RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 WDR78Q5VTH9 848 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 LRCH2Q5VUJ6 765 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 ZKSCAN2Q63HK3 967 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF280DQ6N043 979 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 DNAJC14Q6Y2X3 702 aaPredicted RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 KIAA1211Q6ZU35 1233 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 MTERF4Q7Z6M4 381 aaKnown RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 OTUD6BQ8N6M0 293 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 ATL2Q8NHH9 583 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 RNF217Q8TC41 542 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 DCAF11Q8TEB1 546 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 FBXW7Q969H0 707 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 VTI1AQ96AJ9 217 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 TRERF1Q96PN7 1200 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC94Q9BW85 323 aaPredicted RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 TSPYL1Q9H0U9 437 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 SUDS3Q9H7L9 328 aaPredicted RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 YY1AP1Q9H869 796 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 TOMM22Q9NS69 142 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 GEMIN8Q9NWZ8 242 aaKnown RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 RAI14Q9P0K7 980 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 RBM27Q9P2N5 1060 aaKnown RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 ISY1Q9ULR0 285 aaKnown RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 CEP83Q9Y592 693 aa1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 CTDP1Q9Y5B0 961 aaPredicted RBP1.13□□□□□ -2.23
RPL39P28-201ENST00000465655 CADPSQ9ULU8 1353 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 ANKRD62A6NC57 917 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6L3A6NEY3 463 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6L6A8MZA4 724 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 ESPNB1AK53 854 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 H0YHG0 523 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 RIOK3O14730 519 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 EPB41L2O43491 1005 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 SH3BP5O60239 455 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 NPM3O75607 178 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 WDHD1O75717 1129 aaPredicted RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 CAPN15O75808 1086 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 STK10O94804 968 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 TPM3P06753 285 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 ZNF853P0CG23 659 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 LIG1P18858 919 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PAX3P23760 479 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 MSNP26038 577 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PDE6BP35913 854 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 SARNPP82979 210 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 MYBPC2Q14324 1141 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PPP2R5AQ15172 486 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 SF3A1Q15459 793 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 NFKBIBQ15653 356 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 CT47A1Q5JQC4 288 aaPredicted RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 ZFYVE27Q5T4F4 411 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 GORABQ5T7V8 394 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 KRBA2Q6ZNG9 492 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 DDX46Q7L014 1031 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 HSCBQ8IWL3 235 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 CCDC82Q8N4S0 544 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 MSL3Q8N5Y2 521 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PRPF38AQ8NAV1 312 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 KCNV2Q8TDN2 545 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 EVI5LQ96CN4 794 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 TIGD1Q96MW7 591 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 NOL10Q9BSC4 688 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 MTA3Q9BTC8 594 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 TMX1Q9H3N1 280 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 KDM4CQ9H3R0 1056 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 SMC4Q9NTJ3 1288 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 WDR70Q9NW82 654 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 BIN2Q9UBW5 565 aaPredicted RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 WWC3Q9ULE0 1092 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 SMC3Q9UQE7 1217 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 FRMD4BQ9Y2L6 1034 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 R3HCC1Q9Y3T6 440 aaKnown RBP1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 KIF3AQ9Y496 699 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PPME1Q9Y570 386 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 PRDM2Q13029 1718 aa1.12□□□□□ -2.23
RPL39P28-201ENST00000465655 TESPA1A2RU30 521 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 GOLGA6L22H0YM25 854 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CCP110O43303 1012 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MAP4K4O95819 1239 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 U2AF1L5P0DN76 240 aaPredicted RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 NAT1P18440 290 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 LMNB1P20700 586 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 PAX7P23759 505 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ABCD1P33897 745 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CA8P35219 290 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 ABL2P42684 1182 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 TERF1P54274 439 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 RHBDL3P58872 404 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SRPK2P78362 688 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CCT2P78371 535 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 U2AF1Q01081 240 aaKnown RBP eCLIP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MECOMQ03112 1051 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SLC20A2Q08357 652 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 KIAA2012Q0VF49 1180 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 NEXNQ0ZGT2 675 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 MTA1Q13330 715 aa1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 SF3B2Q13435 895 aaKnown RBP1.11□□□□□ -2.23
RPL39P28-201ENST00000465655 CSPP1Q1MSJ5 1256 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms