RNA–Protein interactions for RNA: ENST00000469506.3

TRAK1-207, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2

Gene TRAK1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-207ENST00000469506 ZFYVE9O95405 1425 aa29.12■■■□□ 2.25
TRAK1-207ENST00000469506 E9PCH4 1651 aa29.12■■■□□ 2.25
TRAK1-207ENST00000469506 NWD1Q149M9 1564 aa29.1■■■□□ 2.25
TRAK1-207ENST00000469506 CHD2O14647 1828 aaKnown RBP29.08■■■□□ 2.25
TRAK1-207ENST00000469506 PROSER2Q86WR7 435 aaPredicted RBP29.07■■■□□ 2.24
TRAK1-207ENST00000469506 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
TRAK1-207ENST00000469506 RIMS2Q9UQ26 1411 aa29.05■■■□□ 2.24
TRAK1-207ENST00000469506 ROCK1Q13464 1354 aa29.05■■■□□ 2.24
TRAK1-207ENST00000469506 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
TRAK1-207ENST00000469506 IQGAP3Q86VI3 1631 aa29.04■■■□□ 2.24
TRAK1-207ENST00000469506 ROBO1Q9Y6N7 1651 aa29.03■■■□□ 2.24
TRAK1-207ENST00000469506 PLEKHG1Q9ULL1 1385 aa29.02■■■□□ 2.24
TRAK1-207ENST00000469506 NKTRP30414 1462 aaKnown RBP29.02■■■□□ 2.24
TRAK1-207ENST00000469506 BCANQ96GW7 911 aa29.01■■■□□ 2.23
TRAK1-207ENST00000469506 PHF23Q9BUL5 403 aaPredicted RBP29.01■■■□□ 2.23
TRAK1-207ENST00000469506 RGS17Q9UGC6 210 aaPredicted RBP28.99■■■□□ 2.23
TRAK1-207ENST00000469506 ITGAEP38570 1179 aa28.98■■■□□ 2.23
TRAK1-207ENST00000469506 NUTM2DQ5VT03 806 aaPredicted RBP28.98■■■□□ 2.23
TRAK1-207ENST00000469506 CHGAP10645 457 aaKnown RBP28.96■■■□□ 2.23
TRAK1-207ENST00000469506 ADAMTS13Q76LX8 1427 aa28.94■■■□□ 2.22
TRAK1-207ENST00000469506 NUP155O75694 1391 aa28.93■■■□□ 2.22
TRAK1-207ENST00000469506 PPP1R15AO75807 674 aaPredicted RBP28.93■■■□□ 2.22
TRAK1-207ENST00000469506 TBX22Q9Y458 520 aa28.92■■■□□ 2.22
TRAK1-207ENST00000469506 MSH6P52701 1360 aa28.88■■■□□ 2.21
TRAK1-207ENST00000469506 HDGFP51858 240 aaKnown RBP28.88■■■□□ 2.21
TRAK1-207ENST00000469506 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.87■■■□□ 2.21
TRAK1-207ENST00000469506 SLAIN2Q9P270 581 aa28.87■■■□□ 2.21
TRAK1-207ENST00000469506 PHLPP1O60346 1717 aa28.86■■■□□ 2.21
TRAK1-207ENST00000469506 SPHKAPQ2M3C7 1700 aa28.85■■■□□ 2.21
TRAK1-207ENST00000469506 DIP2AQ14689 1571 aa28.83■■■□□ 2.21
TRAK1-207ENST00000469506 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.83■■■□□ 2.21
TRAK1-207ENST00000469506 PTPRUQ92729 1446 aa28.82■■■□□ 2.2
TRAK1-207ENST00000469506 NRXN3Q9Y4C0 1643 aa28.81■■■□□ 2.2
TRAK1-207ENST00000469506 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
TRAK1-207ENST00000469506 NCOA3Q9Y6Q9 1424 aa28.77■■■□□ 2.2
TRAK1-207ENST00000469506 COL16A1Q07092 1604 aaPredicted RBP28.77■■■□□ 2.2
TRAK1-207ENST00000469506 PIK3R4Q99570 1358 aa28.76■■■□□ 2.2
TRAK1-207ENST00000469506 TRPM2O94759 1503 aa28.75■■■□□ 2.19
TRAK1-207ENST00000469506 AMOTL2Q9Y2J4 779 aa28.74■■■□□ 2.19
TRAK1-207ENST00000469506 CLTCL1P53675 1640 aa28.73■■■□□ 2.19
TRAK1-207ENST00000469506 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
TRAK1-207ENST00000469506 XRN1Q8IZH2 1706 aaKnown RBP28.72■■■□□ 2.19
TRAK1-207ENST00000469506 SETBP1Q9Y6X0 1596 aa28.71■■■□□ 2.19
TRAK1-207ENST00000469506 C14orf37Q86TY3 774 aa28.71■■■□□ 2.19
TRAK1-207ENST00000469506 C19orf44Q9H6X5 657 aa28.7■■■□□ 2.18
TRAK1-207ENST00000469506 NAIPQ13075 1403 aa28.69■■■□□ 2.18
TRAK1-207ENST00000469506 JCADQ9P266 1359 aa28.69■■■□□ 2.18
TRAK1-207ENST00000469506 METP08581 1390 aa28.67■■■□□ 2.18
TRAK1-207ENST00000469506 NEXMIFQ5QGS0 1516 aa28.66■■■□□ 2.18
TRAK1-207ENST00000469506 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
TRAK1-207ENST00000469506 ZNF326Q5BKZ1 582 aaKnown RBP28.65■■■□□ 2.18
TRAK1-207ENST00000469506 CADPS2Q86UW7 1296 aa28.65■■■□□ 2.18
TRAK1-207ENST00000469506 KIF1BO60333 1816 aa28.64■■■□□ 2.18
TRAK1-207ENST00000469506 ATF3P18847 181 aa28.64■■■□□ 2.18
TRAK1-207ENST00000469506 LRP6O75581 1613 aa28.64■■■□□ 2.18
TRAK1-207ENST00000469506 BRINP3Q76B58 766 aa28.6■■■□□ 2.17
TRAK1-207ENST00000469506 SHPRHQ149N8 1683 aa28.59■■■□□ 2.17
TRAK1-207ENST00000469506 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
TRAK1-207ENST00000469506 NALCNQ8IZF0 1738 aa28.55■■■□□ 2.16
TRAK1-207ENST00000469506 DCCP43146 1447 aa28.55■■■□□ 2.16
TRAK1-207ENST00000469506 MST1RQ04912 1400 aa28.55■■■□□ 2.16
TRAK1-207ENST00000469506 ASXL1Q8IXJ9 1541 aa28.53■■■□□ 2.16
TRAK1-207ENST00000469506 SPATA31A6Q5VVP1 1343 aa28.52■■■□□ 2.16
TRAK1-207ENST00000469506 NHSL1Q5SYE7 1610 aa28.52■■■□□ 2.16
TRAK1-207ENST00000469506 HFM1A2PYH4 1435 aa28.52■■■□□ 2.16
TRAK1-207ENST00000469506 TRIM52Q96A61 297 aa28.5■■■□□ 2.15
TRAK1-207ENST00000469506 ADGRL3Q9HAR2 1447 aa28.48■■■□□ 2.15
TRAK1-207ENST00000469506 DDX17Q92841 729 aaKnown RBP28.47■■■□□ 2.15
TRAK1-207ENST00000469506 PPLO60437 1756 aa28.47■■■□□ 2.15
TRAK1-207ENST00000469506 SETD5Q9C0A6 1442 aa28.43■■■□□ 2.14
TRAK1-207ENST00000469506 SLC4A1APQ9BWU0 796 aaKnown RBP28.43■■■□□ 2.14
TRAK1-207ENST00000469506 ROBO2Q9HCK4 1378 aa28.42■■■□□ 2.14
TRAK1-207ENST00000469506 NUTM2BA6NNL0 878 aaPredicted RBP28.42■■■□□ 2.14
TRAK1-207ENST00000469506 NUTM2EB1AL46 878 aaPredicted RBP28.42■■■□□ 2.14
TRAK1-207ENST00000469506 FOXD1Q16676 465 aa28.42■■■□□ 2.14
TRAK1-207ENST00000469506 MEX3CQ5U5Q3 659 aaKnown RBP28.42■■■□□ 2.14
TRAK1-207ENST00000469506 NUTM2AQ8IVF1 878 aaPredicted RBP28.42■■■□□ 2.14
TRAK1-207ENST00000469506 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
TRAK1-207ENST00000469506 PTCH1Q13635 1447 aa28.37■■■□□ 2.13
TRAK1-207ENST00000469506 C1orf167Q5SNV9 1468 aa28.37■■■□□ 2.13
TRAK1-207ENST00000469506 ZNF772Q68DY9 489 aaPredicted RBP28.36■■■□□ 2.13
TRAK1-207ENST00000469506 RPGRIP1LQ68CZ1 1315 aa28.36■■■□□ 2.13
TRAK1-207ENST00000469506 LAMC1P11047 1609 aa28.34■■■□□ 2.13
TRAK1-207ENST00000469506 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
TRAK1-207ENST00000469506 LRRC59Q96AG4 307 aaKnown RBP28.33■■■□□ 2.13
TRAK1-207ENST00000469506 PNPLA6Q8IY17 1366 aa28.33■■■□□ 2.13
TRAK1-207ENST00000469506 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
TRAK1-207ENST00000469506 AFF2P51816 1311 aa28.31■■■□□ 2.12
TRAK1-207ENST00000469506 IFT172Q9UG01 1749 aa28.3■■■□□ 2.12
TRAK1-207ENST00000469506 ADGRF5Q8IZF2 1346 aa28.3■■■□□ 2.12
TRAK1-207ENST00000469506 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.12
TRAK1-207ENST00000469506 RXRBP28702 533 aa28.25■■■□□ 2.11
TRAK1-207ENST00000469506 SOS2Q07890 1332 aaPredicted RBP28.24■■■□□ 2.11
TRAK1-207ENST00000469506 RGL3Q3MIN7 710 aa28.24■■■□□ 2.11
TRAK1-207ENST00000469506 UPF1Q92900 1129 aaKnown RBP eCLIP28.24■■■□□ 2.11
TRAK1-207ENST00000469506 MPHOSPH9Q99550 1183 aa28.24■■■□□ 2.11
TRAK1-207ENST00000469506 C8orf37Q96NL8 207 aa28.22■■■□□ 2.11
TRAK1-207ENST00000469506 CCDC144AA2RUR9 1427 aa28.21■■■□□ 2.11
TRAK1-207ENST00000469506 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
TRAK1-207ENST00000469506 ADAMTS2O95450 1211 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms