RNA–Protein interactions for RNA: ENST00000470518.5

SGSM3-208, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-208ENST00000470518 EID1Q9Y6B2 187 aa20.77■□□□□ 0.92
SGSM3-208ENST00000470518 ROBO1Q9Y6N7 1651 aa20.77■□□□□ 0.91
SGSM3-208ENST00000470518 PLEKHG1Q9ULL1 1385 aa20.74■□□□□ 0.91
SGSM3-208ENST00000470518 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
SGSM3-208ENST00000470518 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
SGSM3-208ENST00000470518 RIMS2Q9UQ26 1411 aa20.74■□□□□ 0.91
SGSM3-208ENST00000470518 ADAMTS13Q76LX8 1427 aa20.72■□□□□ 0.91
SGSM3-208ENST00000470518 NRXN3Q9Y4C0 1643 aa20.72■□□□□ 0.91
SGSM3-208ENST00000470518 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
SGSM3-208ENST00000470518 KCNA6P17658 529 aa20.71■□□□□ 0.91
SGSM3-208ENST00000470518 SPHKAPQ2M3C7 1700 aa20.7■□□□□ 0.9
SGSM3-208ENST00000470518 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
SGSM3-208ENST00000470518 DIP2AQ14689 1571 aa20.69■□□□□ 0.9
SGSM3-208ENST00000470518 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
SGSM3-208ENST00000470518 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SGSM3-208ENST00000470518 XRN1Q8IZH2 1706 aaKnown RBP20.65■□□□□ 0.9
SGSM3-208ENST00000470518 COL16A1Q07092 1604 aaPredicted RBP20.64■□□□□ 0.89
SGSM3-208ENST00000470518 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
SGSM3-208ENST00000470518 CLTCL1P53675 1640 aa20.63■□□□□ 0.89
SGSM3-208ENST00000470518 RGS17Q9UGC6 210 aaPredicted RBP20.62■□□□□ 0.89
SGSM3-208ENST00000470518 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
SGSM3-208ENST00000470518 PTPRUQ92729 1446 aa20.61■□□□□ 0.89
SGSM3-208ENST00000470518 NUP155O75694 1391 aa20.61■□□□□ 0.89
SGSM3-208ENST00000470518 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
SGSM3-208ENST00000470518 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
SGSM3-208ENST00000470518 PHLPP1O60346 1717 aa20.6■□□□□ 0.89
SGSM3-208ENST00000470518 PROSER2Q86WR7 435 aaPredicted RBP20.59■□□□□ 0.89
SGSM3-208ENST00000470518 TRPM2O94759 1503 aa20.58■□□□□ 0.89
SGSM3-208ENST00000470518 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.88
SGSM3-208ENST00000470518 NAIPQ13075 1403 aa20.56■□□□□ 0.88
SGSM3-208ENST00000470518 NUTM2DQ5VT03 806 aaPredicted RBP20.56■□□□□ 0.88
SGSM3-208ENST00000470518 TBX22Q9Y458 520 aa20.56■□□□□ 0.88
SGSM3-208ENST00000470518 MSH6P52701 1360 aa20.56■□□□□ 0.88
SGSM3-208ENST00000470518 SETD1AO15047 1707 aaKnown RBP20.56■□□□□ 0.88
SGSM3-208ENST00000470518 ITGAEP38570 1179 aa20.55■□□□□ 0.88
SGSM3-208ENST00000470518 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
SGSM3-208ENST00000470518 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
SGSM3-208ENST00000470518 NCOA3Q9Y6Q9 1424 aa20.54■□□□□ 0.88
SGSM3-208ENST00000470518 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
SGSM3-208ENST00000470518 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
SGSM3-208ENST00000470518 LRP6O75581 1613 aa20.52■□□□□ 0.88
SGSM3-208ENST00000470518 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
SGSM3-208ENST00000470518 CHGAP10645 457 aaKnown RBP20.5■□□□□ 0.87
SGSM3-208ENST00000470518 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
SGSM3-208ENST00000470518 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
SGSM3-208ENST00000470518 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SGSM3-208ENST00000470518 BCANQ96GW7 911 aa20.48■□□□□ 0.87
SGSM3-208ENST00000470518 METP08581 1390 aa20.46■□□□□ 0.87
SGSM3-208ENST00000470518 NHSL1Q5SYE7 1610 aa20.46■□□□□ 0.87
SGSM3-208ENST00000470518 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
SGSM3-208ENST00000470518 KIF1BO60333 1816 aa20.46■□□□□ 0.87
SGSM3-208ENST00000470518 DCCP43146 1447 aa20.45■□□□□ 0.86
SGSM3-208ENST00000470518 POTEAQ6S8J7 498 aa20.45■□□□□ 0.86
SGSM3-208ENST00000470518 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
SGSM3-208ENST00000470518 HDGFP51858 240 aaKnown RBP20.43■□□□□ 0.86
SGSM3-208ENST00000470518 JCADQ9P266 1359 aa20.43■□□□□ 0.86
SGSM3-208ENST00000470518 MST1RQ04912 1400 aa20.43■□□□□ 0.86
SGSM3-208ENST00000470518 PPLO60437 1756 aa20.41■□□□□ 0.86
SGSM3-208ENST00000470518 AMOTL2Q9Y2J4 779 aa20.41■□□□□ 0.86
SGSM3-208ENST00000470518 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
SGSM3-208ENST00000470518 ADGRL3Q9HAR2 1447 aa20.39■□□□□ 0.85
SGSM3-208ENST00000470518 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
SGSM3-208ENST00000470518 LAMC1P11047 1609 aa20.38■□□□□ 0.85
SGSM3-208ENST00000470518 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
SGSM3-208ENST00000470518 BRINP3Q76B58 766 aa20.36■□□□□ 0.85
SGSM3-208ENST00000470518 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
SGSM3-208ENST00000470518 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
SGSM3-208ENST00000470518 SETD5Q9C0A6 1442 aa20.32■□□□□ 0.84
SGSM3-208ENST00000470518 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
SGSM3-208ENST00000470518 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
SGSM3-208ENST00000470518 ATF3P18847 181 aa20.3■□□□□ 0.84
SGSM3-208ENST00000470518 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
SGSM3-208ENST00000470518 SPATA31A6Q5VVP1 1343 aa20.29■□□□□ 0.84
SGSM3-208ENST00000470518 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.84
SGSM3-208ENST00000470518 C1orf167Q5SNV9 1468 aa20.26■□□□□ 0.83
SGSM3-208ENST00000470518 CDC42BPGQ6DT37 1551 aa20.25■□□□□ 0.83
SGSM3-208ENST00000470518 KNDC1Q76NI1 1749 aa20.24■□□□□ 0.83
SGSM3-208ENST00000470518 PNPLA6Q8IY17 1366 aa20.23■□□□□ 0.83
SGSM3-208ENST00000470518 DDX17Q92841 729 aaKnown RBP20.23■□□□□ 0.83
SGSM3-208ENST00000470518 EP400Q96L91 3159 aa20.22■□□□□ 0.83
SGSM3-208ENST00000470518 FOXD1Q16676 465 aa20.22■□□□□ 0.83
SGSM3-208ENST00000470518 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
SGSM3-208ENST00000470518 COL22A1Q8NFW1 1626 aaPredicted RBP20.2■□□□□ 0.82
SGSM3-208ENST00000470518 TECPR2O15040 1411 aa20.19■□□□□ 0.82
SGSM3-208ENST00000470518 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
SGSM3-208ENST00000470518 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
SGSM3-208ENST00000470518 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
SGSM3-208ENST00000470518 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
SGSM3-208ENST00000470518 ADGRF5Q8IZF2 1346 aa20.17■□□□□ 0.82
SGSM3-208ENST00000470518 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
SGSM3-208ENST00000470518 CCDC144AA2RUR9 1427 aa20.16■□□□□ 0.82
SGSM3-208ENST00000470518 CDK12Q9NYV4 1490 aaPredicted RBP20.16■□□□□ 0.82
SGSM3-208ENST00000470518 PXDNQ92626 1479 aa20.15■□□□□ 0.82
SGSM3-208ENST00000470518 FMN2Q9NZ56 1722 aa20.14■□□□□ 0.81
SGSM3-208ENST00000470518 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
SGSM3-208ENST00000470518 SOS2Q07890 1332 aaPredicted RBP20.13■□□□□ 0.81
SGSM3-208ENST00000470518 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
SGSM3-208ENST00000470518 RGS12O14924 1447 aa20.12■□□□□ 0.81
SGSM3-208ENST00000470518 AFF2P51816 1311 aa20.12■□□□□ 0.81
SGSM3-208ENST00000470518 MYOM2P54296 1465 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms