RNA–Protein interactions for RNA: ENST00000467949.1

TSC2-211, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-211ENST00000467949 APLP2Q06481 763 aa21.56■■□□□ 1.04
TSC2-211ENST00000467949 SETD1AO15047 1707 aaKnown RBP21.55■■□□□ 1.04
TSC2-211ENST00000467949 KCNA6P17658 529 aa21.55■■□□□ 1.04
TSC2-211ENST00000467949 TMEM131LA2VDJ0 1609 aa21.52■■□□□ 1.04
TSC2-211ENST00000467949 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.04
TSC2-211ENST00000467949 RPRD2Q5VT52 1461 aaKnown RBP21.52■■□□□ 1.03
TSC2-211ENST00000467949 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
TSC2-211ENST00000467949 UNC13BO14795 1591 aa21.5■■□□□ 1.03
TSC2-211ENST00000467949 E9PCH4 1651 aa21.49■■□□□ 1.03
TSC2-211ENST00000467949 MSH6P52701 1360 aa21.48■■□□□ 1.03
TSC2-211ENST00000467949 ANKRD50Q9ULJ7 1429 aa21.48■■□□□ 1.03
TSC2-211ENST00000467949 POTEAQ6S8J7 498 aa21.48■■□□□ 1.03
TSC2-211ENST00000467949 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
TSC2-211ENST00000467949 BCANQ96GW7 911 aa21.47■■□□□ 1.03
TSC2-211ENST00000467949 PLEKHG1Q9ULL1 1385 aa21.47■■□□□ 1.03
TSC2-211ENST00000467949 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
TSC2-211ENST00000467949 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
TSC2-211ENST00000467949 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
TSC2-211ENST00000467949 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.42■■□□□ 1.02
TSC2-211ENST00000467949 IQGAP3Q86VI3 1631 aa21.41■■□□□ 1.02
TSC2-211ENST00000467949 DIP2AQ14689 1571 aa21.41■■□□□ 1.02
TSC2-211ENST00000467949 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
TSC2-211ENST00000467949 SLAIN2Q9P270 581 aa21.39■■□□□ 1.01
TSC2-211ENST00000467949 JCADQ9P266 1359 aa21.38■■□□□ 1.01
TSC2-211ENST00000467949 LRP6O75581 1613 aa21.38■■□□□ 1.01
TSC2-211ENST00000467949 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
TSC2-211ENST00000467949 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
TSC2-211ENST00000467949 AHDC1Q5TGY3 1603 aaPredicted RBP21.37■■□□□ 1.01
TSC2-211ENST00000467949 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
TSC2-211ENST00000467949 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
TSC2-211ENST00000467949 TRPM2O94759 1503 aa21.34■■□□□ 1.01
TSC2-211ENST00000467949 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
TSC2-211ENST00000467949 NCOA3Q9Y6Q9 1424 aa21.31■■□□□ 1
TSC2-211ENST00000467949 C14orf37Q86TY3 774 aa21.31■■□□□ 1
TSC2-211ENST00000467949 TBX22Q9Y458 520 aa21.31■■□□□ 1
TSC2-211ENST00000467949 SPHKAPQ2M3C7 1700 aa21.31■■□□□ 1
TSC2-211ENST00000467949 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
TSC2-211ENST00000467949 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
TSC2-211ENST00000467949 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.29■■□□□ 1
TSC2-211ENST00000467949 PTPRUQ92729 1446 aa21.28■■□□□ 1
TSC2-211ENST00000467949 PIK3R4Q99570 1358 aa21.27■■□□□ 1
TSC2-211ENST00000467949 ROCK1Q13464 1354 aa21.26■□□□□ 0.99
TSC2-211ENST00000467949 NHSL1Q5SYE7 1610 aa21.25■□□□□ 0.99
TSC2-211ENST00000467949 SPATA31A6Q5VVP1 1343 aa21.25■□□□□ 0.99
TSC2-211ENST00000467949 SETBP1Q9Y6X0 1596 aa21.24■□□□□ 0.99
TSC2-211ENST00000467949 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
TSC2-211ENST00000467949 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
TSC2-211ENST00000467949 CADPS2Q86UW7 1296 aa21.23■□□□□ 0.99
TSC2-211ENST00000467949 NALCNQ8IZF0 1738 aa21.22■□□□□ 0.99
TSC2-211ENST00000467949 ATF3P18847 181 aa21.22■□□□□ 0.99
TSC2-211ENST00000467949 C19orf44Q9H6X5 657 aa21.22■□□□□ 0.99
TSC2-211ENST00000467949 NUP155O75694 1391 aa21.22■□□□□ 0.99
TSC2-211ENST00000467949 DCCP43146 1447 aa21.21■□□□□ 0.99
TSC2-211ENST00000467949 AMOTL2Q9Y2J4 779 aa21.2■□□□□ 0.98
TSC2-211ENST00000467949 BRINP3Q76B58 766 aa21.19■□□□□ 0.98
TSC2-211ENST00000467949 CLTCL1P53675 1640 aa21.18■□□□□ 0.98
TSC2-211ENST00000467949 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
TSC2-211ENST00000467949 MST1RQ04912 1400 aa21.17■□□□□ 0.98
TSC2-211ENST00000467949 ZNF772Q68DY9 489 aaPredicted RBP21.16■□□□□ 0.98
TSC2-211ENST00000467949 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
TSC2-211ENST00000467949 ITGAEP38570 1179 aa21.15■□□□□ 0.98
TSC2-211ENST00000467949 KIF1BO60333 1816 aa21.15■□□□□ 0.98
TSC2-211ENST00000467949 NUTM2BA6NNL0 878 aaPredicted RBP21.14■□□□□ 0.97
TSC2-211ENST00000467949 NUTM2EB1AL46 878 aaPredicted RBP21.14■□□□□ 0.97
TSC2-211ENST00000467949 NUTM2AQ8IVF1 878 aaPredicted RBP21.14■□□□□ 0.97
TSC2-211ENST00000467949 METP08581 1390 aa21.13■□□□□ 0.97
TSC2-211ENST00000467949 SETD5Q9C0A6 1442 aa21.12■□□□□ 0.97
TSC2-211ENST00000467949 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
TSC2-211ENST00000467949 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.97
TSC2-211ENST00000467949 CDK12Q9NYV4 1490 aaPredicted RBP21.1■□□□□ 0.97
TSC2-211ENST00000467949 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
TSC2-211ENST00000467949 AFF2P51816 1311 aa21.08■□□□□ 0.97
TSC2-211ENST00000467949 RXRBP28702 533 aa21.07■□□□□ 0.96
TSC2-211ENST00000467949 DDX17Q92841 729 aaKnown RBP21.07■□□□□ 0.96
TSC2-211ENST00000467949 LAMC1P11047 1609 aa21.06■□□□□ 0.96
TSC2-211ENST00000467949 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
TSC2-211ENST00000467949 RGS12O14924 1447 aa21.05■□□□□ 0.96
TSC2-211ENST00000467949 PPARGC1BQ86YN6 1023 aaKnown RBP21.04■□□□□ 0.96
TSC2-211ENST00000467949 PPLO60437 1756 aa21.01■□□□□ 0.95
TSC2-211ENST00000467949 C8orf37Q96NL8 207 aa21.01■□□□□ 0.95
TSC2-211ENST00000467949 PTCH1Q13635 1447 aa21.01■□□□□ 0.95
TSC2-211ENST00000467949 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
TSC2-211ENST00000467949 LRRC59Q96AG4 307 aaKnown RBP21■□□□□ 0.95
TSC2-211ENST00000467949 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
TSC2-211ENST00000467949 COL22A1Q8NFW1 1626 aaPredicted RBP20.96■□□□□ 0.95
TSC2-211ENST00000467949 NAIPQ13075 1403 aa20.95■□□□□ 0.95
TSC2-211ENST00000467949 MARF1Q9Y4F3 1742 aaKnown RBP20.94■□□□□ 0.94
TSC2-211ENST00000467949 ADAMTS2O95450 1211 aa20.93■□□□□ 0.94
TSC2-211ENST00000467949 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
TSC2-211ENST00000467949 PRAG1Q86YV5 1406 aa20.93■□□□□ 0.94
TSC2-211ENST00000467949 RBM6P78332 1123 aaKnown RBP20.92■□□□□ 0.94
TSC2-211ENST00000467949 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
TSC2-211ENST00000467949 CDC42BPGQ6DT37 1551 aa20.91■□□□□ 0.94
TSC2-211ENST00000467949 ORAI2Q96SN7 254 aa20.91■□□□□ 0.94
TSC2-211ENST00000467949 SOS2Q07890 1332 aaPredicted RBP20.89■□□□□ 0.93
TSC2-211ENST00000467949 NGLY1Q96IV0 654 aa20.89■□□□□ 0.93
TSC2-211ENST00000467949 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
TSC2-211ENST00000467949 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
TSC2-211ENST00000467949 VGFO15240 615 aaPredicted RBP20.85■□□□□ 0.93
TSC2-211ENST00000467949 MYOM2P54296 1465 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms