RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 PHLPP1O60346 1717 aa31.1■■■□□ 2.57
CCDC78-208ENST00000471861 ADGRL2O95490 1459 aa31.09■■■□□ 2.57
CCDC78-208ENST00000471861 MSH6P52701 1360 aa31.09■■■□□ 2.57
CCDC78-208ENST00000471861 SLC52A1Q9NWF4 448 aa31.07■■■□□ 2.56
CCDC78-208ENST00000471861 MYO5BQ9ULV0 1848 aa31.06■■■□□ 2.56
CCDC78-208ENST00000471861 CHD2O14647 1828 aaKnown RBP31.05■■■□□ 2.56
CCDC78-208ENST00000471861 RPRD2Q5VT52 1461 aaKnown RBP31.05■■■□□ 2.56
CCDC78-208ENST00000471861 COL16A1Q07092 1604 aaPredicted RBP31.05■■■□□ 2.56
CCDC78-208ENST00000471861 PLEKHG1Q9ULL1 1385 aa31.05■■■□□ 2.56
CCDC78-208ENST00000471861 GCC2Q8IWJ2 1684 aa31.04■■■□□ 2.56
CCDC78-208ENST00000471861 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
CCDC78-208ENST00000471861 JCADQ9P266 1359 aa31.03■■■□□ 2.56
CCDC78-208ENST00000471861 TMEM131LA2VDJ0 1609 aa31.02■■■□□ 2.56
CCDC78-208ENST00000471861 RIMS2Q9UQ26 1411 aa31.01■■■□□ 2.55
CCDC78-208ENST00000471861 BCANQ96GW7 911 aa31■■■□□ 2.55
CCDC78-208ENST00000471861 LRP6O75581 1613 aa30.98■■■□□ 2.55
CCDC78-208ENST00000471861 ANKRD50Q9ULJ7 1429 aa30.98■■■□□ 2.55
CCDC78-208ENST00000471861 APLP2Q06481 763 aa30.97■■■□□ 2.55
CCDC78-208ENST00000471861 ADAMTS13Q76LX8 1427 aa30.93■■■□□ 2.54
CCDC78-208ENST00000471861 NCOA3Q9Y6Q9 1424 aa30.92■■■□□ 2.54
CCDC78-208ENST00000471861 PPP1R15AO75807 674 aaPredicted RBP30.91■■■□□ 2.54
CCDC78-208ENST00000471861 TBX22Q9Y458 520 aa30.9■■■□□ 2.54
CCDC78-208ENST00000471861 UNC13BO14795 1591 aa30.9■■■□□ 2.54
CCDC78-208ENST00000471861 AHDC1Q5TGY3 1603 aaPredicted RBP30.9■■■□□ 2.54
CCDC78-208ENST00000471861 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.88■■■□□ 2.53
CCDC78-208ENST00000471861 DIP2AQ14689 1571 aa30.87■■■□□ 2.53
CCDC78-208ENST00000471861 E9PCH4 1651 aa30.86■■■□□ 2.53
CCDC78-208ENST00000471861 SHPRHQ149N8 1683 aa30.85■■■□□ 2.53
CCDC78-208ENST00000471861 SPATA31A6Q5VVP1 1343 aa30.85■■■□□ 2.53
CCDC78-208ENST00000471861 FAM50AQ14320 339 aaKnown RBP30.84■■■□□ 2.53
CCDC78-208ENST00000471861 HDGFP51858 240 aaKnown RBP30.82■■■□□ 2.52
CCDC78-208ENST00000471861 NUTM2DQ5VT03 806 aaPredicted RBP30.82■■■□□ 2.52
CCDC78-208ENST00000471861 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.8■■■□□ 2.52
CCDC78-208ENST00000471861 PTPRUQ92729 1446 aa30.8■■■□□ 2.52
CCDC78-208ENST00000471861 PIK3R4Q99570 1358 aa30.79■■■□□ 2.52
CCDC78-208ENST00000471861 CHGAP10645 457 aaKnown RBP30.79■■■□□ 2.52
CCDC78-208ENST00000471861 C14orf37Q86TY3 774 aa30.79■■■□□ 2.52
CCDC78-208ENST00000471861 CADPS2Q86UW7 1296 aa30.78■■■□□ 2.52
CCDC78-208ENST00000471861 C19orf44Q9H6X5 657 aa30.78■■■□□ 2.52
CCDC78-208ENST00000471861 IQGAP3Q86VI3 1631 aa30.76■■■□□ 2.52
CCDC78-208ENST00000471861 TRPM2O94759 1503 aa30.76■■■□□ 2.51
CCDC78-208ENST00000471861 MEX3CQ5U5Q3 659 aaKnown RBP30.75■■■□□ 2.51
CCDC78-208ENST00000471861 UPF1Q92900 1129 aaKnown RBP eCLIP30.75■■■□□ 2.51
CCDC78-208ENST00000471861 ZNF772Q68DY9 489 aaPredicted RBP30.74■■■□□ 2.51
CCDC78-208ENST00000471861 ATF3P18847 181 aa30.73■■■□□ 2.51
CCDC78-208ENST00000471861 BRINP3Q76B58 766 aa30.73■■■□□ 2.51
CCDC78-208ENST00000471861 TRIM52Q96A61 297 aa30.73■■■□□ 2.51
CCDC78-208ENST00000471861 NRXN3Q9Y4C0 1643 aa30.73■■■□□ 2.51
CCDC78-208ENST00000471861 XRN1Q8IZH2 1706 aaKnown RBP30.71■■■□□ 2.51
CCDC78-208ENST00000471861 AMOTL2Q9Y2J4 779 aa30.7■■■□□ 2.51
CCDC78-208ENST00000471861 ASXL1Q8IXJ9 1541 aa30.69■■■□□ 2.5
CCDC78-208ENST00000471861 DCCP43146 1447 aa30.69■■■□□ 2.5
CCDC78-208ENST00000471861 ROCK1Q13464 1354 aa30.66■■■□□ 2.5
CCDC78-208ENST00000471861 SETBP1Q9Y6X0 1596 aa30.65■■■□□ 2.5
CCDC78-208ENST00000471861 NHSL1Q5SYE7 1610 aa30.65■■■□□ 2.5
CCDC78-208ENST00000471861 MST1RQ04912 1400 aa30.64■■■□□ 2.5
CCDC78-208ENST00000471861 SETD5Q9C0A6 1442 aa30.64■■■□□ 2.49
CCDC78-208ENST00000471861 CDK12Q9NYV4 1490 aaPredicted RBP30.63■■■□□ 2.49
CCDC78-208ENST00000471861 NUTM2BA6NNL0 878 aaPredicted RBP30.61■■■□□ 2.49
CCDC78-208ENST00000471861 NUTM2EB1AL46 878 aaPredicted RBP30.61■■■□□ 2.49
CCDC78-208ENST00000471861 RXRBP28702 533 aa30.61■■■□□ 2.49
CCDC78-208ENST00000471861 NUTM2AQ8IVF1 878 aaPredicted RBP30.61■■■□□ 2.49
CCDC78-208ENST00000471861 NUP155O75694 1391 aa30.59■■■□□ 2.49
CCDC78-208ENST00000471861 AFF2P51816 1311 aa30.58■■■□□ 2.49
CCDC78-208ENST00000471861 METP08581 1390 aa30.57■■■□□ 2.48
CCDC78-208ENST00000471861 SPHKAPQ2M3C7 1700 aa30.54■■■□□ 2.48
CCDC78-208ENST00000471861 RGS12O14924 1447 aa30.53■■■□□ 2.48
CCDC78-208ENST00000471861 NALCNQ8IZF0 1738 aa30.53■■■□□ 2.48
CCDC78-208ENST00000471861 DDX17Q92841 729 aaKnown RBP30.52■■■□□ 2.48
CCDC78-208ENST00000471861 ADGRL3Q9HAR2 1447 aa30.52■■■□□ 2.48
CCDC78-208ENST00000471861 PNPLA6Q8IY17 1366 aa30.51■■■□□ 2.47
CCDC78-208ENST00000471861 NEXMIFQ5QGS0 1516 aa30.47■■■□□ 2.47
CCDC78-208ENST00000471861 LRRC59Q96AG4 307 aaKnown RBP30.46■■■□□ 2.47
CCDC78-208ENST00000471861 C8orf37Q96NL8 207 aa30.45■■■□□ 2.47
CCDC78-208ENST00000471861 CLTCL1P53675 1640 aa30.44■■■□□ 2.46
CCDC78-208ENST00000471861 ZNF326Q5BKZ1 582 aaKnown RBP30.42■■■□□ 2.46
CCDC78-208ENST00000471861 LAMC1P11047 1609 aa30.42■■■□□ 2.46
CCDC78-208ENST00000471861 C1orf167Q5SNV9 1468 aa30.41■■■□□ 2.46
CCDC78-208ENST00000471861 ITGAEP38570 1179 aa30.4■■■□□ 2.46
CCDC78-208ENST00000471861 QTRT2Q9H974 415 aaKnown RBP30.4■■■□□ 2.46
CCDC78-208ENST00000471861 RBM6P78332 1123 aaKnown RBP30.39■■■□□ 2.46
CCDC78-208ENST00000471861 PTCH1Q13635 1447 aa30.35■■■□□ 2.45
CCDC78-208ENST00000471861 SRCAPQ6ZRS2 3230 aa30.35■■■□□ 2.45
CCDC78-208ENST00000471861 ADAMTS2O95450 1211 aa30.32■■■□□ 2.44
CCDC78-208ENST00000471861 ROBO2Q9HCK4 1378 aa30.31■■■□□ 2.44
CCDC78-208ENST00000471861 SOS2Q07890 1332 aaPredicted RBP30.3■■■□□ 2.44
CCDC78-208ENST00000471861 NGLY1Q96IV0 654 aa30.29■■■□□ 2.44
CCDC78-208ENST00000471861 PRAG1Q86YV5 1406 aa30.29■■■□□ 2.44
CCDC78-208ENST00000471861 ORAI2Q96SN7 254 aa30.28■■■□□ 2.44
CCDC78-208ENST00000471861 KIF1BO60333 1816 aa30.27■■■□□ 2.44
CCDC78-208ENST00000471861 COL22A1Q8NFW1 1626 aaPredicted RBP30.25■■■□□ 2.43
CCDC78-208ENST00000471861 ATAD2Q6PL18 1390 aa30.23■■■□□ 2.43
CCDC78-208ENST00000471861 USP21Q9UK80 565 aa30.22■■■□□ 2.43
CCDC78-208ENST00000471861 ATRNO75882 1429 aa30.21■■■□□ 2.43
CCDC78-208ENST00000471861 FNBP4Q8N3X1 1017 aaPredicted RBP30.2■■■□□ 2.43
CCDC78-208ENST00000471861 MYOM2P54296 1465 aa30.19■■■□□ 2.42
CCDC78-208ENST00000471861 PPARGC1BQ86YN6 1023 aaKnown RBP30.19■■■□□ 2.42
CCDC78-208ENST00000471861 TRPC5Q9UL62 973 aaPredicted RBP30.18■■■□□ 2.42
CCDC78-208ENST00000471861 NAIPQ13075 1403 aa30.18■■■□□ 2.42
CCDC78-208ENST00000471861 EP400Q96L91 3159 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms