RNA–Protein interactions for RNA: ENST00000468599.1

CNOT10-211, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-211ENST00000468599 IQSEC2Q5JU85 1478 aa16.72■□□□□ 0.27
CNOT10-211ENST00000468599 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
CNOT10-211ENST00000468599 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
CNOT10-211ENST00000468599 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
CNOT10-211ENST00000468599 SCAF11Q99590 1463 aaKnown RBP16.71■□□□□ 0.27
CNOT10-211ENST00000468599 PPLO60437 1756 aa16.71■□□□□ 0.27
CNOT10-211ENST00000468599 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
CNOT10-211ENST00000468599 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
CNOT10-211ENST00000468599 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
CNOT10-211ENST00000468599 MED14O60244 1454 aa16.69■□□□□ 0.26
CNOT10-211ENST00000468599 THEMISQ8N1K5 641 aaPredicted RBP16.69■□□□□ 0.26
CNOT10-211ENST00000468599 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
CNOT10-211ENST00000468599 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
CNOT10-211ENST00000468599 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
CNOT10-211ENST00000468599 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
CNOT10-211ENST00000468599 LTKP29376 864 aa16.67■□□□□ 0.26
CNOT10-211ENST00000468599 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
CNOT10-211ENST00000468599 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
CNOT10-211ENST00000468599 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
CNOT10-211ENST00000468599 NPHP4O75161 1426 aaPredicted RBP16.65■□□□□ 0.26
CNOT10-211ENST00000468599 SETD1AO15047 1707 aaKnown RBP16.63■□□□□ 0.25
CNOT10-211ENST00000468599 STRCP1A6NGW2 1772 aa16.63■□□□□ 0.25
CNOT10-211ENST00000468599 SETBP1Q9Y6X0 1596 aa16.61■□□□□ 0.25
CNOT10-211ENST00000468599 NUTM2DQ5VT03 806 aaPredicted RBP16.6■□□□□ 0.25
CNOT10-211ENST00000468599 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
CNOT10-211ENST00000468599 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
CNOT10-211ENST00000468599 PIP4K2BP78356 416 aa16.59■□□□□ 0.25
CNOT10-211ENST00000468599 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
CNOT10-211ENST00000468599 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
CNOT10-211ENST00000468599 DIP2AQ14689 1571 aa16.57■□□□□ 0.24
CNOT10-211ENST00000468599 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
CNOT10-211ENST00000468599 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
CNOT10-211ENST00000468599 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
CNOT10-211ENST00000468599 CPS1P31327 1500 aa16.55■□□□□ 0.24
CNOT10-211ENST00000468599 MYOM2P54296 1465 aa16.55■□□□□ 0.24
CNOT10-211ENST00000468599 SOCS7O14512 581 aa16.54■□□□□ 0.24
CNOT10-211ENST00000468599 TOM1O60784 492 aa16.54■□□□□ 0.24
CNOT10-211ENST00000468599 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
CNOT10-211ENST00000468599 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
CNOT10-211ENST00000468599 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
CNOT10-211ENST00000468599 HSPA1LP34931 641 aa16.53■□□□□ 0.24
CNOT10-211ENST00000468599 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
CNOT10-211ENST00000468599 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
CNOT10-211ENST00000468599 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
CNOT10-211ENST00000468599 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
CNOT10-211ENST00000468599 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.24
CNOT10-211ENST00000468599 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
CNOT10-211ENST00000468599 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
CNOT10-211ENST00000468599 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
CNOT10-211ENST00000468599 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
CNOT10-211ENST00000468599 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
CNOT10-211ENST00000468599 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
CNOT10-211ENST00000468599 LAMC1P11047 1609 aa16.49■□□□□ 0.23
CNOT10-211ENST00000468599 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
CNOT10-211ENST00000468599 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
CNOT10-211ENST00000468599 METP08581 1390 aa16.46■□□□□ 0.23
CNOT10-211ENST00000468599 LRRC7Q96NW7 1537 aa16.45■□□□□ 0.22
CNOT10-211ENST00000468599 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
CNOT10-211ENST00000468599 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
CNOT10-211ENST00000468599 VGFO15240 615 aaPredicted RBP16.44■□□□□ 0.22
CNOT10-211ENST00000468599 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
CNOT10-211ENST00000468599 BCANQ96GW7 911 aa16.43■□□□□ 0.22
CNOT10-211ENST00000468599 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
CNOT10-211ENST00000468599 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
CNOT10-211ENST00000468599 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CNOT10-211ENST00000468599 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
CNOT10-211ENST00000468599 PIK3R4Q99570 1358 aa16.41■□□□□ 0.22
CNOT10-211ENST00000468599 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
CNOT10-211ENST00000468599 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
CNOT10-211ENST00000468599 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
CNOT10-211ENST00000468599 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
CNOT10-211ENST00000468599 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
CNOT10-211ENST00000468599 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
CNOT10-211ENST00000468599 KCNA6P17658 529 aa16.37■□□□□ 0.21
CNOT10-211ENST00000468599 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
CNOT10-211ENST00000468599 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
CNOT10-211ENST00000468599 ARHGEF28Q8N1W1 1705 aaKnown RBP16.36■□□□□ 0.21
CNOT10-211ENST00000468599 PTCH1Q13635 1447 aa16.36■□□□□ 0.21
CNOT10-211ENST00000468599 C14orf93Q9H972 538 aaKnown RBP16.35■□□□□ 0.21
CNOT10-211ENST00000468599 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
CNOT10-211ENST00000468599 TECPR2O15040 1411 aa16.35■□□□□ 0.21
CNOT10-211ENST00000468599 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
CNOT10-211ENST00000468599 RBM33Q96EV2 1170 aaKnown RBP16.34■□□□□ 0.21
CNOT10-211ENST00000468599 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
CNOT10-211ENST00000468599 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
CNOT10-211ENST00000468599 YTHDC2Q9H6S0 1430 aaKnown RBP16.34■□□□□ 0.21
CNOT10-211ENST00000468599 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
CNOT10-211ENST00000468599 AMOTL2Q9Y2J4 779 aa16.33■□□□□ 0.2
CNOT10-211ENST00000468599 LRPPRCP42704 1394 aaKnown RBP16.33■□□□□ 0.2
CNOT10-211ENST00000468599 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.32■□□□□ 0.2
CNOT10-211ENST00000468599 PROSER2Q86WR7 435 aaPredicted RBP16.31■□□□□ 0.2
CNOT10-211ENST00000468599 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
CNOT10-211ENST00000468599 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
CNOT10-211ENST00000468599 NBPF8Q3BBV2 869 aa16.3■□□□□ 0.2
CNOT10-211ENST00000468599 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
CNOT10-211ENST00000468599 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
CNOT10-211ENST00000468599 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
CNOT10-211ENST00000468599 KCNA4P22459 653 aa16.27■□□□□ 0.2
CNOT10-211ENST00000468599 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.2
CNOT10-211ENST00000468599 ADGRL3Q9HAR2 1447 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms