RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 PROSER2Q86WR7 435 aaPredicted RBP29.17■■■□□ 2.26
COL1A2-204ENST00000467931 E9PCH4 1651 aa29.17■■■□□ 2.26
COL1A2-204ENST00000467931 NWD1Q149M9 1564 aa29.16■■■□□ 2.26
COL1A2-204ENST00000467931 TMEM131LA2VDJ0 1609 aa29.16■■■□□ 2.26
COL1A2-204ENST00000467931 PPP1R15AO75807 674 aaPredicted RBP29.14■■■□□ 2.26
COL1A2-204ENST00000467931 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
COL1A2-204ENST00000467931 ROBO1Q9Y6N7 1651 aa29.13■■■□□ 2.25
COL1A2-204ENST00000467931 RBM33Q96EV2 1170 aaKnown RBP29.13■■■□□ 2.25
COL1A2-204ENST00000467931 CHGAP10645 457 aaKnown RBP29.12■■■□□ 2.25
COL1A2-204ENST00000467931 CHD2O14647 1828 aaKnown RBP29.12■■■□□ 2.25
COL1A2-204ENST00000467931 IQGAP3Q86VI3 1631 aa29.12■■■□□ 2.25
COL1A2-204ENST00000467931 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
COL1A2-204ENST00000467931 ZFYVE9O95405 1425 aa29.11■■■□□ 2.25
COL1A2-204ENST00000467931 ITGAEP38570 1179 aa29.09■■■□□ 2.25
COL1A2-204ENST00000467931 ROCK1Q13464 1354 aa29.09■■■□□ 2.25
COL1A2-204ENST00000467931 HDGFP51858 240 aaKnown RBP29.08■■■□□ 2.25
COL1A2-204ENST00000467931 PLEKHG1Q9ULL1 1385 aa29.08■■■□□ 2.25
COL1A2-204ENST00000467931 FAM135BQ49AJ0 1406 aa29.08■■■□□ 2.25
COL1A2-204ENST00000467931 MSH6P52701 1360 aa29.05■■■□□ 2.24
COL1A2-204ENST00000467931 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
COL1A2-204ENST00000467931 NUP155O75694 1391 aa29.01■■■□□ 2.23
COL1A2-204ENST00000467931 NUTM2DQ5VT03 806 aaPredicted RBP29■■■□□ 2.23
COL1A2-204ENST00000467931 ABCF1Q8NE71 845 aaKnown RBP eCLIP29■■■□□ 2.23
COL1A2-204ENST00000467931 PHLPP1O60346 1717 aa29■■■□□ 2.23
COL1A2-204ENST00000467931 DIP2AQ14689 1571 aa28.97■■■□□ 2.23
COL1A2-204ENST00000467931 SPHKAPQ2M3C7 1700 aa28.97■■■□□ 2.23
COL1A2-204ENST00000467931 C14orf37Q86TY3 774 aa28.94■■■□□ 2.22
COL1A2-204ENST00000467931 TBX22Q9Y458 520 aa28.94■■■□□ 2.22
COL1A2-204ENST00000467931 SLAIN2Q9P270 581 aa28.92■■■□□ 2.22
COL1A2-204ENST00000467931 ADAMTS13Q76LX8 1427 aa28.91■■■□□ 2.22
COL1A2-204ENST00000467931 TRPM2O94759 1503 aa28.89■■■□□ 2.22
COL1A2-204ENST00000467931 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.89■■■□□ 2.22
COL1A2-204ENST00000467931 RGS17Q9UGC6 210 aaPredicted RBP28.88■■■□□ 2.21
COL1A2-204ENST00000467931 PIK3R4Q99570 1358 aa28.85■■■□□ 2.21
COL1A2-204ENST00000467931 NCOA3Q9Y6Q9 1424 aa28.85■■■□□ 2.21
COL1A2-204ENST00000467931 COL16A1Q07092 1604 aaPredicted RBP28.82■■■□□ 2.2
COL1A2-204ENST00000467931 ZNF326Q5BKZ1 582 aaKnown RBP28.81■■■□□ 2.2
COL1A2-204ENST00000467931 NRXN3Q9Y4C0 1643 aa28.8■■■□□ 2.2
COL1A2-204ENST00000467931 JCADQ9P266 1359 aa28.8■■■□□ 2.2
COL1A2-204ENST00000467931 KIF1BO60333 1816 aa28.8■■■□□ 2.2
COL1A2-204ENST00000467931 ATF3P18847 181 aa28.79■■■□□ 2.2
COL1A2-204ENST00000467931 CADPS2Q86UW7 1296 aa28.78■■■□□ 2.2
COL1A2-204ENST00000467931 AMOTL2Q9Y2J4 779 aa28.78■■■□□ 2.2
COL1A2-204ENST00000467931 CLTCL1P53675 1640 aa28.78■■■□□ 2.2
COL1A2-204ENST00000467931 SETBP1Q9Y6X0 1596 aa28.77■■■□□ 2.2
COL1A2-204ENST00000467931 C19orf44Q9H6X5 657 aa28.77■■■□□ 2.2
COL1A2-204ENST00000467931 XRN1Q8IZH2 1706 aaKnown RBP28.77■■■□□ 2.2
COL1A2-204ENST00000467931 PTPRUQ92729 1446 aa28.77■■■□□ 2.2
COL1A2-204ENST00000467931 POTEAQ6S8J7 498 aa28.76■■■□□ 2.19
COL1A2-204ENST00000467931 AHDC1Q5TGY3 1603 aaPredicted RBP28.73■■■□□ 2.19
COL1A2-204ENST00000467931 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
COL1A2-204ENST00000467931 SHPRHQ149N8 1683 aa28.7■■■□□ 2.19
COL1A2-204ENST00000467931 NEXMIFQ5QGS0 1516 aa28.69■■■□□ 2.18
COL1A2-204ENST00000467931 SETD1AO15047 1707 aaKnown RBP28.69■■■□□ 2.18
COL1A2-204ENST00000467931 NAIPQ13075 1403 aa28.69■■■□□ 2.18
COL1A2-204ENST00000467931 MEX3CQ5U5Q3 659 aaKnown RBP28.67■■■□□ 2.18
COL1A2-204ENST00000467931 DCCP43146 1447 aa28.66■■■□□ 2.18
COL1A2-204ENST00000467931 LRP6O75581 1613 aa28.65■■■□□ 2.18
COL1A2-204ENST00000467931 METP08581 1390 aa28.64■■■□□ 2.18
COL1A2-204ENST00000467931 TRIM52Q96A61 297 aa28.64■■■□□ 2.18
COL1A2-204ENST00000467931 SPATA31A6Q5VVP1 1343 aa28.64■■■□□ 2.17
COL1A2-204ENST00000467931 NALCNQ8IZF0 1738 aa28.63■■■□□ 2.17
COL1A2-204ENST00000467931 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
COL1A2-204ENST00000467931 ASXL1Q8IXJ9 1541 aa28.61■■■□□ 2.17
COL1A2-204ENST00000467931 NHSL1Q5SYE7 1610 aa28.59■■■□□ 2.17
COL1A2-204ENST00000467931 MST1RQ04912 1400 aa28.58■■■□□ 2.17
COL1A2-204ENST00000467931 ADGRL3Q9HAR2 1447 aa28.57■■■□□ 2.16
COL1A2-204ENST00000467931 HFM1A2PYH4 1435 aa28.56■■■□□ 2.16
COL1A2-204ENST00000467931 NUTM2BA6NNL0 878 aaPredicted RBP28.54■■■□□ 2.16
COL1A2-204ENST00000467931 NUTM2EB1AL46 878 aaPredicted RBP28.54■■■□□ 2.16
COL1A2-204ENST00000467931 NUTM2AQ8IVF1 878 aaPredicted RBP28.54■■■□□ 2.16
COL1A2-204ENST00000467931 PPLO60437 1756 aa28.54■■■□□ 2.16
COL1A2-204ENST00000467931 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
COL1A2-204ENST00000467931 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
COL1A2-204ENST00000467931 VGFO15240 615 aaPredicted RBP28.5■■■□□ 2.15
COL1A2-204ENST00000467931 SETD5Q9C0A6 1442 aa28.47■■■□□ 2.15
COL1A2-204ENST00000467931 PTCH1Q13635 1447 aa28.46■■■□□ 2.15
COL1A2-204ENST00000467931 DDX17Q92841 729 aaKnown RBP28.45■■■□□ 2.14
COL1A2-204ENST00000467931 LRRC59Q96AG4 307 aaKnown RBP28.44■■■□□ 2.14
COL1A2-204ENST00000467931 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
COL1A2-204ENST00000467931 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
COL1A2-204ENST00000467931 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
COL1A2-204ENST00000467931 FOXD1Q16676 465 aa28.4■■■□□ 2.14
COL1A2-204ENST00000467931 AFF2P51816 1311 aa28.4■■■□□ 2.14
COL1A2-204ENST00000467931 PNPLA6Q8IY17 1366 aa28.37■■■□□ 2.13
COL1A2-204ENST00000467931 RXRBP28702 533 aa28.37■■■□□ 2.13
COL1A2-204ENST00000467931 LAMC1P11047 1609 aa28.36■■■□□ 2.13
COL1A2-204ENST00000467931 CCDC144AA2RUR9 1427 aa28.35■■■□□ 2.13
COL1A2-204ENST00000467931 C8orf37Q96NL8 207 aa28.35■■■□□ 2.13
COL1A2-204ENST00000467931 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
COL1A2-204ENST00000467931 PRAG1Q86YV5 1406 aa28.34■■■□□ 2.13
COL1A2-204ENST00000467931 ORAI2Q96SN7 254 aa28.32■■■□□ 2.12
COL1A2-204ENST00000467931 RGL3Q3MIN7 710 aa28.31■■■□□ 2.12
COL1A2-204ENST00000467931 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
COL1A2-204ENST00000467931 CDK12Q9NYV4 1490 aaPredicted RBP28.28■■■□□ 2.12
COL1A2-204ENST00000467931 ADAMTS2O95450 1211 aa28.28■■■□□ 2.12
COL1A2-204ENST00000467931 ADGRF5Q8IZF2 1346 aa28.27■■■□□ 2.12
COL1A2-204ENST00000467931 UPF1Q92900 1129 aaKnown RBP eCLIP28.26■■■□□ 2.11
COL1A2-204ENST00000467931 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
COL1A2-204ENST00000467931 STK26Q9P289 416 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms