RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 BCANQ96GW7 911 aa17.48■□□□□ 0.39
CSMD2-207ENST00000465819 CHD2O14647 1828 aaKnown RBP17.48■□□□□ 0.39
CSMD2-207ENST00000465819 JCADQ9P266 1359 aa17.48■□□□□ 0.39
CSMD2-207ENST00000465819 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
CSMD2-207ENST00000465819 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
CSMD2-207ENST00000465819 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
CSMD2-207ENST00000465819 SLAIN2Q9P270 581 aa17.46■□□□□ 0.39
CSMD2-207ENST00000465819 COL16A1Q07092 1604 aaPredicted RBP17.46■□□□□ 0.39
CSMD2-207ENST00000465819 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
CSMD2-207ENST00000465819 GCC2Q8IWJ2 1684 aa17.45■□□□□ 0.38
CSMD2-207ENST00000465819 RPRD2Q5VT52 1461 aaKnown RBP17.44■□□□□ 0.38
CSMD2-207ENST00000465819 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
CSMD2-207ENST00000465819 APLP2Q06481 763 aa17.42■□□□□ 0.38
CSMD2-207ENST00000465819 ADGRL2O95490 1459 aa17.42■□□□□ 0.38
CSMD2-207ENST00000465819 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
CSMD2-207ENST00000465819 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
CSMD2-207ENST00000465819 LRP6O75581 1613 aa17.4■□□□□ 0.38
CSMD2-207ENST00000465819 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
CSMD2-207ENST00000465819 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.38
CSMD2-207ENST00000465819 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
CSMD2-207ENST00000465819 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
CSMD2-207ENST00000465819 AHDC1Q5TGY3 1603 aaPredicted RBP17.38■□□□□ 0.37
CSMD2-207ENST00000465819 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
CSMD2-207ENST00000465819 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
CSMD2-207ENST00000465819 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
CSMD2-207ENST00000465819 C14orf37Q86TY3 774 aa17.37■□□□□ 0.37
CSMD2-207ENST00000465819 TBX22Q9Y458 520 aa17.37■□□□□ 0.37
CSMD2-207ENST00000465819 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
CSMD2-207ENST00000465819 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
CSMD2-207ENST00000465819 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
CSMD2-207ENST00000465819 ADAMTS13Q76LX8 1427 aa17.35■□□□□ 0.37
CSMD2-207ENST00000465819 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
CSMD2-207ENST00000465819 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
CSMD2-207ENST00000465819 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSMD2-207ENST00000465819 TRIM52Q96A61 297 aa17.33■□□□□ 0.36
CSMD2-207ENST00000465819 UNC13BO14795 1591 aa17.32■□□□□ 0.36
CSMD2-207ENST00000465819 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
CSMD2-207ENST00000465819 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
CSMD2-207ENST00000465819 ATF3P18847 181 aa17.32■□□□□ 0.36
CSMD2-207ENST00000465819 C19orf44Q9H6X5 657 aa17.32■□□□□ 0.36
CSMD2-207ENST00000465819 E9PCH4 1651 aa17.32■□□□□ 0.36
CSMD2-207ENST00000465819 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
CSMD2-207ENST00000465819 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
CSMD2-207ENST00000465819 TRPM2O94759 1503 aa17.3■□□□□ 0.36
CSMD2-207ENST00000465819 RXRBP28702 533 aa17.27■□□□□ 0.36
CSMD2-207ENST00000465819 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
CSMD2-207ENST00000465819 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
CSMD2-207ENST00000465819 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
CSMD2-207ENST00000465819 DCCP43146 1447 aa17.26■□□□□ 0.35
CSMD2-207ENST00000465819 PTPRUQ92729 1446 aa17.26■□□□□ 0.35
CSMD2-207ENST00000465819 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
CSMD2-207ENST00000465819 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
CSMD2-207ENST00000465819 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
CSMD2-207ENST00000465819 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
CSMD2-207ENST00000465819 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
CSMD2-207ENST00000465819 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
CSMD2-207ENST00000465819 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
CSMD2-207ENST00000465819 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
CSMD2-207ENST00000465819 AFF2P51816 1311 aa17.21■□□□□ 0.35
CSMD2-207ENST00000465819 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
CSMD2-207ENST00000465819 MST1RQ04912 1400 aa17.21■□□□□ 0.34
CSMD2-207ENST00000465819 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
CSMD2-207ENST00000465819 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
CSMD2-207ENST00000465819 RGS12O14924 1447 aa17.17■□□□□ 0.34
CSMD2-207ENST00000465819 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
CSMD2-207ENST00000465819 NUP155O75694 1391 aa17.16■□□□□ 0.34
CSMD2-207ENST00000465819 SPHKAPQ2M3C7 1700 aa17.16■□□□□ 0.34
CSMD2-207ENST00000465819 C8orf37Q96NL8 207 aa17.15■□□□□ 0.34
CSMD2-207ENST00000465819 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
CSMD2-207ENST00000465819 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
CSMD2-207ENST00000465819 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
CSMD2-207ENST00000465819 RBM6P78332 1123 aaKnown RBP17.14■□□□□ 0.33
CSMD2-207ENST00000465819 METP08581 1390 aa17.14■□□□□ 0.33
CSMD2-207ENST00000465819 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
CSMD2-207ENST00000465819 DDX17Q92841 729 aaKnown RBP17.12■□□□□ 0.33
CSMD2-207ENST00000465819 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CSMD2-207ENST00000465819 NEXMIFQ5QGS0 1516 aa17.09■□□□□ 0.33
CSMD2-207ENST00000465819 LAMC1P11047 1609 aa17.09■□□□□ 0.33
CSMD2-207ENST00000465819 PPARGC1BQ86YN6 1023 aaKnown RBP17.08■□□□□ 0.32
CSMD2-207ENST00000465819 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
CSMD2-207ENST00000465819 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
CSMD2-207ENST00000465819 NGLY1Q96IV0 654 aa17.07■□□□□ 0.32
CSMD2-207ENST00000465819 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
CSMD2-207ENST00000465819 ATAD2Q6PL18 1390 aa17.05■□□□□ 0.32
CSMD2-207ENST00000465819 KIF1BO60333 1816 aa17.05■□□□□ 0.32
CSMD2-207ENST00000465819 ITGAEP38570 1179 aa17.04■□□□□ 0.32
CSMD2-207ENST00000465819 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
CSMD2-207ENST00000465819 SOS2Q07890 1332 aaPredicted RBP17.03■□□□□ 0.32
CSMD2-207ENST00000465819 USP21Q9UK80 565 aa17.03■□□□□ 0.32
CSMD2-207ENST00000465819 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
CSMD2-207ENST00000465819 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
CSMD2-207ENST00000465819 ORAI2Q96SN7 254 aa17■□□□□ 0.31
CSMD2-207ENST00000465819 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
CSMD2-207ENST00000465819 ATRNO75882 1429 aa16.99■□□□□ 0.31
CSMD2-207ENST00000465819 FNBP4Q8N3X1 1017 aaPredicted RBP16.99■□□□□ 0.31
CSMD2-207ENST00000465819 PRAG1Q86YV5 1406 aa16.98■□□□□ 0.31
CSMD2-207ENST00000465819 FOXD1Q16676 465 aa16.97■□□□□ 0.31
CSMD2-207ENST00000465819 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.31
CSMD2-207ENST00000465819 HFM1A2PYH4 1435 aa16.96■□□□□ 0.3
CSMD2-207ENST00000465819 MYOM2P54296 1465 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms