aa15.28■□□□□ 0.04
SGCE-210ENST00000472326 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
SGCE-210ENST00000472326 FDX1P10109 184 aa15.27■□□□□ 0.04
SGCE-210ENST00000472326 NKX2-3Q8TAU0 364 aa15.27■□□□□ 0.04
SGCE-210ENST00000472326 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
SGCE-210ENST00000472326 PLA2G2EQ9NZK7 142 aa15.27■□□□□ 0.04
SGCE-210ENST00000472326 PCDHGC3Q9UN70 934 aa15.26■□□□□ 0.03
SGCE-210ENST00000472326 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
SGCE-210ENST00000472326 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
SGCE-210ENST00000472326 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
SGCE-210ENST00000472326 RSPH6AQ9H0K4 717 aa15.24■□□□□ 0.03
SGCE-210ENST00000472326 LIMD1Q9UGP4 676 aa15.24■□□□□ 0.03
SGCE-210ENST00000472326 CSPP1Q1MSJ5 1256 aa15.23■□□□□ 0.03
SGCE-210ENST00000472326 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
SGCE-210ENST00000472326 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
SGCE-210ENST00000472326 SPTLC1O15269 473 aa15.22■□□□□ 0.03
SGCE-210ENST00000472326 SH3D19Q5HYK7 790 aa15.21■□□□□ 0.03
SGCE-210ENST00000472326 THAP11Q96EK4 314 aa15.21■□□□□ 0.03
SGCE-210ENST00000472326 CLK2P49760 499 aaKnown RBP15.2■□□□□ 0.02
SGCE-210ENST00000472326 BRICD5Q6PL45 260 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms