RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 RIMS2Q9UQ26 1411 aa28.49■■■□□ 2.15
PCGF3-208ENST00000470161 IQGAP1P46940 1657 aa28.48■■■□□ 2.15
PCGF3-208ENST00000470161 ZNF335Q9H4Z2 1342 aaPredicted RBP28.46■■■□□ 2.15
PCGF3-208ENST00000470161 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
PCGF3-208ENST00000470161 CLTCL1P53675 1640 aa28.46■■■□□ 2.15
PCGF3-208ENST00000470161 CCDC144AA2RUR9 1427 aa28.46■■■□□ 2.15
PCGF3-208ENST00000470161 NUTM2DQ5VT03 806 aaPredicted RBP28.44■■■□□ 2.14
PCGF3-208ENST00000470161 ZFYVE9O95405 1425 aa28.43■■■□□ 2.14
PCGF3-208ENST00000470161 CERKQ8TCT0 537 aa28.43■■■□□ 2.14
PCGF3-208ENST00000470161 SENP3Q9H4L4 574 aaPredicted RBP28.43■■■□□ 2.14
PCGF3-208ENST00000470161 KIF1BO60333 1816 aa28.4■■■□□ 2.14
PCGF3-208ENST00000470161 SLC26A8Q96RN1 970 aa28.38■■■□□ 2.13
PCGF3-208ENST00000470161 PLEKHG1Q9ULL1 1385 aa28.37■■■□□ 2.13
PCGF3-208ENST00000470161 LTBP4Q8N2S1 1624 aa28.35■■■□□ 2.13
PCGF3-208ENST00000470161 RGL3Q3MIN7 710 aa28.34■■■□□ 2.13
PCGF3-208ENST00000470161 RPGRIP1LQ68CZ1 1315 aa28.32■■■□□ 2.12
PCGF3-208ENST00000470161 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
PCGF3-208ENST00000470161 CCER1Q8TC90 406 aaPredicted RBP28.29■■■□□ 2.12
PCGF3-208ENST00000470161 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
PCGF3-208ENST00000470161 TBX22Q9Y458 520 aa28.28■■■□□ 2.12
PCGF3-208ENST00000470161 CPS1P31327 1500 aa28.28■■■□□ 2.12
PCGF3-208ENST00000470161 NEXMIFQ5QGS0 1516 aa28.26■■■□□ 2.11
PCGF3-208ENST00000470161 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
PCGF3-208ENST00000470161 FBXO41Q8TF61 875 aa28.24■■■□□ 2.11
PCGF3-208ENST00000470161 KCNA6P17658 529 aa28.23■■■□□ 2.11
PCGF3-208ENST00000470161 SPATA31E1Q6ZUB1 1445 aa28.23■■■□□ 2.11
PCGF3-208ENST00000470161 IQSEC2Q5JU85 1478 aa28.2■■■□□ 2.11
PCGF3-208ENST00000470161 ADAMTS13Q76LX8 1427 aa28.2■■■□□ 2.1
PCGF3-208ENST00000470161 DIP2AQ14689 1571 aa28.19■■■□□ 2.1
PCGF3-208ENST00000470161 ILDR1Q86SU0 546 aaPredicted RBP28.16■■■□□ 2.1
PCGF3-208ENST00000470161 PROSER2Q86WR7 435 aaPredicted RBP28.16■■■□□ 2.1
PCGF3-208ENST00000470161 SETBP1Q9Y6X0 1596 aa28.16■■■□□ 2.1
PCGF3-208ENST00000470161 PIK3R4Q99570 1358 aa28.16■■■□□ 2.1
PCGF3-208ENST00000470161 STRCP1A6NGW2 1772 aa28.14■■■□□ 2.1
PCGF3-208ENST00000470161 PPLO60437 1756 aa28.14■■■□□ 2.09
PCGF3-208ENST00000470161 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
PCGF3-208ENST00000470161 UBAP1LF5GYI3 381 aa28.13■■■□□ 2.09
PCGF3-208ENST00000470161 ADGRF5Q8IZF2 1346 aa28.11■■■□□ 2.09
PCGF3-208ENST00000470161 AMOTL2Q9Y2J4 779 aa28.1■■■□□ 2.09
PCGF3-208ENST00000470161 DHX57Q6P158 1386 aaKnown RBP28.09■■■□□ 2.09
PCGF3-208ENST00000470161 NKTRP30414 1462 aaKnown RBP28.09■■■□□ 2.09
PCGF3-208ENST00000470161 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
PCGF3-208ENST00000470161 CHD2O14647 1828 aaKnown RBP28.07■■■□□ 2.08
PCGF3-208ENST00000470161 TOM1O60784 492 aa28.07■■■□□ 2.08
PCGF3-208ENST00000470161 TMEM94Q12767 1356 aa28.07■■■□□ 2.08
PCGF3-208ENST00000470161 NWD1Q149M9 1564 aa28.07■■■□□ 2.08
PCGF3-208ENST00000470161 DCAF11Q8TEB1 546 aa28.07■■■□□ 2.08
PCGF3-208ENST00000470161 METP08581 1390 aa28.06■■■□□ 2.08
PCGF3-208ENST00000470161 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
PCGF3-208ENST00000470161 KDM2AQ9Y2K7 1162 aa28.06■■■□□ 2.08
PCGF3-208ENST00000470161 IFT172Q9UG01 1749 aa28.04■■■□□ 2.08
PCGF3-208ENST00000470161 C14orf37Q86TY3 774 aa28.03■■■□□ 2.08
PCGF3-208ENST00000470161 ALKQ9UM73 1620 aa28.03■■■□□ 2.08
PCGF3-208ENST00000470161 STAC3Q96MF2 364 aa28.03■■■□□ 2.08
PCGF3-208ENST00000470161 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
PCGF3-208ENST00000470161 SCAF1Q9H7N4 1312 aaKnown RBP28.01■■■□□ 2.07
PCGF3-208ENST00000470161 MYOM2P54296 1465 aa28■■■□□ 2.07
PCGF3-208ENST00000470161 NEUROD1Q13562 356 aa28■■■□□ 2.07
PCGF3-208ENST00000470161 PIK3C2GO75747 1445 aa27.99■■■□□ 2.07
PCGF3-208ENST00000470161 SIN3AQ96ST3 1273 aa27.98■■■□□ 2.07
PCGF3-208ENST00000470161 PIP4K2BP78356 416 aa27.97■■■□□ 2.07
PCGF3-208ENST00000470161 MSH6P52701 1360 aa27.97■■■□□ 2.07
PCGF3-208ENST00000470161 C14orf93Q9H972 538 aaKnown RBP27.95■■■□□ 2.07
PCGF3-208ENST00000470161 NCOA3Q9Y6Q9 1424 aa27.94■■■□□ 2.06
PCGF3-208ENST00000470161 CFAP70Q5T0N1 1121 aa27.94■■■□□ 2.06
PCGF3-208ENST00000470161 TMEM132EQ6IEE7 984 aa27.94■■■□□ 2.06
PCGF3-208ENST00000470161 NRXN1Q9ULB1 1477 aa27.92■■■□□ 2.06
PCGF3-208ENST00000470161 STK26Q9P289 416 aa27.92■■■□□ 2.06
PCGF3-208ENST00000470161 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
PCGF3-208ENST00000470161 XIRP1Q702N8 1843 aaKnown RBP27.91■■■□□ 2.06
PCGF3-208ENST00000470161 SETD1AO15047 1707 aaKnown RBP27.91■■■□□ 2.06
PCGF3-208ENST00000470161 C19orf44Q9H6X5 657 aa27.9■■■□□ 2.06
PCGF3-208ENST00000470161 ATF3P18847 181 aa27.87■■■□□ 2.05
PCGF3-208ENST00000470161 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
PCGF3-208ENST00000470161 LAMC1P11047 1609 aa27.86■■■□□ 2.05
PCGF3-208ENST00000470161 CADPS2Q86UW7 1296 aa27.85■■■□□ 2.05
PCGF3-208ENST00000470161 L3MBTL2Q969R5 705 aa27.85■■■□□ 2.05
PCGF3-208ENST00000470161 LRPPRCP42704 1394 aaKnown RBP27.85■■■□□ 2.05
PCGF3-208ENST00000470161 ROBO2Q9HCK4 1378 aa27.85■■■□□ 2.05
PCGF3-208ENST00000470161 YTHDC2Q9H6S0 1430 aaKnown RBP27.83■■■□□ 2.05
PCGF3-208ENST00000470161 ABCC11Q96J66 1382 aa27.82■■■□□ 2.04
PCGF3-208ENST00000470161 SLAIN2Q9P270 581 aa27.81■■■□□ 2.04
PCGF3-208ENST00000470161 PRAG1Q86YV5 1406 aa27.79■■■□□ 2.04
PCGF3-208ENST00000470161 ASXL1Q8IXJ9 1541 aa27.79■■■□□ 2.04
PCGF3-208ENST00000470161 TONSLQ96HA7 1378 aa27.77■■■□□ 2.04
PCGF3-208ENST00000470161 WAPLQ7Z5K2 1190 aa27.77■■■□□ 2.04
PCGF3-208ENST00000470161 TECPR2O15040 1411 aa27.77■■■□□ 2.04
PCGF3-208ENST00000470161 ADGRL3Q9HAR2 1447 aa27.77■■■□□ 2.04
PCGF3-208ENST00000470161 CLSPNQ9HAW4 1339 aa27.76■■■□□ 2.03
PCGF3-208ENST00000470161 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.76■■■□□ 2.03
PCGF3-208ENST00000470161 DCCP43146 1447 aa27.75■■■□□ 2.03
PCGF3-208ENST00000470161 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
PCGF3-208ENST00000470161 POGKQ9P215 609 aa27.74■■■□□ 2.03
PCGF3-208ENST00000470161 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
PCGF3-208ENST00000470161 FAM135BQ49AJ0 1406 aa27.73■■■□□ 2.03
PCGF3-208ENST00000470161 HSPA1LP34931 641 aa27.72■■■□□ 2.03
PCGF3-208ENST00000470161 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
PCGF3-208ENST00000470161 ADGRB1O14514 1584 aa27.7■■■□□ 2.03
PCGF3-208ENST00000470161 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.03
PCGF3-208ENST00000470161 SAFB2Q14151 953 aaKnown RBP eCLIP27.68■■■□□ 2.024e-6■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms