RNA–Protein interactions for RNA: ENST00000470143.1

NOP56-210, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-210ENST00000470143 NWD1Q149M9 1564 aa20.61■□□□□ 0.89
NOP56-210ENST00000470143 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
NOP56-210ENST00000470143 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
NOP56-210ENST00000470143 PLEKHG1Q9ULL1 1385 aa20.59■□□□□ 0.89
NOP56-210ENST00000470143 CHD2O14647 1828 aaKnown RBP20.57■□□□□ 0.88
NOP56-210ENST00000470143 FAM135BQ49AJ0 1406 aa20.57■□□□□ 0.88
NOP56-210ENST00000470143 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
NOP56-210ENST00000470143 TMEM94Q12767 1356 aa20.57■□□□□ 0.88
NOP56-210ENST00000470143 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
NOP56-210ENST00000470143 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
NOP56-210ENST00000470143 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
NOP56-210ENST00000470143 NUP155O75694 1391 aa20.52■□□□□ 0.88
NOP56-210ENST00000470143 TBX22Q9Y458 520 aa20.52■□□□□ 0.88
NOP56-210ENST00000470143 NCOA3Q9Y6Q9 1424 aa20.5■□□□□ 0.87
NOP56-210ENST00000470143 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
NOP56-210ENST00000470143 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
NOP56-210ENST00000470143 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
NOP56-210ENST00000470143 BCANQ96GW7 911 aa20.48■□□□□ 0.87
NOP56-210ENST00000470143 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
NOP56-210ENST00000470143 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
NOP56-210ENST00000470143 ROBO1Q9Y6N7 1651 aa20.46■□□□□ 0.87
NOP56-210ENST00000470143 SPHKAPQ2M3C7 1700 aa20.46■□□□□ 0.87
NOP56-210ENST00000470143 MSH6P52701 1360 aa20.46■□□□□ 0.87
NOP56-210ENST00000470143 ITGAEP38570 1179 aa20.45■□□□□ 0.86
NOP56-210ENST00000470143 CHGAP10645 457 aaKnown RBP20.43■□□□□ 0.86
NOP56-210ENST00000470143 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
NOP56-210ENST00000470143 RBM33Q96EV2 1170 aaKnown RBP20.41■□□□□ 0.86
NOP56-210ENST00000470143 SLAIN2Q9P270 581 aa20.41■□□□□ 0.86
NOP56-210ENST00000470143 TRPM2O94759 1503 aa20.4■□□□□ 0.86
NOP56-210ENST00000470143 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
NOP56-210ENST00000470143 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
NOP56-210ENST00000470143 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
NOP56-210ENST00000470143 NAIPQ13075 1403 aa20.37■□□□□ 0.85
NOP56-210ENST00000470143 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
NOP56-210ENST00000470143 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.36■□□□□ 0.85
NOP56-210ENST00000470143 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
NOP56-210ENST00000470143 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
NOP56-210ENST00000470143 PHLPP1O60346 1717 aa20.35■□□□□ 0.85
NOP56-210ENST00000470143 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
NOP56-210ENST00000470143 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.85
NOP56-210ENST00000470143 KIF1BO60333 1816 aa20.33■□□□□ 0.85
NOP56-210ENST00000470143 CADPS2Q86UW7 1296 aa20.33■□□□□ 0.85
NOP56-210ENST00000470143 PTPRUQ92729 1446 aa20.33■□□□□ 0.84
NOP56-210ENST00000470143 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
NOP56-210ENST00000470143 AMOTL2Q9Y2J4 779 aa20.32■□□□□ 0.84
NOP56-210ENST00000470143 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
NOP56-210ENST00000470143 DCCP43146 1447 aa20.3■□□□□ 0.84
NOP56-210ENST00000470143 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
NOP56-210ENST00000470143 COL16A1Q07092 1604 aaPredicted RBP20.3■□□□□ 0.84
NOP56-210ENST00000470143 JCADQ9P266 1359 aa20.3■□□□□ 0.84
NOP56-210ENST00000470143 AHDC1Q5TGY3 1603 aaPredicted RBP20.28■□□□□ 0.84
NOP56-210ENST00000470143 ATF3P18847 181 aa20.28■□□□□ 0.84
NOP56-210ENST00000470143 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
NOP56-210ENST00000470143 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
NOP56-210ENST00000470143 METP08581 1390 aa20.24■□□□□ 0.83
NOP56-210ENST00000470143 SHPRHQ149N8 1683 aa20.22■□□□□ 0.83
NOP56-210ENST00000470143 SPATA31A6Q5VVP1 1343 aa20.22■□□□□ 0.83
NOP56-210ENST00000470143 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
NOP56-210ENST00000470143 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
NOP56-210ENST00000470143 SETD1AO15047 1707 aaKnown RBP20.2■□□□□ 0.82
NOP56-210ENST00000470143 POTEAQ6S8J7 498 aa20.2■□□□□ 0.82
NOP56-210ENST00000470143 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
NOP56-210ENST00000470143 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
NOP56-210ENST00000470143 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
NOP56-210ENST00000470143 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
NOP56-210ENST00000470143 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
NOP56-210ENST00000470143 PPLO60437 1756 aa20.18■□□□□ 0.82
NOP56-210ENST00000470143 MST1RQ04912 1400 aa20.18■□□□□ 0.82
NOP56-210ENST00000470143 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
NOP56-210ENST00000470143 PTCH1Q13635 1447 aa20.16■□□□□ 0.82
NOP56-210ENST00000470143 ASXL1Q8IXJ9 1541 aa20.16■□□□□ 0.82
NOP56-210ENST00000470143 NALCNQ8IZF0 1738 aa20.16■□□□□ 0.82
NOP56-210ENST00000470143 SETD5Q9C0A6 1442 aa20.14■□□□□ 0.81
NOP56-210ENST00000470143 LRP6O75581 1613 aa20.13■□□□□ 0.81
NOP56-210ENST00000470143 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
NOP56-210ENST00000470143 LAMC1P11047 1609 aa20.11■□□□□ 0.81
NOP56-210ENST00000470143 ZNF772Q68DY9 489 aaPredicted RBP20.08■□□□□ 0.81
NOP56-210ENST00000470143 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
NOP56-210ENST00000470143 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.8
NOP56-210ENST00000470143 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
NOP56-210ENST00000470143 C1orf167Q5SNV9 1468 aa20.06■□□□□ 0.8
NOP56-210ENST00000470143 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
NOP56-210ENST00000470143 SPATA31E1Q6ZUB1 1445 aa20.06■□□□□ 0.8
NOP56-210ENST00000470143 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
NOP56-210ENST00000470143 MPHOSPH9Q99550 1183 aa20.05■□□□□ 0.8
NOP56-210ENST00000470143 ANKRD30BQ9BXX2 1392 aa20.04■□□□□ 0.8
NOP56-210ENST00000470143 FOXD1Q16676 465 aa20.02■□□□□ 0.8
NOP56-210ENST00000470143 TECPR2O15040 1411 aa20.02■□□□□ 0.79
NOP56-210ENST00000470143 PNPLA6Q8IY17 1366 aa20.01■□□□□ 0.79
NOP56-210ENST00000470143 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
NOP56-210ENST00000470143 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
NOP56-210ENST00000470143 ADGRF5Q8IZF2 1346 aa19.99■□□□□ 0.79
NOP56-210ENST00000470143 KNDC1Q76NI1 1749 aa19.99■□□□□ 0.79
NOP56-210ENST00000470143 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
NOP56-210ENST00000470143 LRPPRCP42704 1394 aaKnown RBP19.96■□□□□ 0.79
NOP56-210ENST00000470143 ABCC11Q96J66 1382 aa19.96■□□□□ 0.79
NOP56-210ENST00000470143 PIK3C2GO75747 1445 aa19.96■□□□□ 0.79
NOP56-210ENST00000470143 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
NOP56-210ENST00000470143 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
NOP56-210ENST00000470143 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms