RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 KCNA6P17658 529 aa24.27■■□□□ 1.48
SSNA1-204ENST00000464553 TBX22Q9Y458 520 aa24.27■■□□□ 1.48
SSNA1-204ENST00000464553 UBAP1LF5GYI3 381 aa24.26■■□□□ 1.47
SSNA1-204ENST00000464553 TOM1O60784 492 aa24.26■■□□□ 1.47
SSNA1-204ENST00000464553 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
SSNA1-204ENST00000464553 BCANQ96GW7 911 aa24.25■■□□□ 1.47
SSNA1-204ENST00000464553 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
SSNA1-204ENST00000464553 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
SSNA1-204ENST00000464553 TRPM2O94759 1503 aa24.24■■□□□ 1.47
SSNA1-204ENST00000464553 HRCP23327 699 aa24.22■■□□□ 1.47
SSNA1-204ENST00000464553 MPHOSPH9Q99550 1183 aa24.22■■□□□ 1.47
SSNA1-204ENST00000464553 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
SSNA1-204ENST00000464553 PIK3R4Q99570 1358 aa24.18■■□□□ 1.46
SSNA1-204ENST00000464553 RPGRIP1LQ68CZ1 1315 aa24.18■■□□□ 1.46
SSNA1-204ENST00000464553 ZNF326Q5BKZ1 582 aaKnown RBP24.18■■□□□ 1.46
SSNA1-204ENST00000464553 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
SSNA1-204ENST00000464553 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.46
SSNA1-204ENST00000464553 PROSER2Q86WR7 435 aaPredicted RBP24.14■■□□□ 1.45
SSNA1-204ENST00000464553 VGFO15240 615 aaPredicted RBP24.13■■□□□ 1.45
SSNA1-204ENST00000464553 NKTRP30414 1462 aaKnown RBP24.13■■□□□ 1.45
SSNA1-204ENST00000464553 DIP2AQ14689 1571 aa24.12■■□□□ 1.45
SSNA1-204ENST00000464553 ADAMTS13Q76LX8 1427 aa24.12■■□□□ 1.45
SSNA1-204ENST00000464553 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
SSNA1-204ENST00000464553 CLTCL1P53675 1640 aa24.12■■□□□ 1.45
SSNA1-204ENST00000464553 RAB3GAP2Q9H2M9 1393 aa24.11■■□□□ 1.45
SSNA1-204ENST00000464553 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
SSNA1-204ENST00000464553 CCDC144AA2RUR9 1427 aa24.09■■□□□ 1.45
SSNA1-204ENST00000464553 NWD1Q149M9 1564 aa24.08■■□□□ 1.45
SSNA1-204ENST00000464553 TMEM94Q12767 1356 aa24.08■■□□□ 1.45
SSNA1-204ENST00000464553 KIF1BO60333 1816 aa24.07■■□□□ 1.44
SSNA1-204ENST00000464553 FOXD1Q16676 465 aa24.07■■□□□ 1.44
SSNA1-204ENST00000464553 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
SSNA1-204ENST00000464553 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
SSNA1-204ENST00000464553 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
SSNA1-204ENST00000464553 CHD2O14647 1828 aaKnown RBP24.04■■□□□ 1.44
SSNA1-204ENST00000464553 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
SSNA1-204ENST00000464553 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
SSNA1-204ENST00000464553 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
SSNA1-204ENST00000464553 MSH6P52701 1360 aa24■■□□□ 1.43
SSNA1-204ENST00000464553 ANKRD30BQ9BXX2 1392 aa23.99■■□□□ 1.43
SSNA1-204ENST00000464553 SPATA31E1Q6ZUB1 1445 aa23.99■■□□□ 1.43
SSNA1-204ENST00000464553 ALKQ9UM73 1620 aa23.99■■□□□ 1.43
SSNA1-204ENST00000464553 C19orf44Q9H6X5 657 aa23.97■■□□□ 1.43
SSNA1-204ENST00000464553 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
SSNA1-204ENST00000464553 FAM135BQ49AJ0 1406 aa23.96■■□□□ 1.43
SSNA1-204ENST00000464553 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.43
SSNA1-204ENST00000464553 HSPA1LP34931 641 aa23.95■■□□□ 1.42
SSNA1-204ENST00000464553 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
SSNA1-204ENST00000464553 METP08581 1390 aa23.94■■□□□ 1.42
SSNA1-204ENST00000464553 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
SSNA1-204ENST00000464553 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
SSNA1-204ENST00000464553 RBM33Q96EV2 1170 aaKnown RBP23.92■■□□□ 1.42
SSNA1-204ENST00000464553 SLAIN2Q9P270 581 aa23.92■■□□□ 1.42
SSNA1-204ENST00000464553 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
SSNA1-204ENST00000464553 STAC3Q96MF2 364 aa23.9■■□□□ 1.42
SSNA1-204ENST00000464553 ATF3P18847 181 aa23.88■■□□□ 1.41
SSNA1-204ENST00000464553 PPLO60437 1756 aa23.88■■□□□ 1.41
SSNA1-204ENST00000464553 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
SSNA1-204ENST00000464553 PRAG1Q86YV5 1406 aa23.86■■□□□ 1.41
SSNA1-204ENST00000464553 XRN1Q8IZH2 1706 aaKnown RBP23.85■■□□□ 1.41
SSNA1-204ENST00000464553 DCCP43146 1447 aa23.84■■□□□ 1.41
SSNA1-204ENST00000464553 PTCH1Q13635 1447 aa23.82■■□□□ 1.4
SSNA1-204ENST00000464553 C14orf93Q9H972 538 aaKnown RBP23.8■■□□□ 1.4
SSNA1-204ENST00000464553 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
SSNA1-204ENST00000464553 MYOM2P54296 1465 aa23.78■■□□□ 1.4
SSNA1-204ENST00000464553 IFT172Q9UG01 1749 aa23.78■■□□□ 1.4
SSNA1-204ENST00000464553 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
SSNA1-204ENST00000464553 SETD1AO15047 1707 aaKnown RBP23.77■■□□□ 1.4
SSNA1-204ENST00000464553 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
SSNA1-204ENST00000464553 ABCC11Q96J66 1382 aa23.77■■□□□ 1.4
SSNA1-204ENST00000464553 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
SSNA1-204ENST00000464553 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
SSNA1-204ENST00000464553 DISP3Q9P2K9 1392 aa23.76■■□□□ 1.39
SSNA1-204ENST00000464553 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
SSNA1-204ENST00000464553 ROBO2Q9HCK4 1378 aa23.75■■□□□ 1.39
SSNA1-204ENST00000464553 TECPR2O15040 1411 aa23.74■■□□□ 1.39
SSNA1-204ENST00000464553 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
SSNA1-204ENST00000464553 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
SSNA1-204ENST00000464553 DCAF11Q8TEB1 546 aa23.7■■□□□ 1.38
SSNA1-204ENST00000464553 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
SSNA1-204ENST00000464553 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-204ENST00000464553 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
SSNA1-204ENST00000464553 BRINP3Q76B58 766 aa23.68■■□□□ 1.38
SSNA1-204ENST00000464553 MST1RQ04912 1400 aa23.67■■□□□ 1.38
SSNA1-204ENST00000464553 YTHDC2Q9H6S0 1430 aaKnown RBP23.67■■□□□ 1.38
SSNA1-204ENST00000464553 STK26Q9P289 416 aa23.67■■□□□ 1.38
SSNA1-204ENST00000464553 LAMC1P11047 1609 aa23.66■■□□□ 1.38
SSNA1-204ENST00000464553 KDM2AQ9Y2K7 1162 aa23.65■■□□□ 1.38
SSNA1-204ENST00000464553 JCADQ9P266 1359 aa23.63■■□□□ 1.37
SSNA1-204ENST00000464553 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
SSNA1-204ENST00000464553 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
SSNA1-204ENST00000464553 AHDC1Q5TGY3 1603 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-204ENST00000464553 C1orf167Q5SNV9 1468 aa23.61■■□□□ 1.37
SSNA1-204ENST00000464553 MED1Q15648 1581 aaPredicted RBP23.61■■□□□ 1.37
SSNA1-204ENST00000464553 NALCNQ8IZF0 1738 aa23.6■■□□□ 1.37
SSNA1-204ENST00000464553 KNDC1Q76NI1 1749 aa23.59■■□□□ 1.37
SSNA1-204ENST00000464553 PHLPP1O60346 1717 aa23.58■■□□□ 1.37
SSNA1-204ENST00000464553 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
SSNA1-204ENST00000464553 SPATA31A6Q5VVP1 1343 aa23.57■■□□□ 1.36
SSNA1-204ENST00000464553 CDC42BPGQ6DT37 1551 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms