RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 LRRC7Q96NW7 1537 aa18.12■□□□□ 0.49
TMCO3-205ENST00000465556 CHD2O14647 1828 aaKnown RBP18.11■□□□□ 0.49
TMCO3-205ENST00000465556 DIP2AQ14689 1571 aa18.09■□□□□ 0.49
TMCO3-205ENST00000465556 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
TMCO3-205ENST00000465556 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
TMCO3-205ENST00000465556 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
TMCO3-205ENST00000465556 UBAP1LF5GYI3 381 aa18.06■□□□□ 0.48
TMCO3-205ENST00000465556 CHGAP10645 457 aaKnown RBP18.06■□□□□ 0.48
TMCO3-205ENST00000465556 TRIM52Q96A61 297 aa18.06■□□□□ 0.48
TMCO3-205ENST00000465556 NKTRP30414 1462 aaKnown RBP18.06■□□□□ 0.48
TMCO3-205ENST00000465556 NEXMIFQ5QGS0 1516 aa18.05■□□□□ 0.48
TMCO3-205ENST00000465556 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
TMCO3-205ENST00000465556 PPLO60437 1756 aa18.03■□□□□ 0.48
TMCO3-205ENST00000465556 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
TMCO3-205ENST00000465556 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.02■□□□□ 0.48
TMCO3-205ENST00000465556 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
TMCO3-205ENST00000465556 ADAMTS13Q76LX8 1427 aa18.01■□□□□ 0.47
TMCO3-205ENST00000465556 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
TMCO3-205ENST00000465556 HDGFP51858 240 aaKnown RBP18■□□□□ 0.47
TMCO3-205ENST00000465556 SETD5Q9C0A6 1442 aa17.99■□□□□ 0.47
TMCO3-205ENST00000465556 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
TMCO3-205ENST00000465556 IFT172Q9UG01 1749 aa17.99■□□□□ 0.47
TMCO3-205ENST00000465556 BCANQ96GW7 911 aa17.99■□□□□ 0.47
TMCO3-205ENST00000465556 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
TMCO3-205ENST00000465556 SETD1AO15047 1707 aaKnown RBP17.98■□□□□ 0.47
TMCO3-205ENST00000465556 KCNA6P17658 529 aa17.97■□□□□ 0.47
TMCO3-205ENST00000465556 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
TMCO3-205ENST00000465556 TOM1O60784 492 aa17.96■□□□□ 0.47
TMCO3-205ENST00000465556 TMEM94Q12767 1356 aa17.95■□□□□ 0.46
TMCO3-205ENST00000465556 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
TMCO3-205ENST00000465556 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
TMCO3-205ENST00000465556 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
TMCO3-205ENST00000465556 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
TMCO3-205ENST00000465556 PIP4K2BP78356 416 aa17.93■□□□□ 0.46
TMCO3-205ENST00000465556 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
TMCO3-205ENST00000465556 CCDC144AA2RUR9 1427 aa17.92■□□□□ 0.46
TMCO3-205ENST00000465556 FOXD1Q16676 465 aa17.92■□□□□ 0.46
TMCO3-205ENST00000465556 ACIN1Q9UKV3 1341 aaKnown RBP17.92■□□□□ 0.46
TMCO3-205ENST00000465556 MPHOSPH9Q99550 1183 aa17.91■□□□□ 0.46
TMCO3-205ENST00000465556 ROBO1Q9Y6N7 1651 aa17.9■□□□□ 0.46
TMCO3-205ENST00000465556 PTPRUQ92729 1446 aa17.89■□□□□ 0.46
TMCO3-205ENST00000465556 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.46
TMCO3-205ENST00000465556 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
TMCO3-205ENST00000465556 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
TMCO3-205ENST00000465556 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
TMCO3-205ENST00000465556 MSH6P52701 1360 aa17.86■□□□□ 0.45
TMCO3-205ENST00000465556 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
TMCO3-205ENST00000465556 HSPA1LP34931 641 aa17.85■□□□□ 0.45
TMCO3-205ENST00000465556 NCOA3Q9Y6Q9 1424 aa17.85■□□□□ 0.45
TMCO3-205ENST00000465556 METP08581 1390 aa17.84■□□□□ 0.45
TMCO3-205ENST00000465556 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
TMCO3-205ENST00000465556 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
TMCO3-205ENST00000465556 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
TMCO3-205ENST00000465556 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
TMCO3-205ENST00000465556 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
TMCO3-205ENST00000465556 AMOTL2Q9Y2J4 779 aa17.8■□□□□ 0.44
TMCO3-205ENST00000465556 PHLPP1O60346 1717 aa17.8■□□□□ 0.44
TMCO3-205ENST00000465556 PRAG1Q86YV5 1406 aa17.8■□□□□ 0.44
TMCO3-205ENST00000465556 LAMC1P11047 1609 aa17.8■□□□□ 0.44
TMCO3-205ENST00000465556 DCCP43146 1447 aa17.79■□□□□ 0.44
TMCO3-205ENST00000465556 PTCH1Q13635 1447 aa17.79■□□□□ 0.44
TMCO3-205ENST00000465556 ANKRD30BQ9BXX2 1392 aa17.79■□□□□ 0.44
TMCO3-205ENST00000465556 ASXL1Q8IXJ9 1541 aa17.78■□□□□ 0.44
TMCO3-205ENST00000465556 DISP3Q9P2K9 1392 aa17.78■□□□□ 0.44
TMCO3-205ENST00000465556 PIK3C2GO75747 1445 aa17.77■□□□□ 0.44
TMCO3-205ENST00000465556 MYOM2P54296 1465 aa17.76■□□□□ 0.43
TMCO3-205ENST00000465556 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
TMCO3-205ENST00000465556 HRCP23327 699 aa17.76■□□□□ 0.43
TMCO3-205ENST00000465556 C14orf37Q86TY3 774 aa17.76■□□□□ 0.43
TMCO3-205ENST00000465556 COL16A1Q07092 1604 aaPredicted RBP17.75■□□□□ 0.43
TMCO3-205ENST00000465556 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
TMCO3-205ENST00000465556 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
TMCO3-205ENST00000465556 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
TMCO3-205ENST00000465556 AHDC1Q5TGY3 1603 aaPredicted RBP17.73■□□□□ 0.43
TMCO3-205ENST00000465556 C19orf44Q9H6X5 657 aa17.72■□□□□ 0.43
TMCO3-205ENST00000465556 NHSL1Q5SYE7 1610 aa17.72■□□□□ 0.43
TMCO3-205ENST00000465556 ROBO2Q9HCK4 1378 aa17.71■□□□□ 0.43
TMCO3-205ENST00000465556 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.43
TMCO3-205ENST00000465556 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
TMCO3-205ENST00000465556 TECPR2O15040 1411 aa17.7■□□□□ 0.42
TMCO3-205ENST00000465556 MST1RQ04912 1400 aa17.7■□□□□ 0.42
TMCO3-205ENST00000465556 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
TMCO3-205ENST00000465556 ATF3P18847 181 aa17.69■□□□□ 0.42
TMCO3-205ENST00000465556 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
TMCO3-205ENST00000465556 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
TMCO3-205ENST00000465556 FMN2Q9NZ56 1722 aa17.64■□□□□ 0.41
TMCO3-205ENST00000465556 YTHDC2Q9H6S0 1430 aaKnown RBP17.64■□□□□ 0.41
TMCO3-205ENST00000465556 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
TMCO3-205ENST00000465556 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
TMCO3-205ENST00000465556 ABCC11Q96J66 1382 aa17.61■□□□□ 0.41
TMCO3-205ENST00000465556 C1orf167Q5SNV9 1468 aa17.6■□□□□ 0.41
TMCO3-205ENST00000465556 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
TMCO3-205ENST00000465556 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
TMCO3-205ENST00000465556 JCADQ9P266 1359 aa17.59■□□□□ 0.41
TMCO3-205ENST00000465556 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
TMCO3-205ENST00000465556 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
TMCO3-205ENST00000465556 ARHGEF28Q8N1W1 1705 aaKnown RBP17.58■□□□□ 0.41
TMCO3-205ENST00000465556 DHX57Q6P158 1386 aaKnown RBP17.58■□□□□ 0.4
TMCO3-205ENST00000465556 ILDR2Q71H61 639 aa17.58■□□□□ 0.4
TMCO3-205ENST00000465556 C14orf93Q9H972 538 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms