RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 ZNF335Q9H4Z2 1342 aaPredicted RBP38.53■■■■□ 3.76
PDCD4-205ENST00000467574 NEXMIFQ5QGS0 1516 aa38.48■■■■□ 3.75
PDCD4-205ENST00000467574 STRCP1A6NGW2 1772 aa38.48■■■■□ 3.75
PDCD4-205ENST00000467574 CCDC144AA2RUR9 1427 aa38.46■■■■□ 3.75
PDCD4-205ENST00000467574 PLEKHG1Q9ULL1 1385 aa38.45■■■■□ 3.75
PDCD4-205ENST00000467574 TRIM26Q12899 539 aaPredicted RBP38.44■■■■□ 3.74
PDCD4-205ENST00000467574 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.41■■■■□ 3.74
PDCD4-205ENST00000467574 CERKQ8TCT0 537 aa38.4■■■■□ 3.74
PDCD4-205ENST00000467574 PPLO60437 1756 aa38.39■■■■□ 3.74
PDCD4-205ENST00000467574 SPATA31E1Q6ZUB1 1445 aa38.39■■■■□ 3.74
PDCD4-205ENST00000467574 HDGFP51858 240 aaKnown RBP38.39■■■■□ 3.74
PDCD4-205ENST00000467574 NUTM2DQ5VT03 806 aaPredicted RBP38.38■■■■□ 3.73
PDCD4-205ENST00000467574 NRXN3Q9Y4C0 1643 aa38.38■■■■□ 3.73
PDCD4-205ENST00000467574 ANKRD30BQ9BXX2 1392 aa38.37■■■■□ 3.73
PDCD4-205ENST00000467574 PPP1R15AO75807 674 aaPredicted RBP38.37■■■■□ 3.73
PDCD4-205ENST00000467574 CPS1P31327 1500 aa38.37■■■■□ 3.73
PDCD4-205ENST00000467574 ZNF326Q5BKZ1 582 aaKnown RBP38.36■■■■□ 3.73
PDCD4-205ENST00000467574 ADAMTS13Q76LX8 1427 aa38.34■■■■□ 3.73
PDCD4-205ENST00000467574 IFT172Q9UG01 1749 aa38.34■■■■□ 3.73
PDCD4-205ENST00000467574 SETBP1Q9Y6X0 1596 aa38.33■■■■□ 3.73
PDCD4-205ENST00000467574 DIP2AQ14689 1571 aa38.32■■■■□ 3.73
PDCD4-205ENST00000467574 IQSEC2Q5JU85 1478 aa38.31■■■■□ 3.72
PDCD4-205ENST00000467574 SLC26A8Q96RN1 970 aa38.31■■■■□ 3.72
PDCD4-205ENST00000467574 NWD1Q149M9 1564 aa38.29■■■■□ 3.72
PDCD4-205ENST00000467574 SENP3Q9H4L4 574 aaPredicted RBP38.28■■■■□ 3.72
PDCD4-205ENST00000467574 CHD2O14647 1828 aaKnown RBP38.27■■■■□ 3.72
PDCD4-205ENST00000467574 RPGRIP1LQ68CZ1 1315 aa38.25■■■■□ 3.71
PDCD4-205ENST00000467574 BCANQ96GW7 911 aa38.23■■■■□ 3.71
PDCD4-205ENST00000467574 LRRC7Q96NW7 1537 aa38.21■■■■□ 3.71
PDCD4-205ENST00000467574 SETD1AO15047 1707 aaKnown RBP38.21■■■■□ 3.71
PDCD4-205ENST00000467574 XIRP1Q702N8 1843 aaKnown RBP38.2■■■■□ 3.71
PDCD4-205ENST00000467574 TBX22Q9Y458 520 aa38.2■■■■□ 3.71
PDCD4-205ENST00000467574 RGL3Q3MIN7 710 aa38.16■■■■□ 3.7
PDCD4-205ENST00000467574 NKTRP30414 1462 aaKnown RBP38.15■■■■□ 3.7
PDCD4-205ENST00000467574 KCNA6P17658 529 aa38.14■■■■□ 3.7
PDCD4-205ENST00000467574 FBXO41Q8TF61 875 aa38.14■■■■□ 3.7
PDCD4-205ENST00000467574 VGFO15240 615 aaPredicted RBP38.13■■■■□ 3.69
PDCD4-205ENST00000467574 PIK3R4Q99570 1358 aa38.12■■■■□ 3.69
PDCD4-205ENST00000467574 XRN1Q8IZH2 1706 aaKnown RBP38.1■■■■□ 3.69
PDCD4-205ENST00000467574 PTPRUQ92729 1446 aa38.09■■■■□ 3.69
PDCD4-205ENST00000467574 ALKQ9UM73 1620 aa38.09■■■■□ 3.69
PDCD4-205ENST00000467574 ILDR1Q86SU0 546 aaPredicted RBP38.08■■■■□ 3.69
PDCD4-205ENST00000467574 ADGRF5Q8IZF2 1346 aa38.07■■■■□ 3.68
PDCD4-205ENST00000467574 DHX57Q6P158 1386 aaKnown RBP38.06■■■■□ 3.68
PDCD4-205ENST00000467574 MYOM2P54296 1465 aa38.06■■■■□ 3.68
PDCD4-205ENST00000467574 METP08581 1390 aa38.06■■■■□ 3.68
PDCD4-205ENST00000467574 NRXN1Q9ULB1 1477 aa38.04■■■■□ 3.68
PDCD4-205ENST00000467574 PIK3C2GO75747 1445 aa38.03■■■■□ 3.68
PDCD4-205ENST00000467574 TMEM94Q12767 1356 aa37.99■■■■□ 3.67
PDCD4-205ENST00000467574 ASXL1Q8IXJ9 1541 aa37.95■■■■□ 3.67
PDCD4-205ENST00000467574 PROSER2Q86WR7 435 aaPredicted RBP37.93■■■■□ 3.66
PDCD4-205ENST00000467574 AMOTL2Q9Y2J4 779 aa37.93■■■■□ 3.66
PDCD4-205ENST00000467574 LAMC1P11047 1609 aa37.91■■■■□ 3.66
PDCD4-205ENST00000467574 PRAG1Q86YV5 1406 aa37.9■■■■□ 3.66
PDCD4-205ENST00000467574 RBM33Q96EV2 1170 aaKnown RBP37.9■■■■□ 3.66
PDCD4-205ENST00000467574 UBAP1LF5GYI3 381 aa37.89■■■■□ 3.66
PDCD4-205ENST00000467574 PCGF6Q9BYE7 350 aa37.85■■■■□ 3.65
PDCD4-205ENST00000467574 NCOA3Q9Y6Q9 1424 aa37.85■■■■□ 3.65
PDCD4-205ENST00000467574 PTCH1Q13635 1447 aa37.83■■■■□ 3.65
PDCD4-205ENST00000467574 KNDC1Q76NI1 1749 aa37.82■■■■□ 3.65
PDCD4-205ENST00000467574 DCAF11Q8TEB1 546 aa37.82■■■■□ 3.64
PDCD4-205ENST00000467574 SIN3AQ96ST3 1273 aa37.8■■■■□ 3.64
PDCD4-205ENST00000467574 C14orf93Q9H972 538 aaKnown RBP37.79■■■■□ 3.64
PDCD4-205ENST00000467574 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.78■■■■□ 3.64
PDCD4-205ENST00000467574 TOM1O60784 492 aa37.78■■■■□ 3.64
PDCD4-205ENST00000467574 STAC3Q96MF2 364 aa37.77■■■■□ 3.64
PDCD4-205ENST00000467574 NALCNQ8IZF0 1738 aa37.76■■■■□ 3.64
PDCD4-205ENST00000467574 KDM2AQ9Y2K7 1162 aa37.76■■■■□ 3.64
PDCD4-205ENST00000467574 ROBO2Q9HCK4 1378 aa37.76■■■■□ 3.64
PDCD4-205ENST00000467574 TECPR2O15040 1411 aa37.76■■■■□ 3.63
PDCD4-205ENST00000467574 MSH6P52701 1360 aa37.75■■■■□ 3.63
PDCD4-205ENST00000467574 ADGRB1O14514 1584 aa37.75■■■■□ 3.63
PDCD4-205ENST00000467574 CFAP70Q5T0N1 1121 aa37.74■■■■□ 3.63
PDCD4-205ENST00000467574 LRPPRCP42704 1394 aaKnown RBP37.73■■■■□ 3.63
PDCD4-205ENST00000467574 TMEM132EQ6IEE7 984 aa37.71■■■■□ 3.63
PDCD4-205ENST00000467574 YTHDC2Q9H6S0 1430 aaKnown RBP37.7■■■■□ 3.63
PDCD4-205ENST00000467574 KIAA1210Q9ULL0 1709 aa37.68■■■■□ 3.62
PDCD4-205ENST00000467574 ADGRL3Q9HAR2 1447 aa37.68■■■■□ 3.62
PDCD4-205ENST00000467574 ABCC11Q96J66 1382 aa37.68■■■■□ 3.62
PDCD4-205ENST00000467574 PIP4K2BP78356 416 aa37.66■■■■□ 3.62
PDCD4-205ENST00000467574 DCCP43146 1447 aa37.65■■■■□ 3.62
PDCD4-205ENST00000467574 NEUROD1Q13562 356 aa37.65■■■■□ 3.62
PDCD4-205ENST00000467574 L3MBTL2Q969R5 705 aa37.64■■■■□ 3.62
PDCD4-205ENST00000467574 C14orf37Q86TY3 774 aa37.63■■■■□ 3.61
PDCD4-205ENST00000467574 C19orf44Q9H6X5 657 aa37.63■■■■□ 3.61
PDCD4-205ENST00000467574 STK26Q9P289 416 aa37.61■■■■□ 3.61
PDCD4-205ENST00000467574 SCAF1Q9H7N4 1312 aaKnown RBP37.61■■■■□ 3.61
PDCD4-205ENST00000467574 ROBO1Q9Y6N7 1651 aa37.6■■■■□ 3.61
PDCD4-205ENST00000467574 DLC1Q96QB1 1528 aa37.58■■■■□ 3.61
PDCD4-205ENST00000467574 FAM135BQ49AJ0 1406 aa37.56■■■■□ 3.6
PDCD4-205ENST00000467574 PLEKHH1Q9ULM0 1364 aa37.55■■■■□ 3.6
PDCD4-205ENST00000467574 CADPS2Q86UW7 1296 aa37.54■■■■□ 3.6
PDCD4-205ENST00000467574 CDC42BPGQ6DT37 1551 aa37.51■■■■□ 3.6
PDCD4-205ENST00000467574 TRPM1Q7Z4N2 1603 aa37.51■■■■□ 3.6
PDCD4-205ENST00000467574 ARHGEF28Q8N1W1 1705 aaKnown RBP37.51■■■■□ 3.6
PDCD4-205ENST00000467574 ATF3P18847 181 aa37.51■■■■□ 3.6
PDCD4-205ENST00000467574 WAPLQ7Z5K2 1190 aa37.51■■■■□ 3.6
PDCD4-205ENST00000467574 SLAIN2Q9P270 581 aa37.51■■■■□ 3.6
PDCD4-205ENST00000467574 MST1RQ04912 1400 aa37.51■■■■□ 3.59
PDCD4-205ENST00000467574 SIRT1Q96EB6 747 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms