RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 SLC24A1O60721 1099 aa1.66□□□□□ -2.14
RPL39P28-201ENST00000465655 MYT1Q01538 1121 aa1.66□□□□□ -2.14
RPL39P28-201ENST00000465655 PELP1Q8IZL8 1130 aaKnown RBP1.65□□□□□ -2.15
RPL39P28-201ENST00000465655 PRKCSHP14314 528 aaPredicted RBP1.61□□□□□ -2.15
RPL39P28-201ENST00000465655 TTBK1Q5TCY1 1321 aaPredicted RBP1.59□□□□□ -2.16
RPL39P28-201ENST00000465655 ERICH6Q7L0X2 663 aa1.58□□□□□ -2.16
RPL39P28-201ENST00000465655 DAXXQ9UER7 740 aaPredicted RBP1.54□□□□□ -2.16
RPL39P28-201ENST00000465655 APLP2Q06481 763 aa1.53□□□□□ -2.16
RPL39P28-201ENST00000465655 EIF5BO60841 1220 aaKnown RBP1.51□□□□□ -2.17
RPL39P28-201ENST00000465655 BCL11AQ9H165 835 aa1.51□□□□□ -2.17
RPL39P28-201ENST00000465655 EHMT2Q96KQ7 1210 aa1.49□□□□□ -2.17
RPL39P28-201ENST00000465655 FAM9AQ8IZU1 332 aaPredicted RBP1.48□□□□□ -2.17
RPL39P28-201ENST00000465655 PLEKHG5O94827 1062 aa1.47□□□□□ -2.17
RPL39P28-201ENST00000465655 PLPPR3Q6T4P5 718 aa1.47□□□□□ -2.17
RPL39P28-201ENST00000465655 RANGAP1P46060 587 aaPredicted RBP1.46□□□□□ -2.18
RPL39P28-201ENST00000465655 NCBP3Q53F19 620 aaKnown RBP1.46□□□□□ -2.18
RPL39P28-201ENST00000465655 CENPBP07199 599 aaPredicted RBP1.44□□□□□ -2.18
RPL39P28-201ENST00000465655 KLHL34Q8N239 644 aa1.44□□□□□ -2.18
RPL39P28-201ENST00000465655 RTN4Q9NQC3 1192 aaKnown RBP1.44□□□□□ -2.18
RPL39P28-201ENST00000465655 PODXL2Q9NZ53 605 aa1.44□□□□□ -2.18
RPL39P28-201ENST00000465655 SCAF1Q9H7N4 1312 aaKnown RBP1.43□□□□□ -2.18
RPL39P28-201ENST00000465655 TIMELESSQ9UNS1 1208 aa1.43□□□□□ -2.18
RPL39P28-201ENST00000465655 TULP1O00294 542 aaPredicted RBP1.42□□□□□ -2.18
RPL39P28-201ENST00000465655 AEBP2Q6ZN18 517 aaPredicted RBP1.41□□□□□ -2.18
RPL39P28-201ENST00000465655 PKNOX2Q96KN3 472 aa1.41□□□□□ -2.18
RPL39P28-201ENST00000465655 ARXQ96QS3 562 aa1.41□□□□□ -2.18
RPL39P28-201ENST00000465655 HRCP23327 699 aa1.4□□□□□ -2.19
RPL39P28-201ENST00000465655 HAP1P54257 671 aaPredicted RBP1.4□□□□□ -2.19
RPL39P28-201ENST00000465655 NEFLP07196 543 aa1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 PDIA4P13667 645 aaKnown RBP1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 PPARGC1BQ86YN6 1023 aaKnown RBP1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 HOMEZQ8IX15 550 aa1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 UBE2Q2Q8WVN8 375 aa1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 ANP32EQ9BTT0 268 aa1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 ANO8Q9HCE9 1232 aaPredicted RBP1.39□□□□□ -2.19
RPL39P28-201ENST00000465655 PDE4CQ08493 712 aa1.38□□□□□ -2.19
RPL39P28-201ENST00000465655 TPRNQ4KMQ1 711 aa1.38□□□□□ -2.19
RPL39P28-201ENST00000465655 NPM2Q86SE8 214 aaKnown RBP1.38□□□□□ -2.19
RPL39P28-201ENST00000465655 A0A0U1RQG5 324 aaPredicted RBP1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 KCNA4P22459 653 aa1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 AMER1Q5JTC6 1135 aaPredicted RBP1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 C14orf37Q86TY3 774 aa1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 CSRNP3Q8WYN3 585 aa1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 CCDC136Q96JN2 1154 aa1.37□□□□□ -2.19
RPL39P28-201ENST00000465655 CHIC1Q5VXU3 224 aa1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 BCL11BQ9C0K0 894 aaPredicted RBP1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 TAOK2Q9UL54 1235 aa1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 GTF3C3Q9Y5Q9 886 aa1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 ACIN1Q9UKV3 1341 aaKnown RBP1.36□□□□□ -2.19
RPL39P28-201ENST00000465655 ZEB1P37275 1124 aaPredicted RBP1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 DHX37Q8IY37 1157 aaKnown RBP1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 POLR3GLQ9BT43 218 aa1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 CHMP4AQ9BY43 222 aa1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 MYT1LQ9UL68 1186 aa1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 SALL2Q9Y467 1007 aaPredicted RBP1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 CLSPNQ9HAW4 1339 aa1.35□□□□□ -2.19
RPL39P28-201ENST00000465655 LOC105371045A0A1W2PR82 267 aa1.34□□□□□ -2.19
RPL39P28-201ENST00000465655 SUPT5HO00267 1087 aaKnown RBP1.34□□□□□ -2.19
RPL39P28-201ENST00000465655 GLIPR1L2Q4G1C9 344 aa1.34□□□□□ -2.19
RPL39P28-201ENST00000465655 TAF7LQ5H9L4 462 aa1.34□□□□□ -2.19
RPL39P28-201ENST00000465655 PAXIP1Q6ZW49 1069 aaPredicted RBP1.34□□□□□ -2.19
RPL39P28-201ENST00000465655 CDK11BP21127 795 aaKnown RBP1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 DEKP35659 375 aaKnown RBP1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 IRX6P78412 446 aaPredicted RBP1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 FGD1P98174 961 aa1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 TRIM26Q12899 539 aaPredicted RBP1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 CDK11AQ9UQ88 783 aaPredicted RBP1.33□□□□□ -2.2
RPL39P28-201ENST00000465655 DCAF8L2P0C7V8 631 aa1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 BRD2P25440 801 aaKnown RBP1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 NEUROD1Q13562 356 aa1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 SAMD1Q6SPF0 538 aaPredicted RBP1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 BCANQ96GW7 911 aa1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 CFAP44Q96MT7 982 aa1.32□□□□□ -2.2
RPL39P28-201ENST00000465655 RBM10P98175 930 aaKnown RBP1.31□□□□□ -2.2
RPL39P28-201ENST00000465655 ERICH6BQ5W0A0 696 aa1.31□□□□□ -2.2
RPL39P28-201ENST00000465655 VSIG10Q8N0Z9 540 aa1.31□□□□□ -2.2
RPL39P28-201ENST00000465655 NAP1L5Q96NT1 182 aaPredicted RBP1.31□□□□□ -2.2
RPL39P28-201ENST00000465655 PCGF6Q9BYE7 350 aa1.31□□□□□ -2.2
RPL39P28-201ENST00000465655 UBTFP17480 764 aaKnown RBP1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 AAMPQ13685 434 aa1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 ZNF326Q5BKZ1 582 aaKnown RBP1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 CNKSR2Q8WXI2 1034 aa1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 YTHDC1Q96MU7 727 aaKnown RBP1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 FBXO3Q9UK99 471 aa1.3□□□□□ -2.2
RPL39P28-201ENST00000465655 HSP90B1P14625 803 aaKnown RBP1.29□□□□□ -2.2
RPL39P28-201ENST00000465655 TMEM132AQ24JP5 1023 aa1.29□□□□□ -2.2
RPL39P28-201ENST00000465655 ZMYND15Q9H091 742 aa1.29□□□□□ -2.2
RPL39P28-201ENST00000465655 CCDC9Q9Y3X0 531 aaKnown RBP1.29□□□□□ -2.2
RPL39P28-201ENST00000465655 SHROOM4Q9ULL8 1493 aa1.29□□□□□ -2.2
RPL39P28-201ENST00000465655 IGSF3O75054 1194 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 RTL5Q5HYW3 569 aaPredicted RBP1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 RSPH4AQ5TD94 716 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 WWC1Q8IX03 1113 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 ZNF526Q8TF50 670 aaPredicted RBP1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 ARID3AQ99856 593 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 RSPH6AQ9H0K4 717 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 CHMP4BQ9H444 224 aaKnown RBP1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 PRDM10Q9NQV6 1147 aa1.28□□□□□ -2.2
RPL39P28-201ENST00000465655 NAP1L2Q9ULW6 460 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms