RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 CDC42BPAQ5VT25 1732 aa4.53□□□□□ -1.68
CCNL1-214ENST00000471247 RIMBP2O15034 1052 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 TK2O00142 265 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 PARP9Q8IXQ6 854 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 BHMG1C9JSJ3 638 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-214ENST00000471247 LAPTM4BQ86VI4 370 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 BANK1Q8NDB2 785 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 MAGI3Q5TCQ9 1506 aa4.52□□□□□ -1.69
CCNL1-214ENST00000471247 FAM217BQ9NTX9 383 aaPredicted RBP4.51□□□□□ -1.69
CCNL1-214ENST00000471247 CADPSQ9ULU8 1353 aa4.51□□□□□ -1.69
CCNL1-214ENST00000471247 EFCAB5A4FU69 1503 aa4.51□□□□□ -1.69
CCNL1-214ENST00000471247 NESP48681 1621 aa4.51□□□□□ -1.69
CCNL1-214ENST00000471247 SOGA1O94964 1423 aa4.51□□□□□ -1.69
CCNL1-214ENST00000471247 CLCN1P35523 988 aa4.5□□□□□ -1.69
CCNL1-214ENST00000471247 PPP4R3BQ5MIZ7 849 aa4.5□□□□□ -1.69
CCNL1-214ENST00000471247 FGD5Q6ZNL6 1462 aa4.5□□□□□ -1.69
CCNL1-214ENST00000471247 METTL3Q86U44 580 aaKnown RBP4.5□□□□□ -1.69
CCNL1-214ENST00000471247 GPCPD1Q9NPB8 672 aa4.5□□□□□ -1.69
CCNL1-214ENST00000471247 ABCA8O94911 1581 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 A6NJR5 290 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 FECHP22830 423 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 SKIV2LQ15477 1246 aaKnown RBP4.49□□□□□ -1.69
CCNL1-214ENST00000471247 PPARGC1BQ86YN6 1023 aaKnown RBP4.49□□□□□ -1.69
CCNL1-214ENST00000471247 ADAM33Q9BZ11 813 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 CDHR5Q9HBB8 845 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 GRIN2BQ13224 1484 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 PPRC1Q5VV67 1664 aaKnown RBP4.49□□□□□ -1.69
CCNL1-214ENST00000471247 CDC42BPBQ9Y5S2 1711 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 PHOX2BQ99453 314 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 DENND4BO75064 1496 aaPredicted RBP4.49□□□□□ -1.69
CCNL1-214ENST00000471247 FANCD2Q9BXW9 1451 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 KIAA0556O60303 1618 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 TRIM6-TRIM34B2RNG4 842 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 DIXDC1Q155Q3 683 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 FAM198AQ9UFP1 575 aa4.49□□□□□ -1.69
CCNL1-214ENST00000471247 PCF11O94913 1555 aaKnown RBP4.48□□□□□ -1.69
CCNL1-214ENST00000471247 IFT172Q9UG01 1749 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 DISP1Q96F81 1524 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 DEPDC5O75140 1603 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 CD46P15529 392 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 KHSRPQ92945 711 aaKnown RBP eCLIP4.48□□□□□ -1.693e-9■■■□□ 16.9
CCNL1-214ENST00000471247 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.48□□□□□ -1.69
CCNL1-214ENST00000471247 LHX6Q9UPM6 363 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 TIAM1Q13009 1591 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 ZNF687Q8N1G0 1237 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 ZBED2Q9BTP6 218 aa4.48□□□□□ -1.69
CCNL1-214ENST00000471247 REPIN1Q9BWE0 567 aaKnown RBP4.48□□□□□ -1.69
CCNL1-214ENST00000471247 ARHGAP35Q9NRY4 1499 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 MS4A1P11836 297 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 SPTLC1O15269 473 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 PRPF38BQ5VTL8 546 aaKnown RBP4.47□□□□□ -1.69
CCNL1-214ENST00000471247 ADGBQ8N7X0 1667 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 RAPGEF2Q9Y4G8 1499 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 COL9A1P20849 921 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 ARSIQ5FYB1 569 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 RSPH6AQ9H0K4 717 aa4.47□□□□□ -1.69
CCNL1-214ENST00000471247 PCGF6Q9BYE7 350 aa4.46□□□□□ -1.7
CCNL1-214ENST00000471247 NUP160Q12769 1436 aa4.46□□□□□ -1.7
CCNL1-214ENST00000471247 GRXCR2A6NFK2 248 aa4.46□□□□□ -1.7
CCNL1-214ENST00000471247 FLIIQ13045 1269 aa4.46□□□□□ -1.7
CCNL1-214ENST00000471247 TSR1Q2NL82 804 aaKnown RBP4.45□□□□□ -1.7
CCNL1-214ENST00000471247 PADI6Q6TGC4 694 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 TNIKQ9UKE5 1360 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 NEUROD2Q15784 382 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-214ENST00000471247 GIGYF2Q6Y7W6 1299 aaKnown RBP4.45□□□□□ -1.7
CCNL1-214ENST00000471247 DDX12PQ92771 950 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 MRC2Q9UBG0 1479 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 HRO43593 1189 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 POTEEQ6S8J3 1075 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 CDCA7LQ96GN5 454 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 TMEM134Q9H6X4 195 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 MAST1Q9Y2H9 1570 aa4.45□□□□□ -1.7
CCNL1-214ENST00000471247 TCOF1Q13428 1488 aaKnown RBP4.44□□□□□ -1.7
CCNL1-214ENST00000471247 PTPREP23469 700 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 USP46P62068 366 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 LHX8Q68G74 356 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 RBM46Q8TBY0 533 aaKnown RBP4.44□□□□□ -1.7
CCNL1-214ENST00000471247 TSKSQ9UJT2 592 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 NEURL4Q96JN8 1562 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 ARHGAP33O14559 1287 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 UPF1Q92900 1129 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCNL1-214ENST00000471247 FAM117AQ9C073 453 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 CEP164Q9UPV0 1460 aa4.44□□□□□ -1.7
CCNL1-214ENST00000471247 FNBP4Q8N3X1 1017 aaPredicted RBP4.43□□□□□ -1.7
CCNL1-214ENST00000471247 RABGEF1Q9UJ41 708 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 SIGLEC1Q9BZZ2 1709 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 IGF1RP08069 1367 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 CEP152O94986 1710 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 NUTM2FA1L443 756 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 DNAJB2P25686 324 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 KRI1Q8N9T8 703 aaKnown RBP4.43□□□□□ -1.7
CCNL1-214ENST00000471247 TIMELESSQ9UNS1 1208 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 SALL2Q9Y467 1007 aaPredicted RBP4.43□□□□□ -1.7
CCNL1-214ENST00000471247 ABCA9Q8IUA7 1624 aa4.43□□□□□ -1.7
CCNL1-214ENST00000471247 NBPF26B4DH59 902 aa4.42□□□□□ -1.7
CCNL1-214ENST00000471247 TTBK1Q5TCY1 1321 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-214ENST00000471247 HECW1Q76N89 1606 aa4.42□□□□□ -1.7
CCNL1-214ENST00000471247 RRBP1Q9P2E9 1410 aaKnown RBP4.42□□□□□ -1.7
CCNL1-214ENST00000471247 TATDN2Q93075 761 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms