RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 TRPM2O94759 1503 aa28.11■■■□□ 2.09
CHKB-204ENST00000465842 ACIN1Q9UKV3 1341 aaKnown RBP28.11■■■□□ 2.09
CHKB-204ENST00000465842 SENP3Q9H4L4 574 aaPredicted RBP28.1■■■□□ 2.09
CHKB-204ENST00000465842 ZFYVE9O95405 1425 aa28.09■■■□□ 2.09
CHKB-204ENST00000465842 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.09■■■□□ 2.09
CHKB-204ENST00000465842 ZNF326Q5BKZ1 582 aaKnown RBP28.07■■■□□ 2.08
CHKB-204ENST00000465842 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
CHKB-204ENST00000465842 NUTM2DQ5VT03 806 aaPredicted RBP28.06■■■□□ 2.08
CHKB-204ENST00000465842 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
CHKB-204ENST00000465842 MPHOSPH9Q99550 1183 aa28.06■■■□□ 2.08
CHKB-204ENST00000465842 RAB3GAP2Q9H2M9 1393 aa28.06■■■□□ 2.08
CHKB-204ENST00000465842 FOXD1Q16676 465 aa28.05■■■□□ 2.08
CHKB-204ENST00000465842 PLEKHG1Q9ULL1 1385 aa28.03■■■□□ 2.08
CHKB-204ENST00000465842 UBAP1LF5GYI3 381 aa27.99■■■□□ 2.07
CHKB-204ENST00000465842 KIF1BO60333 1816 aa27.99■■■□□ 2.07
CHKB-204ENST00000465842 STRCP1A6NGW2 1772 aa27.98■■■□□ 2.07
CHKB-204ENST00000465842 CCDC144AA2RUR9 1427 aa27.94■■■□□ 2.06
CHKB-204ENST00000465842 LRRC7Q96NW7 1537 aa27.94■■■□□ 2.06
CHKB-204ENST00000465842 KCNA6P17658 529 aa27.93■■■□□ 2.06
CHKB-204ENST00000465842 TBX22Q9Y458 520 aa27.9■■■□□ 2.06
CHKB-204ENST00000465842 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
CHKB-204ENST00000465842 TOM1O60784 492 aa27.88■■■□□ 2.05
CHKB-204ENST00000465842 DIP2AQ14689 1571 aa27.88■■■□□ 2.05
CHKB-204ENST00000465842 SCAF1Q9H7N4 1312 aaKnown RBP27.88■■■□□ 2.05
CHKB-204ENST00000465842 ADAMTS13Q76LX8 1427 aa27.87■■■□□ 2.05
CHKB-204ENST00000465842 PROSER2Q86WR7 435 aaPredicted RBP27.86■■■□□ 2.05
CHKB-204ENST00000465842 HRCP23327 699 aa27.85■■■□□ 2.05
CHKB-204ENST00000465842 NWD1Q149M9 1564 aa27.85■■■□□ 2.05
CHKB-204ENST00000465842 PIP4K2BP78356 416 aa27.84■■■□□ 2.05
CHKB-204ENST00000465842 RPGRIP1LQ68CZ1 1315 aa27.84■■■□□ 2.05
CHKB-204ENST00000465842 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.05
CHKB-204ENST00000465842 VGFO15240 615 aaPredicted RBP27.82■■■□□ 2.04
CHKB-204ENST00000465842 TMEM94Q12767 1356 aa27.82■■■□□ 2.04
CHKB-204ENST00000465842 SETBP1Q9Y6X0 1596 aa27.82■■■□□ 2.04
CHKB-204ENST00000465842 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
CHKB-204ENST00000465842 CHD2O14647 1828 aaKnown RBP27.79■■■□□ 2.04
CHKB-204ENST00000465842 PIK3R4Q99570 1358 aa27.79■■■□□ 2.04
CHKB-204ENST00000465842 RBM33Q96EV2 1170 aaKnown RBP27.79■■■□□ 2.04
CHKB-204ENST00000465842 NRXN3Q9Y4C0 1643 aa27.78■■■□□ 2.04
CHKB-204ENST00000465842 SPATA31E1Q6ZUB1 1445 aa27.75■■■□□ 2.03
CHKB-204ENST00000465842 XIRP1Q702N8 1843 aaKnown RBP27.75■■■□□ 2.03
CHKB-204ENST00000465842 PPLO60437 1756 aa27.75■■■□□ 2.03
CHKB-204ENST00000465842 AMOTL2Q9Y2J4 779 aa27.74■■■□□ 2.03
CHKB-204ENST00000465842 C14orf37Q86TY3 774 aa27.73■■■□□ 2.03
CHKB-204ENST00000465842 METP08581 1390 aa27.71■■■□□ 2.03
CHKB-204ENST00000465842 PTPRUQ92729 1446 aa27.7■■■□□ 2.03
CHKB-204ENST00000465842 MSH6P52701 1360 aa27.7■■■□□ 2.02
CHKB-204ENST00000465842 ANKRD30BQ9BXX2 1392 aa27.7■■■□□ 2.02
CHKB-204ENST00000465842 ALKQ9UM73 1620 aa27.68■■■□□ 2.02
CHKB-204ENST00000465842 ADGRF5Q8IZF2 1346 aa27.66■■■□□ 2.02
CHKB-204ENST00000465842 XRN1Q8IZH2 1706 aaKnown RBP27.64■■■□□ 2.02
CHKB-204ENST00000465842 IFT172Q9UG01 1749 aa27.64■■■□□ 2.01
CHKB-204ENST00000465842 NCOA3Q9Y6Q9 1424 aa27.63■■■□□ 2.01
CHKB-204ENST00000465842 HSPA1LP34931 641 aa27.61■■■□□ 2.01
CHKB-204ENST00000465842 SETD1AO15047 1707 aaKnown RBP27.59■■■□□ 2.01
CHKB-204ENST00000465842 TRIM26Q12899 539 aaPredicted RBP27.59■■■□□ 2.01
CHKB-204ENST00000465842 C19orf44Q9H6X5 657 aa27.57■■■□□ 2
CHKB-204ENST00000465842 ATF3P18847 181 aa27.56■■■□□ 2
CHKB-204ENST00000465842 PIK3C2GO75747 1445 aa27.55■■■□□ 2
CHKB-204ENST00000465842 MYOM2P54296 1465 aa27.54■■■□□ 2
CHKB-204ENST00000465842 CADPS2Q86UW7 1296 aa27.54■■■□□ 2
CHKB-204ENST00000465842 SLAIN2Q9P270 581 aa27.53■■■□□ 2
CHKB-204ENST00000465842 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.52■■■□□ 2
CHKB-204ENST00000465842 PTCH1Q13635 1447 aa27.51■■□□□ 1.99
CHKB-204ENST00000465842 FAM135BQ49AJ0 1406 aa27.51■■□□□ 1.99
CHKB-204ENST00000465842 KDM2AQ9Y2K7 1162 aa27.51■■□□□ 1.99
CHKB-204ENST00000465842 DCAF11Q8TEB1 546 aa27.5■■□□□ 1.99
CHKB-204ENST00000465842 STK26Q9P289 416 aa27.5■■□□□ 1.99
CHKB-204ENST00000465842 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
CHKB-204ENST00000465842 ROBO2Q9HCK4 1378 aa27.48■■□□□ 1.99
CHKB-204ENST00000465842 TMEM132EQ6IEE7 984 aa27.48■■□□□ 1.99
CHKB-204ENST00000465842 NRXN1Q9ULB1 1477 aa27.48■■□□□ 1.99
CHKB-204ENST00000465842 ADGRL3Q9HAR2 1447 aa27.47■■□□□ 1.99
CHKB-204ENST00000465842 DCCP43146 1447 aa27.46■■□□□ 1.99
CHKB-204ENST00000465842 LAMC1P11047 1609 aa27.45■■□□□ 1.99
CHKB-204ENST00000465842 CFAP70Q5T0N1 1121 aa27.45■■□□□ 1.98
CHKB-204ENST00000465842 C14orf93Q9H972 538 aaKnown RBP27.45■■□□□ 1.98
CHKB-204ENST00000465842 LRPPRCP42704 1394 aaKnown RBP27.45■■□□□ 1.98
CHKB-204ENST00000465842 PRAG1Q86YV5 1406 aa27.44■■□□□ 1.98
CHKB-204ENST00000465842 ASXL1Q8IXJ9 1541 aa27.44■■□□□ 1.98
CHKB-204ENST00000465842 NALCNQ8IZF0 1738 aa27.42■■□□□ 1.98
CHKB-204ENST00000465842 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
CHKB-204ENST00000465842 DHX57Q6P158 1386 aaKnown RBP27.41■■□□□ 1.98
CHKB-204ENST00000465842 YTHDC2Q9H6S0 1430 aaKnown RBP27.41■■□□□ 1.98
CHKB-204ENST00000465842 ABCC11Q96J66 1382 aa27.38■■□□□ 1.97
CHKB-204ENST00000465842 DISP3Q9P2K9 1392 aa27.38■■□□□ 1.97
CHKB-204ENST00000465842 TECPR2O15040 1411 aa27.38■■□□□ 1.97
CHKB-204ENST00000465842 KNDC1Q76NI1 1749 aa27.37■■□□□ 1.97
CHKB-204ENST00000465842 WAPLQ7Z5K2 1190 aa27.36■■□□□ 1.97
CHKB-204ENST00000465842 MST1RQ04912 1400 aa27.35■■□□□ 1.97
CHKB-204ENST00000465842 PHLPP1O60346 1717 aa27.33■■□□□ 1.97
CHKB-204ENST00000465842 NEUROD1Q13562 356 aa27.33■■□□□ 1.97
CHKB-204ENST00000465842 BRINP3Q76B58 766 aa27.32■■□□□ 1.96
CHKB-204ENST00000465842 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
CHKB-204ENST00000465842 PLEKHH1Q9ULM0 1364 aa27.31■■□□□ 1.96
CHKB-204ENST00000465842 POGKQ9P215 609 aa27.28■■□□□ 1.96
CHKB-204ENST00000465842 ADGRB1O14514 1584 aa27.27■■□□□ 1.96
CHKB-204ENST00000465842 MED1Q15648 1581 aaPredicted RBP27.27■■□□□ 1.96
CHKB-204ENST00000465842 CDC42BPGQ6DT37 1551 aa27.27■■□□□ 1.96
CHKB-204ENST00000465842 C1orf167Q5SNV9 1468 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms