RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 NEURL4Q96JN8 1562 aa20■□□□□ 0.79
SSBP1-206ENST00000467681 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
SSBP1-206ENST00000467681 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
SSBP1-206ENST00000467681 BCANQ96GW7 911 aa19.98■□□□□ 0.79
SSBP1-206ENST00000467681 ZNF335Q9H4Z2 1342 aaPredicted RBP19.98■□□□□ 0.79
SSBP1-206ENST00000467681 CLTCL1P53675 1640 aa19.97■□□□□ 0.79
SSBP1-206ENST00000467681 RGL3Q3MIN7 710 aa19.96■□□□□ 0.79
SSBP1-206ENST00000467681 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
SSBP1-206ENST00000467681 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
SSBP1-206ENST00000467681 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
SSBP1-206ENST00000467681 VGFO15240 615 aaPredicted RBP19.94■□□□□ 0.78
SSBP1-206ENST00000467681 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SSBP1-206ENST00000467681 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
SSBP1-206ENST00000467681 POLR1AO95602 1720 aaPredicted RBP19.93■□□□□ 0.78
SSBP1-206ENST00000467681 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
SSBP1-206ENST00000467681 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
SSBP1-206ENST00000467681 SPATA31E1Q6ZUB1 1445 aa19.92■□□□□ 0.78
SSBP1-206ENST00000467681 IQGAP1P46940 1657 aa19.9■□□□□ 0.78
SSBP1-206ENST00000467681 KIF1BO60333 1816 aa19.89■□□□□ 0.77
SSBP1-206ENST00000467681 KCNA6P17658 529 aa19.89■□□□□ 0.77
SSBP1-206ENST00000467681 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
SSBP1-206ENST00000467681 ADAMTS13Q76LX8 1427 aa19.85■□□□□ 0.77
SSBP1-206ENST00000467681 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
SSBP1-206ENST00000467681 NEXMIFQ5QGS0 1516 aa19.84■□□□□ 0.77
SSBP1-206ENST00000467681 ADGRF5Q8IZF2 1346 aa19.83■□□□□ 0.77
SSBP1-206ENST00000467681 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
SSBP1-206ENST00000467681 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
SSBP1-206ENST00000467681 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
SSBP1-206ENST00000467681 PROSER2Q86WR7 435 aaPredicted RBP19.79■□□□□ 0.76
SSBP1-206ENST00000467681 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
SSBP1-206ENST00000467681 AMOTL2Q9Y2J4 779 aa19.79■□□□□ 0.76
SSBP1-206ENST00000467681 CPS1P31327 1500 aa19.79■□□□□ 0.76
SSBP1-206ENST00000467681 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
SSBP1-206ENST00000467681 FBXO41Q8TF61 875 aa19.77■□□□□ 0.76
SSBP1-206ENST00000467681 METP08581 1390 aa19.77■□□□□ 0.76
SSBP1-206ENST00000467681 SETBP1Q9Y6X0 1596 aa19.76■□□□□ 0.75
SSBP1-206ENST00000467681 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
SSBP1-206ENST00000467681 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
SSBP1-206ENST00000467681 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
SSBP1-206ENST00000467681 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
SSBP1-206ENST00000467681 PPLO60437 1756 aa19.73■□□□□ 0.75
SSBP1-206ENST00000467681 PTPRUQ92729 1446 aa19.73■□□□□ 0.75
SSBP1-206ENST00000467681 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
SSBP1-206ENST00000467681 DIP2AQ14689 1571 aa19.72■□□□□ 0.75
SSBP1-206ENST00000467681 RBM33Q96EV2 1170 aaKnown RBP19.72■□□□□ 0.75
SSBP1-206ENST00000467681 NRXN3Q9Y4C0 1643 aa19.72■□□□□ 0.75
SSBP1-206ENST00000467681 TMEM94Q12767 1356 aa19.71■□□□□ 0.75
SSBP1-206ENST00000467681 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
SSBP1-206ENST00000467681 UBAP1LF5GYI3 381 aa19.7■□□□□ 0.74
SSBP1-206ENST00000467681 ILDR1Q86SU0 546 aaPredicted RBP19.7■□□□□ 0.74
SSBP1-206ENST00000467681 L3MBTL2Q969R5 705 aa19.7■□□□□ 0.74
SSBP1-206ENST00000467681 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
SSBP1-206ENST00000467681 NRXN1Q9ULB1 1477 aa19.69■□□□□ 0.74
SSBP1-206ENST00000467681 TMEM132EQ6IEE7 984 aa19.69■□□□□ 0.74
SSBP1-206ENST00000467681 CHD2O14647 1828 aaKnown RBP19.69■□□□□ 0.74
SSBP1-206ENST00000467681 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
SSBP1-206ENST00000467681 MYOM2P54296 1465 aa19.68■□□□□ 0.74
SSBP1-206ENST00000467681 TOM1O60784 492 aa19.68■□□□□ 0.74
SSBP1-206ENST00000467681 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
SSBP1-206ENST00000467681 NWD1Q149M9 1564 aa19.66■□□□□ 0.74
SSBP1-206ENST00000467681 STK26Q9P289 416 aa19.65■□□□□ 0.74
SSBP1-206ENST00000467681 NCOA3Q9Y6Q9 1424 aa19.65■□□□□ 0.74
SSBP1-206ENST00000467681 IFT172Q9UG01 1749 aa19.65■□□□□ 0.74
SSBP1-206ENST00000467681 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.73
SSBP1-206ENST00000467681 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
SSBP1-206ENST00000467681 ABCC11Q96J66 1382 aa19.63■□□□□ 0.73
SSBP1-206ENST00000467681 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
SSBP1-206ENST00000467681 SIRT1Q96EB6 747 aa19.62■□□□□ 0.73
SSBP1-206ENST00000467681 ROBO2Q9HCK4 1378 aa19.6■□□□□ 0.73
SSBP1-206ENST00000467681 MSH6P52701 1360 aa19.59■□□□□ 0.73
SSBP1-206ENST00000467681 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
SSBP1-206ENST00000467681 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
SSBP1-206ENST00000467681 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
SSBP1-206ENST00000467681 SETD1AO15047 1707 aaKnown RBP19.58■□□□□ 0.72
SSBP1-206ENST00000467681 PRAG1Q86YV5 1406 aa19.58■□□□□ 0.72
SSBP1-206ENST00000467681 YTHDC2Q9H6S0 1430 aaKnown RBP19.58■□□□□ 0.72
SSBP1-206ENST00000467681 SLAIN2Q9P270 581 aa19.57■□□□□ 0.72
SSBP1-206ENST00000467681 XRN1Q8IZH2 1706 aaKnown RBP19.56■□□□□ 0.72
SSBP1-206ENST00000467681 ATF3P18847 181 aa19.56■□□□□ 0.72
SSBP1-206ENST00000467681 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
SSBP1-206ENST00000467681 CADPS2Q86UW7 1296 aa19.56■□□□□ 0.72
SSBP1-206ENST00000467681 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
SSBP1-206ENST00000467681 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
SSBP1-206ENST00000467681 TECPR2O15040 1411 aa19.55■□□□□ 0.72
SSBP1-206ENST00000467681 XIRP1Q702N8 1843 aaKnown RBP19.55■□□□□ 0.72
SSBP1-206ENST00000467681 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
SSBP1-206ENST00000467681 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
SSBP1-206ENST00000467681 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
SSBP1-206ENST00000467681 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
SSBP1-206ENST00000467681 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
SSBP1-206ENST00000467681 PRAM1Q96QH2 718 aa19.51■□□□□ 0.71
SSBP1-206ENST00000467681 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
SSBP1-206ENST00000467681 FAM135BQ49AJ0 1406 aa19.51■□□□□ 0.71
SSBP1-206ENST00000467681 ADGRB1O14514 1584 aa19.5■□□□□ 0.71
SSBP1-206ENST00000467681 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
SSBP1-206ENST00000467681 POGKQ9P215 609 aa19.5■□□□□ 0.71
SSBP1-206ENST00000467681 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
SSBP1-206ENST00000467681 LAMC1P11047 1609 aa19.48■□□□□ 0.71
SSBP1-206ENST00000467681 DCCP43146 1447 aa19.46■□□□□ 0.71
SSBP1-206ENST00000467681 SAFB2Q14151 953 aaKnown RBP eCLIP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms