RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
CHKB-206ENST00000471515 KCNA6P17658 529 aa13.44□□□□□ -0.26
CHKB-206ENST00000471515 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
CHKB-206ENST00000471515 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
CHKB-206ENST00000471515 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
CHKB-206ENST00000471515 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
CHKB-206ENST00000471515 PPARGC1BQ86YN6 1023 aaKnown RBP13.42□□□□□ -0.26
CHKB-206ENST00000471515 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
CHKB-206ENST00000471515 NUP155O75694 1391 aa13.42□□□□□ -0.26
CHKB-206ENST00000471515 FAM135BQ49AJ0 1406 aa13.41□□□□□ -0.26
CHKB-206ENST00000471515 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
CHKB-206ENST00000471515 NAIPQ13075 1403 aa13.4□□□□□ -0.26
CHKB-206ENST00000471515 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
CHKB-206ENST00000471515 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
CHKB-206ENST00000471515 DIP2AQ14689 1571 aa13.38□□□□□ -0.27
CHKB-206ENST00000471515 TBX22Q9Y458 520 aa13.38□□□□□ -0.27
CHKB-206ENST00000471515 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
CHKB-206ENST00000471515 ITGAEP38570 1179 aa13.36□□□□□ -0.27
CHKB-206ENST00000471515 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
CHKB-206ENST00000471515 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 PTPRUQ92729 1446 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
CHKB-206ENST00000471515 TRPM2O94759 1503 aa13.34□□□□□ -0.27
CHKB-206ENST00000471515 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
CHKB-206ENST00000471515 PROSER2Q86WR7 435 aaPredicted RBP13.34□□□□□ -0.27
CHKB-206ENST00000471515 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHKB-206ENST00000471515 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.28
CHKB-206ENST00000471515 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
CHKB-206ENST00000471515 HDGFP51858 240 aaKnown RBP13.31□□□□□ -0.28
CHKB-206ENST00000471515 NUTM2DQ5VT03 806 aaPredicted RBP13.31□□□□□ -0.28
CHKB-206ENST00000471515 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
CHKB-206ENST00000471515 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
CHKB-206ENST00000471515 PPP1R15AO75807 674 aaPredicted RBP13.3□□□□□ -0.28
CHKB-206ENST00000471515 MSH6P52701 1360 aa13.3□□□□□ -0.28
CHKB-206ENST00000471515 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
CHKB-206ENST00000471515 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
CHKB-206ENST00000471515 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
CHKB-206ENST00000471515 METP08581 1390 aa13.28□□□□□ -0.28
CHKB-206ENST00000471515 COL16A1Q07092 1604 aaPredicted RBP13.28□□□□□ -0.28
CHKB-206ENST00000471515 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
CHKB-206ENST00000471515 DCCP43146 1447 aa13.26□□□□□ -0.29
CHKB-206ENST00000471515 PRAG1Q86YV5 1406 aa13.26□□□□□ -0.29
CHKB-206ENST00000471515 BCANQ96GW7 911 aa13.26□□□□□ -0.29
CHKB-206ENST00000471515 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
CHKB-206ENST00000471515 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
CHKB-206ENST00000471515 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
CHKB-206ENST00000471515 C19orf44Q9H6X5 657 aa13.24□□□□□ -0.29
CHKB-206ENST00000471515 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
CHKB-206ENST00000471515 MST1RQ04912 1400 aa13.22□□□□□ -0.29
CHKB-206ENST00000471515 KIF1BO60333 1816 aa13.21□□□□□ -0.29
CHKB-206ENST00000471515 CADPS2Q86UW7 1296 aa13.21□□□□□ -0.29
CHKB-206ENST00000471515 LRP6O75581 1613 aa13.21□□□□□ -0.3
CHKB-206ENST00000471515 JCADQ9P266 1359 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 NALCNQ8IZF0 1738 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 PPLO60437 1756 aa13.2□□□□□ -0.3
CHKB-206ENST00000471515 ASXL1Q8IXJ9 1541 aa13.19□□□□□ -0.3
CHKB-206ENST00000471515 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CHKB-206ENST00000471515 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CHKB-206ENST00000471515 POTEAQ6S8J7 498 aa13.18□□□□□ -0.3
CHKB-206ENST00000471515 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
CHKB-206ENST00000471515 NHSL1Q5SYE7 1610 aa13.17□□□□□ -0.3
CHKB-206ENST00000471515 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
CHKB-206ENST00000471515 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
CHKB-206ENST00000471515 LAMC1P11047 1609 aa13.17□□□□□ -0.3
CHKB-206ENST00000471515 RPGRIP1LQ68CZ1 1315 aa13.16□□□□□ -0.3
CHKB-206ENST00000471515 ATF3P18847 181 aa13.16□□□□□ -0.3
CHKB-206ENST00000471515 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
CHKB-206ENST00000471515 FOXD1Q16676 465 aa13.15□□□□□ -0.3
CHKB-206ENST00000471515 TRIM52Q96A61 297 aa13.15□□□□□ -0.3
CHKB-206ENST00000471515 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
CHKB-206ENST00000471515 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
CHKB-206ENST00000471515 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
CHKB-206ENST00000471515 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
CHKB-206ENST00000471515 TECPR2O15040 1411 aa13.13□□□□□ -0.31
CHKB-206ENST00000471515 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CHKB-206ENST00000471515 MPHOSPH9Q99550 1183 aa13.12□□□□□ -0.31
CHKB-206ENST00000471515 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
CHKB-206ENST00000471515 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
CHKB-206ENST00000471515 PIK3C2GO75747 1445 aa13.11□□□□□ -0.31
CHKB-206ENST00000471515 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
CHKB-206ENST00000471515 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
CHKB-206ENST00000471515 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.31
CHKB-206ENST00000471515 ANKRD30BQ9BXX2 1392 aa13.08□□□□□ -0.31
CHKB-206ENST00000471515 DDX17Q92841 729 aaKnown RBP13.08□□□□□ -0.32
CHKB-206ENST00000471515 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
CHKB-206ENST00000471515 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
CHKB-206ENST00000471515 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
CHKB-206ENST00000471515 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
CHKB-206ENST00000471515 MYOM2P54296 1465 aa13.05□□□□□ -0.32
CHKB-206ENST00000471515 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
CHKB-206ENST00000471515 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
CHKB-206ENST00000471515 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
CHKB-206ENST00000471515 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
CHKB-206ENST00000471515 PXDNQ92626 1479 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms