RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
CHPF2-202ENST00000465601 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
CHPF2-202ENST00000465601 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
CHPF2-202ENST00000465601 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
CHPF2-202ENST00000465601 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
CHPF2-202ENST00000465601 ZFYVE9O95405 1425 aa18.22■□□□□ 0.51
CHPF2-202ENST00000465601 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHPF2-202ENST00000465601 BCANQ96GW7 911 aa18.2■□□□□ 0.5
CHPF2-202ENST00000465601 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
CHPF2-202ENST00000465601 ANKRD30BQ9BXX2 1392 aa18.18■□□□□ 0.5
CHPF2-202ENST00000465601 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
CHPF2-202ENST00000465601 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
CHPF2-202ENST00000465601 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
CHPF2-202ENST00000465601 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
CHPF2-202ENST00000465601 LTBP4Q8N2S1 1624 aa18.13■□□□□ 0.49
CHPF2-202ENST00000465601 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
CHPF2-202ENST00000465601 RPGRIP1LQ68CZ1 1315 aa18.13■□□□□ 0.49
CHPF2-202ENST00000465601 SPATA31E1Q6ZUB1 1445 aa18.13■□□□□ 0.49
CHPF2-202ENST00000465601 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
CHPF2-202ENST00000465601 VGFO15240 615 aaPredicted RBP18.1■□□□□ 0.49
CHPF2-202ENST00000465601 PPLO60437 1756 aa18.09■□□□□ 0.49
CHPF2-202ENST00000465601 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
CHPF2-202ENST00000465601 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
CHPF2-202ENST00000465601 ADAMTS13Q76LX8 1427 aa18.08■□□□□ 0.49
CHPF2-202ENST00000465601 DHX57Q6P158 1386 aaKnown RBP18.07■□□□□ 0.48
CHPF2-202ENST00000465601 KCNA6P17658 529 aa18.06■□□□□ 0.48
CHPF2-202ENST00000465601 ADGRF5Q8IZF2 1346 aa18.05■□□□□ 0.48
CHPF2-202ENST00000465601 NRXN3Q9Y4C0 1643 aa18.04■□□□□ 0.48
CHPF2-202ENST00000465601 SETBP1Q9Y6X0 1596 aa18.04■□□□□ 0.48
CHPF2-202ENST00000465601 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
CHPF2-202ENST00000465601 CPS1P31327 1500 aa18.03■□□□□ 0.48
CHPF2-202ENST00000465601 CHD2O14647 1828 aaKnown RBP18.03■□□□□ 0.48
CHPF2-202ENST00000465601 SIN3AQ96ST3 1273 aa18.03■□□□□ 0.48
CHPF2-202ENST00000465601 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
CHPF2-202ENST00000465601 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
CHPF2-202ENST00000465601 NEUROD1Q13562 356 aa18■□□□□ 0.47
CHPF2-202ENST00000465601 DCAF11Q8TEB1 546 aa18■□□□□ 0.47
CHPF2-202ENST00000465601 METP08581 1390 aa18■□□□□ 0.47
CHPF2-202ENST00000465601 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
CHPF2-202ENST00000465601 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
CHPF2-202ENST00000465601 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
CHPF2-202ENST00000465601 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
CHPF2-202ENST00000465601 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
CHPF2-202ENST00000465601 PIK3R4Q99570 1358 aa17.98■□□□□ 0.47
CHPF2-202ENST00000465601 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
CHPF2-202ENST00000465601 NWD1Q149M9 1564 aa17.96■□□□□ 0.47
CHPF2-202ENST00000465601 IQSEC2Q5JU85 1478 aa17.96■□□□□ 0.47
CHPF2-202ENST00000465601 FBXO41Q8TF61 875 aa17.96■□□□□ 0.47
CHPF2-202ENST00000465601 SETD1AO15047 1707 aaKnown RBP17.95■□□□□ 0.46
CHPF2-202ENST00000465601 XIRP1Q702N8 1843 aaKnown RBP17.95■□□□□ 0.46
CHPF2-202ENST00000465601 MYOM2P54296 1465 aa17.95■□□□□ 0.46
CHPF2-202ENST00000465601 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
CHPF2-202ENST00000465601 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
CHPF2-202ENST00000465601 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
CHPF2-202ENST00000465601 CFAP70Q5T0N1 1121 aa17.93■□□□□ 0.46
CHPF2-202ENST00000465601 ILDR1Q86SU0 546 aaPredicted RBP17.93■□□□□ 0.46
CHPF2-202ENST00000465601 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
CHPF2-202ENST00000465601 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
CHPF2-202ENST00000465601 NRXN1Q9ULB1 1477 aa17.93■□□□□ 0.46
CHPF2-202ENST00000465601 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
CHPF2-202ENST00000465601 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
CHPF2-202ENST00000465601 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
CHPF2-202ENST00000465601 STK26Q9P289 416 aa17.9■□□□□ 0.46
CHPF2-202ENST00000465601 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.46
CHPF2-202ENST00000465601 TOM1O60784 492 aa17.88■□□□□ 0.45
CHPF2-202ENST00000465601 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
CHPF2-202ENST00000465601 ASXL1Q8IXJ9 1541 aa17.86■□□□□ 0.45
CHPF2-202ENST00000465601 PIP4K2BP78356 416 aa17.85■□□□□ 0.45
CHPF2-202ENST00000465601 ROBO2Q9HCK4 1378 aa17.85■□□□□ 0.45
CHPF2-202ENST00000465601 LAMC1P11047 1609 aa17.84■□□□□ 0.45
CHPF2-202ENST00000465601 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
CHPF2-202ENST00000465601 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
CHPF2-202ENST00000465601 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.45
CHPF2-202ENST00000465601 NCOA3Q9Y6Q9 1424 aa17.83■□□□□ 0.45
CHPF2-202ENST00000465601 MSH6P52701 1360 aa17.83■□□□□ 0.45
CHPF2-202ENST00000465601 ABCC11Q96J66 1382 aa17.82■□□□□ 0.44
CHPF2-202ENST00000465601 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
CHPF2-202ENST00000465601 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
CHPF2-202ENST00000465601 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
CHPF2-202ENST00000465601 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
CHPF2-202ENST00000465601 WAPLQ7Z5K2 1190 aa17.81■□□□□ 0.44
CHPF2-202ENST00000465601 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
CHPF2-202ENST00000465601 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.8■□□□□ 0.44
CHPF2-202ENST00000465601 ATF3P18847 181 aa17.79■□□□□ 0.44
CHPF2-202ENST00000465601 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
CHPF2-202ENST00000465601 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
CHPF2-202ENST00000465601 TECPR2O15040 1411 aa17.79■□□□□ 0.44
CHPF2-202ENST00000465601 ADGRB1O14514 1584 aa17.79■□□□□ 0.44
CHPF2-202ENST00000465601 KNDC1Q76NI1 1749 aa17.78■□□□□ 0.44
CHPF2-202ENST00000465601 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
CHPF2-202ENST00000465601 CADPS2Q86UW7 1296 aa17.77■□□□□ 0.44
CHPF2-202ENST00000465601 SIRT1Q96EB6 747 aa17.77■□□□□ 0.44
CHPF2-202ENST00000465601 SLAIN2Q9P270 581 aa17.77■□□□□ 0.44
CHPF2-202ENST00000465601 KIAA1210Q9ULL0 1709 aa17.77■□□□□ 0.44
CHPF2-202ENST00000465601 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.43
CHPF2-202ENST00000465601 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
CHPF2-202ENST00000465601 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
CHPF2-202ENST00000465601 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
CHPF2-202ENST00000465601 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHPF2-202ENST00000465601 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms