RNA–Protein interactions for RNA: ENST00000466089.5

LINC00879-203, long intergenic non-protein coding RNA 879, humanhuman

TSL 3

Gene LINC00879, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-203ENST00000466089 FAM50AQ14320 339 aaKnown RBP18.5■□□□□ 0.55
LINC00879-203ENST00000466089 NWD1Q149M9 1564 aa18.5■□□□□ 0.55
LINC00879-203ENST00000466089 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
LINC00879-203ENST00000466089 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
LINC00879-203ENST00000466089 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
LINC00879-203ENST00000466089 MSH6P52701 1360 aa18.47■□□□□ 0.55
LINC00879-203ENST00000466089 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
LINC00879-203ENST00000466089 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
LINC00879-203ENST00000466089 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
LINC00879-203ENST00000466089 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
LINC00879-203ENST00000466089 POTEAQ6S8J7 498 aa18.42■□□□□ 0.54
LINC00879-203ENST00000466089 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
LINC00879-203ENST00000466089 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
LINC00879-203ENST00000466089 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
LINC00879-203ENST00000466089 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
LINC00879-203ENST00000466089 TMEM131LA2VDJ0 1609 aa18.39■□□□□ 0.53
LINC00879-203ENST00000466089 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.53
LINC00879-203ENST00000466089 JCADQ9P266 1359 aa18.38■□□□□ 0.53
LINC00879-203ENST00000466089 UNC13BO14795 1591 aa18.38■□□□□ 0.53
LINC00879-203ENST00000466089 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
LINC00879-203ENST00000466089 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
LINC00879-203ENST00000466089 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC00879-203ENST00000466089 CHD2O14647 1828 aaKnown RBP18.36■□□□□ 0.53
LINC00879-203ENST00000466089 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
LINC00879-203ENST00000466089 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
LINC00879-203ENST00000466089 ADAMTS13Q76LX8 1427 aa18.34■□□□□ 0.53
LINC00879-203ENST00000466089 NCOA3Q9Y6Q9 1424 aa18.33■□□□□ 0.53
LINC00879-203ENST00000466089 E9PCH4 1651 aa18.32■□□□□ 0.52
LINC00879-203ENST00000466089 COL16A1Q07092 1604 aaPredicted RBP18.32■□□□□ 0.52
LINC00879-203ENST00000466089 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
LINC00879-203ENST00000466089 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
LINC00879-203ENST00000466089 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
LINC00879-203ENST00000466089 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
LINC00879-203ENST00000466089 IQGAP3Q86VI3 1631 aa18.3■□□□□ 0.52
LINC00879-203ENST00000466089 ATF3P18847 181 aa18.29■□□□□ 0.52
LINC00879-203ENST00000466089 NUP155O75694 1391 aa18.29■□□□□ 0.52
LINC00879-203ENST00000466089 LRP6O75581 1613 aa18.28■□□□□ 0.52
LINC00879-203ENST00000466089 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
LINC00879-203ENST00000466089 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
LINC00879-203ENST00000466089 SETD1AO15047 1707 aaKnown RBP18.28■□□□□ 0.52
LINC00879-203ENST00000466089 TRPM2O94759 1503 aa18.28■□□□□ 0.52
LINC00879-203ENST00000466089 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
LINC00879-203ENST00000466089 AHDC1Q5TGY3 1603 aaPredicted RBP18.27■□□□□ 0.51
LINC00879-203ENST00000466089 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
LINC00879-203ENST00000466089 ITGAEP38570 1179 aa18.25■□□□□ 0.51
LINC00879-203ENST00000466089 AMOTL2Q9Y2J4 779 aa18.25■□□□□ 0.51
LINC00879-203ENST00000466089 PTPRUQ92729 1446 aa18.24■□□□□ 0.51
LINC00879-203ENST00000466089 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
LINC00879-203ENST00000466089 BRINP3Q76B58 766 aa18.21■□□□□ 0.51
LINC00879-203ENST00000466089 DCCP43146 1447 aa18.21■□□□□ 0.51
LINC00879-203ENST00000466089 SHPRHQ149N8 1683 aa18.21■□□□□ 0.51
LINC00879-203ENST00000466089 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
LINC00879-203ENST00000466089 TRIM52Q96A61 297 aa18.19■□□□□ 0.5
LINC00879-203ENST00000466089 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
LINC00879-203ENST00000466089 NRXN3Q9Y4C0 1643 aa18.19■□□□□ 0.5
LINC00879-203ENST00000466089 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
LINC00879-203ENST00000466089 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
LINC00879-203ENST00000466089 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00879-203ENST00000466089 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00879-203ENST00000466089 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
LINC00879-203ENST00000466089 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
LINC00879-203ENST00000466089 METP08581 1390 aa18.16■□□□□ 0.5
LINC00879-203ENST00000466089 MST1RQ04912 1400 aa18.15■□□□□ 0.5
LINC00879-203ENST00000466089 RXRBP28702 533 aa18.13■□□□□ 0.49
LINC00879-203ENST00000466089 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
LINC00879-203ENST00000466089 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
LINC00879-203ENST00000466089 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
LINC00879-203ENST00000466089 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
LINC00879-203ENST00000466089 AFF2P51816 1311 aa18.11■□□□□ 0.49
LINC00879-203ENST00000466089 CLTCL1P53675 1640 aa18.1■□□□□ 0.49
LINC00879-203ENST00000466089 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
LINC00879-203ENST00000466089 NEXMIFQ5QGS0 1516 aa18.1■□□□□ 0.49
LINC00879-203ENST00000466089 DDX17Q92841 729 aaKnown RBP18.09■□□□□ 0.49
LINC00879-203ENST00000466089 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
LINC00879-203ENST00000466089 CDK12Q9NYV4 1490 aaPredicted RBP18.08■□□□□ 0.49
LINC00879-203ENST00000466089 PNPLA6Q8IY17 1366 aa18.07■□□□□ 0.48
LINC00879-203ENST00000466089 C8orf37Q96NL8 207 aa18.07■□□□□ 0.48
LINC00879-203ENST00000466089 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
LINC00879-203ENST00000466089 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
LINC00879-203ENST00000466089 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
LINC00879-203ENST00000466089 RGS12O14924 1447 aa18.02■□□□□ 0.48
LINC00879-203ENST00000466089 NAIPQ13075 1403 aa18.02■□□□□ 0.48
LINC00879-203ENST00000466089 ROBO2Q9HCK4 1378 aa18.02■□□□□ 0.47
LINC00879-203ENST00000466089 KIF1BO60333 1816 aa18.01■□□□□ 0.47
LINC00879-203ENST00000466089 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
LINC00879-203ENST00000466089 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
LINC00879-203ENST00000466089 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
LINC00879-203ENST00000466089 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
LINC00879-203ENST00000466089 QTRT2Q9H974 415 aaKnown RBP18■□□□□ 0.47
LINC00879-203ENST00000466089 NGLY1Q96IV0 654 aa17.99■□□□□ 0.47
LINC00879-203ENST00000466089 ORAI2Q96SN7 254 aa17.97■□□□□ 0.47
LINC00879-203ENST00000466089 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
LINC00879-203ENST00000466089 SOS2Q07890 1332 aaPredicted RBP17.97■□□□□ 0.47
LINC00879-203ENST00000466089 LAMC1P11047 1609 aa17.96■□□□□ 0.47
LINC00879-203ENST00000466089 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
LINC00879-203ENST00000466089 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
LINC00879-203ENST00000466089 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
LINC00879-203ENST00000466089 USP21Q9UK80 565 aa17.93■□□□□ 0.46
LINC00879-203ENST00000466089 TRPC5Q9UL62 973 aaPredicted RBP17.9■□□□□ 0.46
LINC00879-203ENST00000466089 ATAD2Q6PL18 1390 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms