RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 SETD5Q9C0A6 1442 aa16.13■□□□□ 0.17
RFTN1-208ENST00000470458 TOM1O60784 492 aa16.13■□□□□ 0.17
RFTN1-208ENST00000470458 KIF1BO60333 1816 aa16.12■□□□□ 0.17
RFTN1-208ENST00000470458 PLEKHG1Q9ULL1 1385 aa16.11■□□□□ 0.17
RFTN1-208ENST00000470458 RIMS2Q9UQ26 1411 aa16.11■□□□□ 0.17
RFTN1-208ENST00000470458 TRPM2O94759 1503 aa16.1■□□□□ 0.17
RFTN1-208ENST00000470458 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
RFTN1-208ENST00000470458 KCNA6P17658 529 aa16.09■□□□□ 0.17
RFTN1-208ENST00000470458 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
RFTN1-208ENST00000470458 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
RFTN1-208ENST00000470458 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
RFTN1-208ENST00000470458 MYO5BQ9ULV0 1848 aa16.09■□□□□ 0.17
RFTN1-208ENST00000470458 PIK3R4Q99570 1358 aa16.08■□□□□ 0.16
RFTN1-208ENST00000470458 ZFYVE9O95405 1425 aa16.08■□□□□ 0.16
RFTN1-208ENST00000470458 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
RFTN1-208ENST00000470458 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
RFTN1-208ENST00000470458 DIP2AQ14689 1571 aa16.05■□□□□ 0.16
RFTN1-208ENST00000470458 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
RFTN1-208ENST00000470458 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
RFTN1-208ENST00000470458 NKTRP30414 1462 aaKnown RBP16.02■□□□□ 0.15
RFTN1-208ENST00000470458 PROSER2Q86WR7 435 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-208ENST00000470458 NCOA3Q9Y6Q9 1424 aa16.01■□□□□ 0.15
RFTN1-208ENST00000470458 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
RFTN1-208ENST00000470458 CLTCL1P53675 1640 aa16■□□□□ 0.15
RFTN1-208ENST00000470458 LRRC7Q96NW7 1537 aa15.99■□□□□ 0.15
RFTN1-208ENST00000470458 CHD2O14647 1828 aaKnown RBP15.99■□□□□ 0.15
RFTN1-208ENST00000470458 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
RFTN1-208ENST00000470458 ANKRD30BQ9BXX2 1392 aa15.97■□□□□ 0.15
RFTN1-208ENST00000470458 STRCP1A6NGW2 1772 aa15.96■□□□□ 0.15
RFTN1-208ENST00000470458 NWD1Q149M9 1564 aa15.96■□□□□ 0.14
RFTN1-208ENST00000470458 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.14
RFTN1-208ENST00000470458 MSH6P52701 1360 aa15.95■□□□□ 0.14
RFTN1-208ENST00000470458 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
RFTN1-208ENST00000470458 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
RFTN1-208ENST00000470458 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
RFTN1-208ENST00000470458 TMEM94Q12767 1356 aa15.93■□□□□ 0.14
RFTN1-208ENST00000470458 NEXMIFQ5QGS0 1516 aa15.93■□□□□ 0.14
RFTN1-208ENST00000470458 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
RFTN1-208ENST00000470458 AMOTL2Q9Y2J4 779 aa15.92■□□□□ 0.14
RFTN1-208ENST00000470458 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
RFTN1-208ENST00000470458 PPLO60437 1756 aa15.9■□□□□ 0.14
RFTN1-208ENST00000470458 FOXD1Q16676 465 aa15.9■□□□□ 0.14
RFTN1-208ENST00000470458 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
RFTN1-208ENST00000470458 C19orf44Q9H6X5 657 aa15.9■□□□□ 0.14
RFTN1-208ENST00000470458 ATF3P18847 181 aa15.89■□□□□ 0.13
RFTN1-208ENST00000470458 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
RFTN1-208ENST00000470458 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
RFTN1-208ENST00000470458 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
RFTN1-208ENST00000470458 SPATA31E1Q6ZUB1 1445 aa15.87■□□□□ 0.13
RFTN1-208ENST00000470458 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
RFTN1-208ENST00000470458 NRXN3Q9Y4C0 1643 aa15.84■□□□□ 0.13
RFTN1-208ENST00000470458 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
RFTN1-208ENST00000470458 DCCP43146 1447 aa15.84■□□□□ 0.13
RFTN1-208ENST00000470458 ALKQ9UM73 1620 aa15.83■□□□□ 0.13
RFTN1-208ENST00000470458 TRIM26Q12899 539 aaPredicted RBP15.82■□□□□ 0.12
RFTN1-208ENST00000470458 METP08581 1390 aa15.82■□□□□ 0.12
RFTN1-208ENST00000470458 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
RFTN1-208ENST00000470458 PRAG1Q86YV5 1406 aa15.81■□□□□ 0.12
RFTN1-208ENST00000470458 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
RFTN1-208ENST00000470458 LAMC1P11047 1609 aa15.8■□□□□ 0.12
RFTN1-208ENST00000470458 MYOM2P54296 1465 aa15.8■□□□□ 0.12
RFTN1-208ENST00000470458 PTCH1Q13635 1447 aa15.8■□□□□ 0.12
RFTN1-208ENST00000470458 HSPA1LP34931 641 aa15.8■□□□□ 0.12
RFTN1-208ENST00000470458 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
RFTN1-208ENST00000470458 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
RFTN1-208ENST00000470458 PTPRUQ92729 1446 aa15.78■□□□□ 0.12
RFTN1-208ENST00000470458 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
RFTN1-208ENST00000470458 ADGRF5Q8IZF2 1346 aa15.78■□□□□ 0.12
RFTN1-208ENST00000470458 PIK3C2GO75747 1445 aa15.77■□□□□ 0.12
RFTN1-208ENST00000470458 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.77■□□□□ 0.12
RFTN1-208ENST00000470458 ABCC11Q96J66 1382 aa15.76■□□□□ 0.11
RFTN1-208ENST00000470458 SETD1AO15047 1707 aaKnown RBP15.76■□□□□ 0.11
RFTN1-208ENST00000470458 ADGRL3Q9HAR2 1447 aa15.76■□□□□ 0.11
RFTN1-208ENST00000470458 LRPPRCP42704 1394 aaKnown RBP15.75■□□□□ 0.11
RFTN1-208ENST00000470458 DCAF11Q8TEB1 546 aa15.75■□□□□ 0.11
RFTN1-208ENST00000470458 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
RFTN1-208ENST00000470458 NRXN1Q9ULB1 1477 aa15.74■□□□□ 0.11
RFTN1-208ENST00000470458 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
RFTN1-208ENST00000470458 TECPR2O15040 1411 aa15.73■□□□□ 0.11
RFTN1-208ENST00000470458 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.1
RFTN1-208ENST00000470458 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
RFTN1-208ENST00000470458 STK26Q9P289 416 aa15.7■□□□□ 0.1
RFTN1-208ENST00000470458 KDM2AQ9Y2K7 1162 aa15.7■□□□□ 0.1
RFTN1-208ENST00000470458 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
RFTN1-208ENST00000470458 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
RFTN1-208ENST00000470458 CFAP70Q5T0N1 1121 aa15.68■□□□□ 0.1
RFTN1-208ENST00000470458 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
RFTN1-208ENST00000470458 JCADQ9P266 1359 aa15.67■□□□□ 0.1
RFTN1-208ENST00000470458 TMEM132EQ6IEE7 984 aa15.67■□□□□ 0.1
RFTN1-208ENST00000470458 POGKQ9P215 609 aa15.67■□□□□ 0.1
RFTN1-208ENST00000470458 LRRC59Q96AG4 307 aaKnown RBP15.66■□□□□ 0.1
RFTN1-208ENST00000470458 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
RFTN1-208ENST00000470458 MST1RQ04912 1400 aa15.66■□□□□ 0.1
RFTN1-208ENST00000470458 NALCNQ8IZF0 1738 aa15.65■□□□□ 0.1
RFTN1-208ENST00000470458 EIF3AQ14152 1382 aaKnown RBP15.65■□□□□ 0.1
RFTN1-208ENST00000470458 BRINP3Q76B58 766 aa15.65■□□□□ 0.1
RFTN1-208ENST00000470458 KIAA1210Q9ULL0 1709 aa15.65■□□□□ 0.1
RFTN1-208ENST00000470458 SPATA31A6Q5VVP1 1343 aa15.65■□□□□ 0.1
RFTN1-208ENST00000470458 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
RFTN1-208ENST00000470458 DLC1Q96QB1 1528 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms