RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 CCDC144AA2RUR9 1427 aa26.17■■□□□ 1.78
VPS72-204ENST00000471423 ZNF326Q5BKZ1 582 aaKnown RBP26.12■■□□□ 1.77
VPS72-204ENST00000471423 PPP1R15AO75807 674 aaPredicted RBP26.11■■□□□ 1.77
VPS72-204ENST00000471423 NUTM2DQ5VT03 806 aaPredicted RBP26.1■■□□□ 1.77
VPS72-204ENST00000471423 ZNF335Q9H4Z2 1342 aaPredicted RBP26.1■■□□□ 1.77
VPS72-204ENST00000471423 HDGFP51858 240 aaKnown RBP26.09■■□□□ 1.77
VPS72-204ENST00000471423 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.09■■□□□ 1.77
VPS72-204ENST00000471423 NEXMIFQ5QGS0 1516 aa26.09■■□□□ 1.77
VPS72-204ENST00000471423 ANKRD30BQ9BXX2 1392 aa26.07■■□□□ 1.76
VPS72-204ENST00000471423 PLEKHG1Q9ULL1 1385 aa26.07■■□□□ 1.76
VPS72-204ENST00000471423 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
VPS72-204ENST00000471423 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
VPS72-204ENST00000471423 SPATA31E1Q6ZUB1 1445 aa26.05■■□□□ 1.76
VPS72-204ENST00000471423 BCANQ96GW7 911 aa26.04■■□□□ 1.76
VPS72-204ENST00000471423 SLC26A8Q96RN1 970 aa26.02■■□□□ 1.76
VPS72-204ENST00000471423 PPLO60437 1756 aa26■■□□□ 1.75
VPS72-204ENST00000471423 RGL3Q3MIN7 710 aa25.99■■□□□ 1.75
VPS72-204ENST00000471423 RPGRIP1LQ68CZ1 1315 aa25.98■■□□□ 1.75
VPS72-204ENST00000471423 NRXN3Q9Y4C0 1643 aa25.97■■□□□ 1.75
VPS72-204ENST00000471423 SETBP1Q9Y6X0 1596 aa25.97■■□□□ 1.75
VPS72-204ENST00000471423 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
VPS72-204ENST00000471423 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
VPS72-204ENST00000471423 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
VPS72-204ENST00000471423 IFT172Q9UG01 1749 aa25.96■■□□□ 1.75
VPS72-204ENST00000471423 DIP2AQ14689 1571 aa25.95■■□□□ 1.75
VPS72-204ENST00000471423 CPS1P31327 1500 aa25.95■■□□□ 1.74
VPS72-204ENST00000471423 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.74
VPS72-204ENST00000471423 DHX57Q6P158 1386 aaKnown RBP25.95■■□□□ 1.74
VPS72-204ENST00000471423 VGFO15240 615 aaPredicted RBP25.92■■□□□ 1.74
VPS72-204ENST00000471423 TBX22Q9Y458 520 aa25.91■■□□□ 1.74
VPS72-204ENST00000471423 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
VPS72-204ENST00000471423 ADGRF5Q8IZF2 1346 aa25.87■■□□□ 1.73
VPS72-204ENST00000471423 KCNA6P17658 529 aa25.86■■□□□ 1.73
VPS72-204ENST00000471423 CHD2O14647 1828 aaKnown RBP25.86■■□□□ 1.73
VPS72-204ENST00000471423 IQSEC2Q5JU85 1478 aa25.85■■□□□ 1.73
VPS72-204ENST00000471423 LRRC7Q96NW7 1537 aa25.85■■□□□ 1.73
VPS72-204ENST00000471423 SETD1AO15047 1707 aaKnown RBP25.84■■□□□ 1.73
VPS72-204ENST00000471423 MYOM2P54296 1465 aa25.84■■□□□ 1.73
VPS72-204ENST00000471423 PIK3R4Q99570 1358 aa25.83■■□□□ 1.73
VPS72-204ENST00000471423 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
VPS72-204ENST00000471423 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
VPS72-204ENST00000471423 METP08581 1390 aa25.82■■□□□ 1.72
VPS72-204ENST00000471423 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
VPS72-204ENST00000471423 PTPRUQ92729 1446 aa25.8■■□□□ 1.72
VPS72-204ENST00000471423 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
VPS72-204ENST00000471423 XRN1Q8IZH2 1706 aaKnown RBP25.77■■□□□ 1.72
VPS72-204ENST00000471423 SIN3AQ96ST3 1273 aa25.77■■□□□ 1.72
VPS72-204ENST00000471423 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
VPS72-204ENST00000471423 DCAF11Q8TEB1 546 aa25.76■■□□□ 1.71
VPS72-204ENST00000471423 AMOTL2Q9Y2J4 779 aa25.75■■□□□ 1.71
VPS72-204ENST00000471423 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
VPS72-204ENST00000471423 PROSER2Q86WR7 435 aaPredicted RBP25.74■■□□□ 1.71
VPS72-204ENST00000471423 FBXO41Q8TF61 875 aa25.74■■□□□ 1.71
VPS72-204ENST00000471423 KDM2AQ9Y2K7 1162 aa25.74■■□□□ 1.71
VPS72-204ENST00000471423 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
VPS72-204ENST00000471423 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
VPS72-204ENST00000471423 ASXL1Q8IXJ9 1541 aa25.72■■□□□ 1.71
VPS72-204ENST00000471423 LAMC1P11047 1609 aa25.71■■□□□ 1.71
VPS72-204ENST00000471423 STAC3Q96MF2 364 aa25.68■■□□□ 1.7
VPS72-204ENST00000471423 C14orf93Q9H972 538 aaKnown RBP25.67■■□□□ 1.7
VPS72-204ENST00000471423 UBAP1LF5GYI3 381 aa25.66■■□□□ 1.7
VPS72-204ENST00000471423 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
VPS72-204ENST00000471423 ILDR1Q86SU0 546 aaPredicted RBP25.66■■□□□ 1.7
VPS72-204ENST00000471423 TMEM132EQ6IEE7 984 aa25.65■■□□□ 1.7
VPS72-204ENST00000471423 PTCH1Q13635 1447 aa25.64■■□□□ 1.7
VPS72-204ENST00000471423 PRAG1Q86YV5 1406 aa25.64■■□□□ 1.7
VPS72-204ENST00000471423 L3MBTL2Q969R5 705 aa25.64■■□□□ 1.7
VPS72-204ENST00000471423 ROBO2Q9HCK4 1378 aa25.62■■□□□ 1.69
VPS72-204ENST00000471423 NCOA3Q9Y6Q9 1424 aa25.62■■□□□ 1.69
VPS72-204ENST00000471423 MSH6P52701 1360 aa25.61■■□□□ 1.69
VPS72-204ENST00000471423 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
VPS72-204ENST00000471423 TOM1O60784 492 aa25.6■■□□□ 1.69
VPS72-204ENST00000471423 C14orf37Q86TY3 774 aa25.6■■□□□ 1.69
VPS72-204ENST00000471423 YTHDC2Q9H6S0 1430 aaKnown RBP25.6■■□□□ 1.69
VPS72-204ENST00000471423 ADGRB1O14514 1584 aa25.6■■□□□ 1.69
VPS72-204ENST00000471423 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
VPS72-204ENST00000471423 STK26Q9P289 416 aa25.59■■□□□ 1.69
VPS72-204ENST00000471423 TECPR2O15040 1411 aa25.59■■□□□ 1.69
VPS72-204ENST00000471423 ABCC11Q96J66 1382 aa25.56■■□□□ 1.68
VPS72-204ENST00000471423 NALCNQ8IZF0 1738 aa25.56■■□□□ 1.68
VPS72-204ENST00000471423 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
VPS72-204ENST00000471423 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.55■■□□□ 1.68
VPS72-204ENST00000471423 PIP4K2BP78356 416 aa25.55■■□□□ 1.68
VPS72-204ENST00000471423 SCAF1Q9H7N4 1312 aaKnown RBP25.55■■□□□ 1.68
VPS72-204ENST00000471423 KIAA1210Q9ULL0 1709 aa25.54■■□□□ 1.68
VPS72-204ENST00000471423 ADGRL3Q9HAR2 1447 aa25.54■■□□□ 1.68
VPS72-204ENST00000471423 C19orf44Q9H6X5 657 aa25.52■■□□□ 1.68
VPS72-204ENST00000471423 DCCP43146 1447 aa25.5■■□□□ 1.67
VPS72-204ENST00000471423 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
VPS72-204ENST00000471423 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
VPS72-204ENST00000471423 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
VPS72-204ENST00000471423 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
VPS72-204ENST00000471423 DLC1Q96QB1 1528 aa25.48■■□□□ 1.67
VPS72-204ENST00000471423 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
VPS72-204ENST00000471423 ATF3P18847 181 aa25.47■■□□□ 1.67
VPS72-204ENST00000471423 TRPM1Q7Z4N2 1603 aa25.47■■□□□ 1.67
VPS72-204ENST00000471423 CADPS2Q86UW7 1296 aa25.46■■□□□ 1.67
VPS72-204ENST00000471423 TRAK1Q9UPV9 953 aa25.46■■□□□ 1.67
VPS72-204ENST00000471423 NBPF1Q3BBV0 1214 aa25.45■■□□□ 1.66
VPS72-204ENST00000471423 ROBO1Q9Y6N7 1651 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms