RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 LRP6O75581 1613 aa21.39■■□□□ 1.01
RPP40-204ENST00000468105 COL16A1Q07092 1604 aaPredicted RBP21.37■■□□□ 1.01
RPP40-204ENST00000468105 FGD6Q6ZV73 1430 aa21.37■■□□□ 1.01
RPP40-204ENST00000468105 KANK1Q14678 1352 aa21.36■■□□□ 1.01
RPP40-204ENST00000468105 CHD2O14647 1828 aaKnown RBP21.36■■□□□ 1.01
RPP40-204ENST00000468105 MSH6P52701 1360 aa21.34■■□□□ 1.01
RPP40-204ENST00000468105 JCADQ9P266 1359 aa21.33■■□□□ 1
RPP40-204ENST00000468105 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
RPP40-204ENST00000468105 GCC2Q8IWJ2 1684 aa21.31■■□□□ 1
RPP40-204ENST00000468105 TMEM131LA2VDJ0 1609 aa21.31■■□□□ 1
RPP40-204ENST00000468105 PLEKHG1Q9ULL1 1385 aa21.31■■□□□ 1
RPP40-204ENST00000468105 RIMS2Q9UQ26 1411 aa21.3■■□□□ 1
RPP40-204ENST00000468105 BCANQ96GW7 911 aa21.3■■□□□ 1
RPP40-204ENST00000468105 SLC52A1Q9NWF4 448 aa21.3■■□□□ 1
RPP40-204ENST00000468105 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
RPP40-204ENST00000468105 NUTM2DQ5VT03 806 aaPredicted RBP21.29■■□□□ 1
RPP40-204ENST00000468105 ADGRL2O95490 1459 aa21.28■■□□□ 1
RPP40-204ENST00000468105 UPF1Q92900 1129 aaKnown RBP eCLIP21.27■■□□□ 1
RPP40-204ENST00000468105 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
RPP40-204ENST00000468105 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
RPP40-204ENST00000468105 TBX22Q9Y458 520 aa21.24■□□□□ 0.99
RPP40-204ENST00000468105 TRIM52Q96A61 297 aa21.23■□□□□ 0.99
RPP40-204ENST00000468105 RPRD2Q5VT52 1461 aaKnown RBP21.23■□□□□ 0.99
RPP40-204ENST00000468105 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
RPP40-204ENST00000468105 AHDC1Q5TGY3 1603 aaPredicted RBP21.22■□□□□ 0.99
RPP40-204ENST00000468105 ANKRD50Q9ULJ7 1429 aa21.22■□□□□ 0.99
RPP40-204ENST00000468105 SHPRHQ149N8 1683 aa21.2■□□□□ 0.98
RPP40-204ENST00000468105 E9PCH4 1651 aa21.19■□□□□ 0.98
RPP40-204ENST00000468105 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
RPP40-204ENST00000468105 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
RPP40-204ENST00000468105 NCOA3Q9Y6Q9 1424 aa21.19■□□□□ 0.98
RPP40-204ENST00000468105 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
RPP40-204ENST00000468105 CHGAP10645 457 aaKnown RBP21.17■□□□□ 0.98
RPP40-204ENST00000468105 C19orf44Q9H6X5 657 aa21.16■□□□□ 0.98
RPP40-204ENST00000468105 UNC13BO14795 1591 aa21.15■□□□□ 0.98
RPP40-204ENST00000468105 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
RPP40-204ENST00000468105 MEX3CQ5U5Q3 659 aaKnown RBP21.14■□□□□ 0.97
RPP40-204ENST00000468105 C14orf37Q86TY3 774 aa21.14■□□□□ 0.97
RPP40-204ENST00000468105 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
RPP40-204ENST00000468105 SRCAPQ6ZRS2 3230 aa21.13■□□□□ 0.97
RPP40-204ENST00000468105 NUTM2BA6NNL0 878 aaPredicted RBP21.13■□□□□ 0.97
RPP40-204ENST00000468105 NUTM2EB1AL46 878 aaPredicted RBP21.13■□□□□ 0.97
RPP40-204ENST00000468105 ZNF772Q68DY9 489 aaPredicted RBP21.13■□□□□ 0.97
RPP40-204ENST00000468105 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
RPP40-204ENST00000468105 NUTM2AQ8IVF1 878 aaPredicted RBP21.13■□□□□ 0.97
RPP40-204ENST00000468105 AMOTL2Q9Y2J4 779 aa21.13■□□□□ 0.97
RPP40-204ENST00000468105 DDX17Q92841 729 aaKnown RBP21.12■□□□□ 0.97
RPP40-204ENST00000468105 APLP2Q06481 763 aa21.11■□□□□ 0.97
RPP40-204ENST00000468105 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
RPP40-204ENST00000468105 ATF3P18847 181 aa21.1■□□□□ 0.97
RPP40-204ENST00000468105 ASXL1Q8IXJ9 1541 aa21.09■□□□□ 0.97
RPP40-204ENST00000468105 RXRBP28702 533 aa21.09■□□□□ 0.97
RPP40-204ENST00000468105 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.09■□□□□ 0.97
RPP40-204ENST00000468105 MST1RQ04912 1400 aa21.09■□□□□ 0.97
RPP40-204ENST00000468105 AFF2P51816 1311 aa21.08■□□□□ 0.97
RPP40-204ENST00000468105 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
RPP40-204ENST00000468105 XRN1Q8IZH2 1706 aaKnown RBP21.08■□□□□ 0.97
RPP40-204ENST00000468105 TRPM2O94759 1503 aa21.07■□□□□ 0.96
RPP40-204ENST00000468105 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
RPP40-204ENST00000468105 SETD5Q9C0A6 1442 aa21.06■□□□□ 0.96
RPP40-204ENST00000468105 NHSL1Q5SYE7 1610 aa21.06■□□□□ 0.96
RPP40-204ENST00000468105 METP08581 1390 aa21.06■□□□□ 0.96
RPP40-204ENST00000468105 RGS12O14924 1447 aa21.04■□□□□ 0.96
RPP40-204ENST00000468105 CDK12Q9NYV4 1490 aaPredicted RBP21.04■□□□□ 0.96
RPP40-204ENST00000468105 DCCP43146 1447 aa21.01■□□□□ 0.95
RPP40-204ENST00000468105 SETBP1Q9Y6X0 1596 aa21.01■□□□□ 0.95
RPP40-204ENST00000468105 PNPLA6Q8IY17 1366 aa21■□□□□ 0.95
RPP40-204ENST00000468105 NUP155O75694 1391 aa20.98■□□□□ 0.95
RPP40-204ENST00000468105 NALCNQ8IZF0 1738 aa20.98■□□□□ 0.95
RPP40-204ENST00000468105 C8orf37Q96NL8 207 aa20.98■□□□□ 0.95
RPP40-204ENST00000468105 QTRT2Q9H974 415 aaKnown RBP20.97■□□□□ 0.95
RPP40-204ENST00000468105 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
RPP40-204ENST00000468105 LRRC59Q96AG4 307 aaKnown RBP20.94■□□□□ 0.94
RPP40-204ENST00000468105 ADGRL3Q9HAR2 1447 aa20.94■□□□□ 0.94
RPP40-204ENST00000468105 RBM6P78332 1123 aaKnown RBP20.93■□□□□ 0.94
RPP40-204ENST00000468105 ADAMTS2O95450 1211 aa20.92■□□□□ 0.94
RPP40-204ENST00000468105 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
RPP40-204ENST00000468105 SPHKAPQ2M3C7 1700 aa20.92■□□□□ 0.94
RPP40-204ENST00000468105 C1orf167Q5SNV9 1468 aa20.91■□□□□ 0.94
RPP40-204ENST00000468105 ORAI2Q96SN7 254 aa20.9■□□□□ 0.94
RPP40-204ENST00000468105 CLTCL1P53675 1640 aa20.89■□□□□ 0.94
RPP40-204ENST00000468105 ITGAEP38570 1179 aa20.89■□□□□ 0.93
RPP40-204ENST00000468105 LAMC1P11047 1609 aa20.89■□□□□ 0.93
RPP40-204ENST00000468105 EP400Q96L91 3159 aa20.88■□□□□ 0.93
RPP40-204ENST00000468105 ZNF326Q5BKZ1 582 aaKnown RBP20.88■□□□□ 0.93
RPP40-204ENST00000468105 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
RPP40-204ENST00000468105 SOS2Q07890 1332 aaPredicted RBP20.86■□□□□ 0.93
RPP40-204ENST00000468105 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
RPP40-204ENST00000468105 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
RPP40-204ENST00000468105 FNBP4Q8N3X1 1017 aaPredicted RBP20.81■□□□□ 0.92
RPP40-204ENST00000468105 USP21Q9UK80 565 aa20.81■□□□□ 0.92
RPP40-204ENST00000468105 ATRNO75882 1429 aa20.8■□□□□ 0.92
RPP40-204ENST00000468105 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
RPP40-204ENST00000468105 BCL9LQ86UU0 1499 aa20.78■□□□□ 0.92
RPP40-204ENST00000468105 COL22A1Q8NFW1 1626 aaPredicted RBP20.78■□□□□ 0.92
RPP40-204ENST00000468105 MYOM2P54296 1465 aa20.76■□□□□ 0.91
RPP40-204ENST00000468105 ATAD2Q6PL18 1390 aa20.76■□□□□ 0.91
RPP40-204ENST00000468105 TRPC5Q9UL62 973 aaPredicted RBP20.75■□□□□ 0.91
RPP40-204ENST00000468105 XPCQ01831 940 aaPredicted RBP20.74■□□□□ 0.91
RPP40-204ENST00000468105 PRAG1Q86YV5 1406 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms