RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CD109Q6YHK3 1445 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 PSDA5PKW4 1024 aaPredicted RBP7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 RGL3Q3MIN7 710 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 NAP1L2Q9ULW6 460 aaPredicted RBP7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 KDM2AQ9Y2K7 1162 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 CADPS2Q86UW7 1296 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 RUFY2Q8WXA3 655 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 FGD1P98174 961 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 GOLGA2Q08379 1002 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 DNTTIP2Q5QJE6 756 aaKnown RBP7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 CASKIN1Q8WXD9 1431 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 CAVIN1Q6NZI2 390 aaKnown RBP7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 HOMEZQ8IX15 550 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 CWC22Q9HCG8 908 aaKnown RBP7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 HOOK1Q9UJC3 728 aaKnown RBP7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 ZBED9Q6R2W3 1325 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 PRDM11Q9NQV5 511 aa7.59□□□□□ -1.19
CCDC144A-212ENST00000470068 RCAN3Q9UKA8 241 aa7.59□□□□□ -1.2
CCDC144A-212ENST00000470068 RRBP1Q9P2E9 1410 aaKnown RBP7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 GOLGA6L3A6NEY3 463 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 KCNJ4P48050 445 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 MPHOSPH9Q99550 1183 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 KIF7Q2M1P5 1343 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 LETM1O95202 739 aaPredicted RBP7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 OS9Q13438 667 aaPredicted RBP7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 USP21Q9UK80 565 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 RAB3GAP2Q9H2M9 1393 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 MCM2P49736 904 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 RSPH6AQ9H0K4 717 aa7.58□□□□□ -1.2
CCDC144A-212ENST00000470068 CPLX2Q6PUV4 134 aaKnown RBP7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 API5Q9BZZ5 524 aaKnown RBP7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 FANCIQ9NVI1 1328 aa7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 NUP155O75694 1391 aa7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 GPBP1L1Q9HC44 474 aaPredicted RBP7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 HMGB1P09429 215 aaKnown RBP7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 CCDC47Q96A33 483 aaKnown RBP7.57□□□□□ -1.2
CCDC144A-212ENST00000470068 RPGRIP1LQ68CZ1 1315 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 TPM2P07951 284 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 EHBP1L1Q8N3D4 1523 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 EVC2Q86UK5 1308 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 ANKRD30BQ9BXX2 1392 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 CCP110O43303 1012 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 LRRC59Q96AG4 307 aaKnown RBP7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 CDR1P51861 262 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 ZNF219Q9P2Y4 722 aaPredicted RBP7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 BRD4O60885 1362 aaPredicted RBP7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 REC8O95072 547 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 TPM1P09493 284 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 TXLNBQ8N3L3 684 aa7.56□□□□□ -1.2
CCDC144A-212ENST00000470068 CENPJQ9HC77 1338 aaPredicted RBP7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 KRI1Q8N9T8 703 aaKnown RBP7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 APBA3O96018 575 aa7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 TRPC5Q9UL62 973 aaPredicted RBP7.55□□□□□ -1.2
CCDC144A-212ENST00000470068 IPO9Q96P70 1041 aaKnown RBP7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 HSPA5P11021 654 aaKnown RBP7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 HIP1O00291 1037 aa7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 NUCB2P80303 420 aa7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 DCAF11Q8TEB1 546 aa7.54□□□□□ -1.2
CCDC144A-212ENST00000470068 DDX19BQ9UMR2 479 aa7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 PIP4K2AP48426 406 aaPredicted RBP7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 DHX29Q7Z478 1369 aaKnown RBP7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 ANKRD20A12PQ8NF67 263 aa7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 SUPT16HQ9Y5B9 1047 aaKnown RBP7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
CCDC144A-212ENST00000470068 RNF20Q5VTR2 975 aa7.52□□□□□ -1.21
CCDC144A-212ENST00000470068 SNAPC4Q5SXM2 1469 aa7.52□□□□□ -1.21
CCDC144A-212ENST00000470068 SYNJ1O43426 1573 aa7.52□□□□□ -1.21
CCDC144A-212ENST00000470068 TSR1Q2NL82 804 aaKnown RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 GNL2Q13823 731 aaKnown RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 AFAP1Q8N556 730 aa7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 LTV1Q96GA3 475 aaPredicted RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 ARHGEF11O15085 1522 aa7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 RBM6P78332 1123 aaKnown RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 DHX37Q8IY37 1157 aaKnown RBP7.51□□□□□ -1.21
CCDC144A-212ENST00000470068 HECW1Q76N89 1606 aa7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 RDXP35241 583 aaKnown RBP7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 AMOTL1Q8IY63 956 aa7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 TNS4Q8IZW8 715 aa7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 FGD6Q6ZV73 1430 aa7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 XPCQ01831 940 aaPredicted RBP7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 TOM1L2Q6ZVM7 507 aa7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 PNISRQ8TF01 805 aaKnown RBP7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
CCDC144A-212ENST00000470068 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 KDM4FA0A1W2PPD8 638 aa7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 CCAR1Q8IX12 1150 aaKnown RBP7.49□□□□□ -1.21
CCDC144A-212ENST00000470068 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms