RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
SSBP1-207ENST00000468267 LRRC7Q96NW7 1537 aa25.72■■□□□ 1.71
SSBP1-207ENST00000468267 TRIM52Q96A61 297 aa25.71■■□□□ 1.71
SSBP1-207ENST00000468267 SLC26A8Q96RN1 970 aa25.7■■□□□ 1.7
SSBP1-207ENST00000468267 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
SSBP1-207ENST00000468267 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
SSBP1-207ENST00000468267 TOM1O60784 492 aa25.68■■□□□ 1.7
SSBP1-207ENST00000468267 PPP1R15AO75807 674 aaPredicted RBP25.68■■□□□ 1.7
SSBP1-207ENST00000468267 BCANQ96GW7 911 aa25.67■■□□□ 1.7
SSBP1-207ENST00000468267 KCNA6P17658 529 aa25.65■■□□□ 1.7
SSBP1-207ENST00000468267 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
SSBP1-207ENST00000468267 TRPM2O94759 1503 aa25.63■■□□□ 1.69
SSBP1-207ENST00000468267 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
SSBP1-207ENST00000468267 XIRP1Q702N8 1843 aaKnown RBP25.62■■□□□ 1.69
SSBP1-207ENST00000468267 CLTCL1P53675 1640 aa25.61■■□□□ 1.69
SSBP1-207ENST00000468267 ALKQ9UM73 1620 aa25.6■■□□□ 1.69
SSBP1-207ENST00000468267 PIP4K2BP78356 416 aa25.6■■□□□ 1.69
SSBP1-207ENST00000468267 TBX22Q9Y458 520 aa25.59■■□□□ 1.69
SSBP1-207ENST00000468267 SCAF1Q9H7N4 1312 aaKnown RBP25.59■■□□□ 1.69
SSBP1-207ENST00000468267 CHD2O14647 1828 aaKnown RBP25.58■■□□□ 1.68
SSBP1-207ENST00000468267 NWD1Q149M9 1564 aa25.57■■□□□ 1.68
SSBP1-207ENST00000468267 KIF1BO60333 1816 aa25.57■■□□□ 1.68
SSBP1-207ENST00000468267 ZNF326Q5BKZ1 582 aaKnown RBP25.56■■□□□ 1.68
SSBP1-207ENST00000468267 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
SSBP1-207ENST00000468267 PROSER2Q86WR7 435 aaPredicted RBP25.55■■□□□ 1.68
SSBP1-207ENST00000468267 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
SSBP1-207ENST00000468267 TMEM94Q12767 1356 aa25.54■■□□□ 1.68
SSBP1-207ENST00000468267 DIP2AQ14689 1571 aa25.53■■□□□ 1.68
SSBP1-207ENST00000468267 SETD5Q9C0A6 1442 aa25.52■■□□□ 1.68
SSBP1-207ENST00000468267 MPHOSPH9Q99550 1183 aa25.51■■□□□ 1.67
SSBP1-207ENST00000468267 ACIN1Q9UKV3 1341 aaKnown RBP25.51■■□□□ 1.67
SSBP1-207ENST00000468267 HSPA1LP34931 641 aa25.5■■□□□ 1.67
SSBP1-207ENST00000468267 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
SSBP1-207ENST00000468267 RBM33Q96EV2 1170 aaKnown RBP25.48■■□□□ 1.67
SSBP1-207ENST00000468267 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
SSBP1-207ENST00000468267 SETBP1Q9Y6X0 1596 aa25.47■■□□□ 1.67
SSBP1-207ENST00000468267 NRXN3Q9Y4C0 1643 aa25.46■■□□□ 1.67
SSBP1-207ENST00000468267 RPGRIP1LQ68CZ1 1315 aa25.41■■□□□ 1.66
SSBP1-207ENST00000468267 AMOTL2Q9Y2J4 779 aa25.41■■□□□ 1.66
SSBP1-207ENST00000468267 RAB3GAP2Q9H2M9 1393 aa25.41■■□□□ 1.66
SSBP1-207ENST00000468267 PTPRUQ92729 1446 aa25.4■■□□□ 1.66
SSBP1-207ENST00000468267 VGFO15240 615 aaPredicted RBP25.4■■□□□ 1.66
SSBP1-207ENST00000468267 MSH6P52701 1360 aa25.4■■□□□ 1.66
SSBP1-207ENST00000468267 NCOA3Q9Y6Q9 1424 aa25.39■■□□□ 1.66
SSBP1-207ENST00000468267 CCDC144AA2RUR9 1427 aa25.38■■□□□ 1.65
SSBP1-207ENST00000468267 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
SSBP1-207ENST00000468267 DISP3Q9P2K9 1392 aa25.37■■□□□ 1.65
SSBP1-207ENST00000468267 PPLO60437 1756 aa25.36■■□□□ 1.65
SSBP1-207ENST00000468267 METP08581 1390 aa25.36■■□□□ 1.65
SSBP1-207ENST00000468267 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
SSBP1-207ENST00000468267 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
SSBP1-207ENST00000468267 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
SSBP1-207ENST00000468267 SLAIN2Q9P270 581 aa25.32■■□□□ 1.64
SSBP1-207ENST00000468267 C19orf44Q9H6X5 657 aa25.31■■□□□ 1.64
SSBP1-207ENST00000468267 HRCP23327 699 aa25.3■■□□□ 1.64
SSBP1-207ENST00000468267 RGL3Q3MIN7 710 aa25.3■■□□□ 1.64
SSBP1-207ENST00000468267 ROBO1Q9Y6N7 1651 aa25.29■■□□□ 1.64
SSBP1-207ENST00000468267 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.29■■□□□ 1.64
SSBP1-207ENST00000468267 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
SSBP1-207ENST00000468267 ATF3P18847 181 aa25.25■■□□□ 1.63
SSBP1-207ENST00000468267 CADPS2Q86UW7 1296 aa25.25■■□□□ 1.63
SSBP1-207ENST00000468267 ANKRD30BQ9BXX2 1392 aa25.25■■□□□ 1.63
SSBP1-207ENST00000468267 IFT172Q9UG01 1749 aa25.25■■□□□ 1.63
SSBP1-207ENST00000468267 ADGRF5Q8IZF2 1346 aa25.24■■□□□ 1.63
SSBP1-207ENST00000468267 MED1Q15648 1581 aaPredicted RBP25.21■■□□□ 1.63
SSBP1-207ENST00000468267 DCCP43146 1447 aa25.2■■□□□ 1.62
SSBP1-207ENST00000468267 ILDR2Q71H61 639 aa25.18■■□□□ 1.62
SSBP1-207ENST00000468267 PTCH1Q13635 1447 aa25.18■■□□□ 1.62
SSBP1-207ENST00000468267 PRAG1Q86YV5 1406 aa25.17■■□□□ 1.62
SSBP1-207ENST00000468267 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
SSBP1-207ENST00000468267 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
SSBP1-207ENST00000468267 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
SSBP1-207ENST00000468267 NALCNQ8IZF0 1738 aa25.14■■□□□ 1.61
SSBP1-207ENST00000468267 PIK3C2GO75747 1445 aa25.13■■□□□ 1.61
SSBP1-207ENST00000468267 MST1RQ04912 1400 aa25.11■■□□□ 1.61
SSBP1-207ENST00000468267 BRINP3Q76B58 766 aa25.1■■□□□ 1.61
SSBP1-207ENST00000468267 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
SSBP1-207ENST00000468267 MYOM2P54296 1465 aa25.09■■□□□ 1.61
SSBP1-207ENST00000468267 LRPPRCP42704 1394 aaKnown RBP25.07■■□□□ 1.6
SSBP1-207ENST00000468267 TMEM132EQ6IEE7 984 aa25.07■■□□□ 1.6
SSBP1-207ENST00000468267 C14orf93Q9H972 538 aaKnown RBP25.07■■□□□ 1.6
SSBP1-207ENST00000468267 STK26Q9P289 416 aa25.07■■□□□ 1.6
SSBP1-207ENST00000468267 COL16A1Q07092 1604 aaPredicted RBP25.07■■□□□ 1.6
SSBP1-207ENST00000468267 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
SSBP1-207ENST00000468267 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
SSBP1-207ENST00000468267 ABCC11Q96J66 1382 aa25.05■■□□□ 1.6
SSBP1-207ENST00000468267 TECPR2O15040 1411 aa25.05■■□□□ 1.6
SSBP1-207ENST00000468267 JCADQ9P266 1359 aa25.04■■□□□ 1.6
SSBP1-207ENST00000468267 CFAP70Q5T0N1 1121 aa25.02■■□□□ 1.6
SSBP1-207ENST00000468267 KNDC1Q76NI1 1749 aa25.02■■□□□ 1.6
SSBP1-207ENST00000468267 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
SSBP1-207ENST00000468267 LAMC1P11047 1609 aa25.01■■□□□ 1.59
SSBP1-207ENST00000468267 C1orf167Q5SNV9 1468 aa25.01■■□□□ 1.59
SSBP1-207ENST00000468267 WAPLQ7Z5K2 1190 aa25■■□□□ 1.59
SSBP1-207ENST00000468267 DCAF11Q8TEB1 546 aa24.99■■□□□ 1.59
SSBP1-207ENST00000468267 NHSL1Q5SYE7 1610 aa24.98■■□□□ 1.59
SSBP1-207ENST00000468267 SIRT1Q96EB6 747 aa24.98■■□□□ 1.59
SSBP1-207ENST00000468267 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
SSBP1-207ENST00000468267 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
SSBP1-207ENST00000468267 KDM2AQ9Y2K7 1162 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms