RNA–Protein interactions for RNA: ENST00000470318.1

TSPAN1-204, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 590 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-204ENST00000470318 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
TSPAN1-204ENST00000470318 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
TSPAN1-204ENST00000470318 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
TSPAN1-204ENST00000470318 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
TSPAN1-204ENST00000470318 PLEKHG1Q9ULL1 1385 aa22.93■■□□□ 1.26
TSPAN1-204ENST00000470318 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
TSPAN1-204ENST00000470318 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
TSPAN1-204ENST00000470318 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
TSPAN1-204ENST00000470318 NWD1Q149M9 1564 aa22.89■■□□□ 1.25
TSPAN1-204ENST00000470318 PPP1R15AO75807 674 aaPredicted RBP22.88■■□□□ 1.25
TSPAN1-204ENST00000470318 MPHOSPH9Q99550 1183 aa22.88■■□□□ 1.25
TSPAN1-204ENST00000470318 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
TSPAN1-204ENST00000470318 CHD2O14647 1828 aaKnown RBP22.87■■□□□ 1.25
TSPAN1-204ENST00000470318 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
TSPAN1-204ENST00000470318 XIRP1Q702N8 1843 aaKnown RBP22.85■■□□□ 1.25
TSPAN1-204ENST00000470318 SETBP1Q9Y6X0 1596 aa22.84■■□□□ 1.25
TSPAN1-204ENST00000470318 PPLO60437 1756 aa22.84■■□□□ 1.25
TSPAN1-204ENST00000470318 NRXN3Q9Y4C0 1643 aa22.83■■□□□ 1.25
TSPAN1-204ENST00000470318 HRCP23327 699 aa22.83■■□□□ 1.25
TSPAN1-204ENST00000470318 CCDC144AA2RUR9 1427 aa22.82■■□□□ 1.24
TSPAN1-204ENST00000470318 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
TSPAN1-204ENST00000470318 SLC26A8Q96RN1 970 aa22.82■■□□□ 1.24
TSPAN1-204ENST00000470318 ADAMTS13Q76LX8 1427 aa22.82■■□□□ 1.24
TSPAN1-204ENST00000470318 FOXD1Q16676 465 aa22.8■■□□□ 1.24
TSPAN1-204ENST00000470318 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
TSPAN1-204ENST00000470318 BCANQ96GW7 911 aa22.8■■□□□ 1.24
TSPAN1-204ENST00000470318 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
TSPAN1-204ENST00000470318 KCNA6P17658 529 aa22.78■■□□□ 1.24
TSPAN1-204ENST00000470318 TBX22Q9Y458 520 aa22.78■■□□□ 1.24
TSPAN1-204ENST00000470318 PIK3R4Q99570 1358 aa22.77■■□□□ 1.24
TSPAN1-204ENST00000470318 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
TSPAN1-204ENST00000470318 RPGRIP1LQ68CZ1 1315 aa22.76■■□□□ 1.23
TSPAN1-204ENST00000470318 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
TSPAN1-204ENST00000470318 SETD1AO15047 1707 aaKnown RBP22.74■■□□□ 1.23
TSPAN1-204ENST00000470318 ALKQ9UM73 1620 aa22.73■■□□□ 1.23
TSPAN1-204ENST00000470318 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
TSPAN1-204ENST00000470318 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
TSPAN1-204ENST00000470318 VGFO15240 615 aaPredicted RBP22.7■■□□□ 1.22
TSPAN1-204ENST00000470318 TOM1O60784 492 aa22.7■■□□□ 1.22
TSPAN1-204ENST00000470318 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
TSPAN1-204ENST00000470318 TMEM94Q12767 1356 aa22.68■■□□□ 1.22
TSPAN1-204ENST00000470318 ANKRD30BQ9BXX2 1392 aa22.66■■□□□ 1.22
TSPAN1-204ENST00000470318 NCOA3Q9Y6Q9 1424 aa22.65■■□□□ 1.22
TSPAN1-204ENST00000470318 PROSER2Q86WR7 435 aaPredicted RBP22.65■■□□□ 1.22
TSPAN1-204ENST00000470318 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
TSPAN1-204ENST00000470318 METP08581 1390 aa22.62■■□□□ 1.21
TSPAN1-204ENST00000470318 MYOM2P54296 1465 aa22.6■■□□□ 1.21
TSPAN1-204ENST00000470318 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
TSPAN1-204ENST00000470318 LAMC1P11047 1609 aa22.6■■□□□ 1.21
TSPAN1-204ENST00000470318 PRAG1Q86YV5 1406 aa22.59■■□□□ 1.21
TSPAN1-204ENST00000470318 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
TSPAN1-204ENST00000470318 MSH6P52701 1360 aa22.59■■□□□ 1.21
TSPAN1-204ENST00000470318 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.58■■□□□ 1.21
TSPAN1-204ENST00000470318 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
TSPAN1-204ENST00000470318 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
TSPAN1-204ENST00000470318 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
TSPAN1-204ENST00000470318 ADGRF5Q8IZF2 1346 aa22.56■■□□□ 1.2
TSPAN1-204ENST00000470318 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
TSPAN1-204ENST00000470318 PTCH1Q13635 1447 aa22.55■■□□□ 1.2
TSPAN1-204ENST00000470318 KNDC1Q76NI1 1749 aa22.54■■□□□ 1.2
TSPAN1-204ENST00000470318 RBM33Q96EV2 1170 aaKnown RBP22.54■■□□□ 1.2
TSPAN1-204ENST00000470318 ROBO1Q9Y6N7 1651 aa22.53■■□□□ 1.2
TSPAN1-204ENST00000470318 NALCNQ8IZF0 1738 aa22.53■■□□□ 1.2
TSPAN1-204ENST00000470318 DCCP43146 1447 aa22.52■■□□□ 1.2
TSPAN1-204ENST00000470318 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
TSPAN1-204ENST00000470318 ASXL1Q8IXJ9 1541 aa22.51■■□□□ 1.19
TSPAN1-204ENST00000470318 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
TSPAN1-204ENST00000470318 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
TSPAN1-204ENST00000470318 C19orf44Q9H6X5 657 aa22.48■■□□□ 1.19
TSPAN1-204ENST00000470318 ADGRL3Q9HAR2 1447 aa22.48■■□□□ 1.19
TSPAN1-204ENST00000470318 TECPR2O15040 1411 aa22.47■■□□□ 1.19
TSPAN1-204ENST00000470318 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
TSPAN1-204ENST00000470318 HSPA1LP34931 641 aa22.45■■□□□ 1.18
TSPAN1-204ENST00000470318 CADPS2Q86UW7 1296 aa22.45■■□□□ 1.18
TSPAN1-204ENST00000470318 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
TSPAN1-204ENST00000470318 LRPPRCP42704 1394 aaKnown RBP22.43■■□□□ 1.18
TSPAN1-204ENST00000470318 ATF3P18847 181 aa22.42■■□□□ 1.18
TSPAN1-204ENST00000470318 C14orf93Q9H972 538 aaKnown RBP22.42■■□□□ 1.18
TSPAN1-204ENST00000470318 SLAIN2Q9P270 581 aa22.42■■□□□ 1.18
TSPAN1-204ENST00000470318 DHX57Q6P158 1386 aaKnown RBP22.41■■□□□ 1.18
TSPAN1-204ENST00000470318 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
TSPAN1-204ENST00000470318 ABCC11Q96J66 1382 aa22.4■■□□□ 1.18
TSPAN1-204ENST00000470318 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
TSPAN1-204ENST00000470318 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
TSPAN1-204ENST00000470318 KIAA1210Q9ULL0 1709 aa22.39■■□□□ 1.17
TSPAN1-204ENST00000470318 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
TSPAN1-204ENST00000470318 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
TSPAN1-204ENST00000470318 MST1RQ04912 1400 aa22.38■■□□□ 1.17
TSPAN1-204ENST00000470318 AHDC1Q5TGY3 1603 aaPredicted RBP22.36■■□□□ 1.17
TSPAN1-204ENST00000470318 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
TSPAN1-204ENST00000470318 DLC1Q96QB1 1528 aa22.36■■□□□ 1.17
TSPAN1-204ENST00000470318 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
TSPAN1-204ENST00000470318 COL16A1Q07092 1604 aaPredicted RBP22.34■■□□□ 1.17
TSPAN1-204ENST00000470318 NHSL1Q5SYE7 1610 aa22.34■■□□□ 1.17
TSPAN1-204ENST00000470318 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
TSPAN1-204ENST00000470318 SIRT1Q96EB6 747 aa22.32■■□□□ 1.16
TSPAN1-204ENST00000470318 STK26Q9P289 416 aa22.32■■□□□ 1.16
TSPAN1-204ENST00000470318 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
TSPAN1-204ENST00000470318 FMN2Q9NZ56 1722 aa22.29■■□□□ 1.16
TSPAN1-204ENST00000470318 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms