RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 SLC26A8Q96RN1 970 aa31.94■■■□□ 2.7
RTN4R-205ENST00000469601 LRRC7Q96NW7 1537 aa31.94■■■□□ 2.7
RTN4R-205ENST00000469601 PLEKHG1Q9ULL1 1385 aa31.94■■■□□ 2.7
RTN4R-205ENST00000469601 KCNA6P17658 529 aa31.9■■■□□ 2.7
RTN4R-205ENST00000469601 STRCP1A6NGW2 1772 aa31.87■■■□□ 2.69
RTN4R-205ENST00000469601 SCAF1Q9H7N4 1312 aaKnown RBP31.86■■■□□ 2.69
RTN4R-205ENST00000469601 SLC4A1APQ9BWU0 796 aaKnown RBP31.86■■■□□ 2.69
RTN4R-205ENST00000469601 SPHKAPQ2M3C7 1700 aa31.86■■■□□ 2.69
RTN4R-205ENST00000469601 PIP4K2BP78356 416 aa31.84■■■□□ 2.69
RTN4R-205ENST00000469601 ACIN1Q9UKV3 1341 aaKnown RBP31.83■■■□□ 2.69
RTN4R-205ENST00000469601 TBX22Q9Y458 520 aa31.83■■■□□ 2.69
RTN4R-205ENST00000469601 MYO5BQ9ULV0 1848 aa31.82■■■□□ 2.68
RTN4R-205ENST00000469601 TRPM2O94759 1503 aa31.81■■■□□ 2.68
RTN4R-205ENST00000469601 ZNF326Q5BKZ1 582 aaKnown RBP31.8■■■□□ 2.68
RTN4R-205ENST00000469601 NUTM2DQ5VT03 806 aaPredicted RBP31.79■■■□□ 2.68
RTN4R-205ENST00000469601 PROSER2Q86WR7 435 aaPredicted RBP31.79■■■□□ 2.68
RTN4R-205ENST00000469601 NKTRP30414 1462 aaKnown RBP31.78■■■□□ 2.68
RTN4R-205ENST00000469601 SENP3Q9H4L4 574 aaPredicted RBP31.78■■■□□ 2.68
RTN4R-205ENST00000469601 TMEM94Q12767 1356 aa31.76■■■□□ 2.67
RTN4R-205ENST00000469601 NWD1Q149M9 1564 aa31.74■■■□□ 2.67
RTN4R-205ENST00000469601 DIP2AQ14689 1571 aa31.73■■■□□ 2.67
RTN4R-205ENST00000469601 PIK3R4Q99570 1358 aa31.73■■■□□ 2.67
RTN4R-205ENST00000469601 ADAMTS13Q76LX8 1427 aa31.72■■■□□ 2.67
RTN4R-205ENST00000469601 CLTCL1P53675 1640 aa31.71■■■□□ 2.67
RTN4R-205ENST00000469601 ALKQ9UM73 1620 aa31.7■■■□□ 2.66
RTN4R-205ENST00000469601 HSPA1LP34931 641 aa31.69■■■□□ 2.66
RTN4R-205ENST00000469601 SETD5Q9C0A6 1442 aa31.68■■■□□ 2.66
RTN4R-205ENST00000469601 MPHOSPH9Q99550 1183 aa31.67■■■□□ 2.66
RTN4R-205ENST00000469601 RPGRIP1LQ68CZ1 1315 aa31.63■■■□□ 2.65
RTN4R-205ENST00000469601 MSH6P52701 1360 aa31.63■■■□□ 2.65
RTN4R-205ENST00000469601 VGFO15240 615 aaPredicted RBP31.62■■■□□ 2.65
RTN4R-205ENST00000469601 NCOA3Q9Y6Q9 1424 aa31.62■■■□□ 2.65
RTN4R-205ENST00000469601 CHD2O14647 1828 aaKnown RBP31.61■■■□□ 2.65
RTN4R-205ENST00000469601 SETBP1Q9Y6X0 1596 aa31.61■■■□□ 2.65
RTN4R-205ENST00000469601 RBM33Q96EV2 1170 aaKnown RBP31.61■■■□□ 2.65
RTN4R-205ENST00000469601 XIRP1Q702N8 1843 aaKnown RBP31.61■■■□□ 2.65
RTN4R-205ENST00000469601 NEXMIFQ5QGS0 1516 aa31.6■■■□□ 2.65
RTN4R-205ENST00000469601 DISP3Q9P2K9 1392 aa31.6■■■□□ 2.65
RTN4R-205ENST00000469601 FOXD1Q16676 465 aa31.6■■■□□ 2.65
RTN4R-205ENST00000469601 KIF1BO60333 1816 aa31.6■■■□□ 2.65
RTN4R-205ENST00000469601 CCDC144AA2RUR9 1427 aa31.58■■■□□ 2.65
RTN4R-205ENST00000469601 AMOTL2Q9Y2J4 779 aa31.58■■■□□ 2.65
RTN4R-205ENST00000469601 FAM135BQ49AJ0 1406 aa31.56■■■□□ 2.64
RTN4R-205ENST00000469601 C14orf37Q86TY3 774 aa31.55■■■□□ 2.64
RTN4R-205ENST00000469601 RAB3GAP2Q9H2M9 1393 aa31.54■■■□□ 2.64
RTN4R-205ENST00000469601 NRXN3Q9Y4C0 1643 aa31.52■■■□□ 2.64
RTN4R-205ENST00000469601 PTPRUQ92729 1446 aa31.5■■■□□ 2.63
RTN4R-205ENST00000469601 METP08581 1390 aa31.49■■■□□ 2.63
RTN4R-205ENST00000469601 C19orf44Q9H6X5 657 aa31.49■■■□□ 2.63
RTN4R-205ENST00000469601 SLAIN2Q9P270 581 aa31.49■■■□□ 2.63
RTN4R-205ENST00000469601 CADPS2Q86UW7 1296 aa31.46■■■□□ 2.63
RTN4R-205ENST00000469601 HRCP23327 699 aa31.45■■■□□ 2.63
RTN4R-205ENST00000469601 ATF3P18847 181 aa31.44■■■□□ 2.62
RTN4R-205ENST00000469601 SPATA31E1Q6ZUB1 1445 aa31.42■■■□□ 2.62
RTN4R-205ENST00000469601 RGL3Q3MIN7 710 aa31.42■■■□□ 2.62
RTN4R-205ENST00000469601 ANKRD30BQ9BXX2 1392 aa31.42■■■□□ 2.62
RTN4R-205ENST00000469601 XRN1Q8IZH2 1706 aaKnown RBP31.41■■■□□ 2.62
RTN4R-205ENST00000469601 DCCP43146 1447 aa31.37■■■□□ 2.61
RTN4R-205ENST00000469601 ROBO1Q9Y6N7 1651 aa31.37■■■□□ 2.61
RTN4R-205ENST00000469601 PPLO60437 1756 aa31.35■■■□□ 2.61
RTN4R-205ENST00000469601 MED1Q15648 1581 aaPredicted RBP31.33■■■□□ 2.61
RTN4R-205ENST00000469601 ADGRF5Q8IZF2 1346 aa31.32■■■□□ 2.6
RTN4R-205ENST00000469601 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
RTN4R-205ENST00000469601 PTCH1Q13635 1447 aa31.31■■■□□ 2.6
RTN4R-205ENST00000469601 PRAG1Q86YV5 1406 aa31.29■■■□□ 2.6
RTN4R-205ENST00000469601 ADGRL3Q9HAR2 1447 aa31.28■■■□□ 2.6
RTN4R-205ENST00000469601 SETD1AO15047 1707 aaKnown RBP31.26■■■□□ 2.59
RTN4R-205ENST00000469601 ILDR2Q71H61 639 aa31.25■■■□□ 2.59
RTN4R-205ENST00000469601 PHF23Q9BUL5 403 aaPredicted RBP31.24■■■□□ 2.59
RTN4R-205ENST00000469601 ROBO2Q9HCK4 1378 aa31.23■■■□□ 2.59
RTN4R-205ENST00000469601 PIK3C2GO75747 1445 aa31.23■■■□□ 2.59
RTN4R-205ENST00000469601 IFT172Q9UG01 1749 aa31.21■■■□□ 2.59
RTN4R-205ENST00000469601 MST1RQ04912 1400 aa31.19■■■□□ 2.58
RTN4R-205ENST00000469601 BRINP3Q76B58 766 aa31.19■■■□□ 2.58
RTN4R-205ENST00000469601 MYOM2P54296 1465 aa31.18■■■□□ 2.58
RTN4R-205ENST00000469601 JCADQ9P266 1359 aa31.17■■■□□ 2.58
RTN4R-205ENST00000469601 PHLPP1O60346 1717 aa31.17■■■□□ 2.58
RTN4R-205ENST00000469601 LRPPRCP42704 1394 aaKnown RBP31.16■■■□□ 2.58
RTN4R-205ENST00000469601 C14orf93Q9H972 538 aaKnown RBP31.15■■■□□ 2.58
RTN4R-205ENST00000469601 AHDC1Q5TGY3 1603 aaPredicted RBP31.14■■■□□ 2.58
RTN4R-205ENST00000469601 STK26Q9P289 416 aa31.14■■■□□ 2.58
RTN4R-205ENST00000469601 ABCC11Q96J66 1382 aa31.14■■■□□ 2.58
RTN4R-205ENST00000469601 NRXN1Q9ULB1 1477 aa31.14■■■□□ 2.57
RTN4R-205ENST00000469601 STAC3Q96MF2 364 aa31.13■■■□□ 2.57
RTN4R-205ENST00000469601 TECPR2O15040 1411 aa31.13■■■□□ 2.57
RTN4R-205ENST00000469601 TMEM132EQ6IEE7 984 aa31.12■■■□□ 2.57
RTN4R-205ENST00000469601 NALCNQ8IZF0 1738 aa31.12■■■□□ 2.57
RTN4R-205ENST00000469601 ASXL1Q8IXJ9 1541 aa31.1■■■□□ 2.57
RTN4R-205ENST00000469601 COL16A1Q07092 1604 aaPredicted RBP31.09■■■□□ 2.57
RTN4R-205ENST00000469601 YTHDC2Q9H6S0 1430 aaKnown RBP31.07■■■□□ 2.57
RTN4R-205ENST00000469601 DHX57Q6P158 1386 aaKnown RBP31.07■■■□□ 2.56
RTN4R-205ENST00000469601 SOCS7O14512 581 aa31.07■■■□□ 2.56
RTN4R-205ENST00000469601 SIRT1Q96EB6 747 aa31.07■■■□□ 2.56
RTN4R-205ENST00000469601 C1orf167Q5SNV9 1468 aa31.07■■■□□ 2.56
RTN4R-205ENST00000469601 CFAP70Q5T0N1 1121 aa31.06■■■□□ 2.56
RTN4R-205ENST00000469601 SPATA31A6Q5VVP1 1343 aa31.05■■■□□ 2.56
RTN4R-205ENST00000469601 DCAF11Q8TEB1 546 aa31.05■■■□□ 2.56
RTN4R-205ENST00000469601 LAMC1P11047 1609 aa31.05■■■□□ 2.56
RTN4R-205ENST00000469601 WAPLQ7Z5K2 1190 aa31.03■■■□□ 2.56
RTN4R-205ENST00000469601 KDM2AQ9Y2K7 1162 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms