RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
CTNS-205ENST00000467663 CHGAP10645 457 aaKnown RBP17.96■□□□□ 0.47
CTNS-205ENST00000467663 KCNA6P17658 529 aa17.96■□□□□ 0.47
CTNS-205ENST00000467663 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTNS-205ENST00000467663 ALKQ9UM73 1620 aa17.95■□□□□ 0.46
CTNS-205ENST00000467663 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
CTNS-205ENST00000467663 MYO5BQ9ULV0 1848 aa17.94■□□□□ 0.46
CTNS-205ENST00000467663 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
CTNS-205ENST00000467663 BCANQ96GW7 911 aa17.93■□□□□ 0.46
CTNS-205ENST00000467663 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
CTNS-205ENST00000467663 TBX22Q9Y458 520 aa17.91■□□□□ 0.46
CTNS-205ENST00000467663 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
CTNS-205ENST00000467663 HSPA1LP34931 641 aa17.9■□□□□ 0.46
CTNS-205ENST00000467663 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
CTNS-205ENST00000467663 TMEM94Q12767 1356 aa17.9■□□□□ 0.46
CTNS-205ENST00000467663 TRIM52Q96A61 297 aa17.89■□□□□ 0.45
CTNS-205ENST00000467663 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 PROSER2Q86WR7 435 aaPredicted RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
CTNS-205ENST00000467663 ADAMTS13Q76LX8 1427 aa17.88■□□□□ 0.45
CTNS-205ENST00000467663 DISP3Q9P2K9 1392 aa17.87■□□□□ 0.45
CTNS-205ENST00000467663 TRPM2O94759 1503 aa17.87■□□□□ 0.45
CTNS-205ENST00000467663 HRCP23327 699 aa17.85■□□□□ 0.45
CTNS-205ENST00000467663 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
CTNS-205ENST00000467663 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
CTNS-205ENST00000467663 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
CTNS-205ENST00000467663 PIK3R4Q99570 1358 aa17.84■□□□□ 0.45
CTNS-205ENST00000467663 ZNF326Q5BKZ1 582 aaKnown RBP17.83■□□□□ 0.44
CTNS-205ENST00000467663 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
CTNS-205ENST00000467663 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.44
CTNS-205ENST00000467663 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
CTNS-205ENST00000467663 NCOA3Q9Y6Q9 1424 aa17.8■□□□□ 0.44
CTNS-205ENST00000467663 SETBP1Q9Y6X0 1596 aa17.79■□□□□ 0.44
CTNS-205ENST00000467663 SETD5Q9C0A6 1442 aa17.79■□□□□ 0.44
CTNS-205ENST00000467663 MSH6P52701 1360 aa17.79■□□□□ 0.44
CTNS-205ENST00000467663 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.44
CTNS-205ENST00000467663 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.44
CTNS-205ENST00000467663 AMOTL2Q9Y2J4 779 aa17.77■□□□□ 0.44
CTNS-205ENST00000467663 PTPRUQ92729 1446 aa17.77■□□□□ 0.44
CTNS-205ENST00000467663 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
CTNS-205ENST00000467663 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
CTNS-205ENST00000467663 KIF1BO60333 1816 aa17.75■□□□□ 0.43
CTNS-205ENST00000467663 FOXD1Q16676 465 aa17.75■□□□□ 0.43
CTNS-205ENST00000467663 ILDR2Q71H61 639 aa17.75■□□□□ 0.43
CTNS-205ENST00000467663 VGFO15240 615 aaPredicted RBP17.73■□□□□ 0.43
CTNS-205ENST00000467663 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
CTNS-205ENST00000467663 METP08581 1390 aa17.73■□□□□ 0.43
CTNS-205ENST00000467663 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
CTNS-205ENST00000467663 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
CTNS-205ENST00000467663 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
CTNS-205ENST00000467663 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
CTNS-205ENST00000467663 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
CTNS-205ENST00000467663 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
CTNS-205ENST00000467663 ROBO1Q9Y6N7 1651 aa17.69■□□□□ 0.42
CTNS-205ENST00000467663 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
CTNS-205ENST00000467663 SPATA31E1Q6ZUB1 1445 aa17.66■□□□□ 0.42
CTNS-205ENST00000467663 ATF3P18847 181 aa17.66■□□□□ 0.42
CTNS-205ENST00000467663 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.66■□□□□ 0.42
CTNS-205ENST00000467663 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
CTNS-205ENST00000467663 DCCP43146 1447 aa17.65■□□□□ 0.42
CTNS-205ENST00000467663 PPLO60437 1756 aa17.64■□□□□ 0.41
CTNS-205ENST00000467663 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
CTNS-205ENST00000467663 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
CTNS-205ENST00000467663 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
CTNS-205ENST00000467663 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
CTNS-205ENST00000467663 PRAG1Q86YV5 1406 aa17.62■□□□□ 0.41
CTNS-205ENST00000467663 SOCS7O14512 581 aa17.61■□□□□ 0.41
CTNS-205ENST00000467663 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
CTNS-205ENST00000467663 PTCH1Q13635 1447 aa17.61■□□□□ 0.41
CTNS-205ENST00000467663 CCER1Q8TC90 406 aaPredicted RBP17.6■□□□□ 0.41
CTNS-205ENST00000467663 ADGRL3Q9HAR2 1447 aa17.6■□□□□ 0.41
CTNS-205ENST00000467663 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
CTNS-205ENST00000467663 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
CTNS-205ENST00000467663 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
CTNS-205ENST00000467663 PHLPP1O60346 1717 aa17.58■□□□□ 0.4
CTNS-205ENST00000467663 MST1RQ04912 1400 aa17.57■□□□□ 0.4
CTNS-205ENST00000467663 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
CTNS-205ENST00000467663 JCADQ9P266 1359 aa17.56■□□□□ 0.4
CTNS-205ENST00000467663 AHDC1Q5TGY3 1603 aaPredicted RBP17.56■□□□□ 0.4
CTNS-205ENST00000467663 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
CTNS-205ENST00000467663 COL16A1Q07092 1604 aaPredicted RBP17.55■□□□□ 0.4
CTNS-205ENST00000467663 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
CTNS-205ENST00000467663 NALCNQ8IZF0 1738 aa17.53■□□□□ 0.4
CTNS-205ENST00000467663 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
CTNS-205ENST00000467663 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
CTNS-205ENST00000467663 TECPR2O15040 1411 aa17.52■□□□□ 0.4
CTNS-205ENST00000467663 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
CTNS-205ENST00000467663 NRXN1Q9ULB1 1477 aa17.51■□□□□ 0.39
CTNS-205ENST00000467663 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
CTNS-205ENST00000467663 MYOM2P54296 1465 aa17.5■□□□□ 0.39
CTNS-205ENST00000467663 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
CTNS-205ENST00000467663 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
CTNS-205ENST00000467663 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
CTNS-205ENST00000467663 C1orf167Q5SNV9 1468 aa17.49■□□□□ 0.39
CTNS-205ENST00000467663 STK26Q9P289 416 aa17.48■□□□□ 0.39
CTNS-205ENST00000467663 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
CTNS-205ENST00000467663 SIRT1Q96EB6 747 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms