RNA–Protein interactions for RNA: ENST00000463963.1

HS6ST1-202, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

TSL 2

Gene HS6ST1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-202ENST00000463963 E9PCH4 1651 aa22.28■■□□□ 1.16
HS6ST1-202ENST00000463963 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
HS6ST1-202ENST00000463963 PPARGC1BQ86YN6 1023 aaKnown RBP22.28■■□□□ 1.16
HS6ST1-202ENST00000463963 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
HS6ST1-202ENST00000463963 TMEM94Q12767 1356 aa22.27■■□□□ 1.16
HS6ST1-202ENST00000463963 TMEM131LA2VDJ0 1609 aa22.27■■□□□ 1.16
HS6ST1-202ENST00000463963 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
HS6ST1-202ENST00000463963 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
HS6ST1-202ENST00000463963 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
HS6ST1-202ENST00000463963 PROSER2Q86WR7 435 aaPredicted RBP22.26■■□□□ 1.15
HS6ST1-202ENST00000463963 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
HS6ST1-202ENST00000463963 ZFYVE9O95405 1425 aa22.25■■□□□ 1.15
HS6ST1-202ENST00000463963 NWD1Q149M9 1564 aa22.25■■□□□ 1.15
HS6ST1-202ENST00000463963 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
HS6ST1-202ENST00000463963 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
HS6ST1-202ENST00000463963 NUP155O75694 1391 aa22.23■■□□□ 1.15
HS6ST1-202ENST00000463963 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
HS6ST1-202ENST00000463963 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
HS6ST1-202ENST00000463963 FAM135BQ49AJ0 1406 aa22.19■■□□□ 1.14
HS6ST1-202ENST00000463963 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
HS6ST1-202ENST00000463963 MSH6P52701 1360 aa22.17■■□□□ 1.14
HS6ST1-202ENST00000463963 ROBO1Q9Y6N7 1651 aa22.17■■□□□ 1.14
HS6ST1-202ENST00000463963 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
HS6ST1-202ENST00000463963 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
HS6ST1-202ENST00000463963 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
HS6ST1-202ENST00000463963 SPHKAPQ2M3C7 1700 aa22.12■■□□□ 1.13
HS6ST1-202ENST00000463963 ADAMTS13Q76LX8 1427 aa22.1■■□□□ 1.13
HS6ST1-202ENST00000463963 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
HS6ST1-202ENST00000463963 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
HS6ST1-202ENST00000463963 TRPM2O94759 1503 aa22.07■■□□□ 1.12
HS6ST1-202ENST00000463963 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
HS6ST1-202ENST00000463963 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
HS6ST1-202ENST00000463963 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
HS6ST1-202ENST00000463963 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
HS6ST1-202ENST00000463963 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
HS6ST1-202ENST00000463963 RGS17Q9UGC6 210 aaPredicted RBP22.02■■□□□ 1.12
HS6ST1-202ENST00000463963 NAIPQ13075 1403 aa22.01■■□□□ 1.11
HS6ST1-202ENST00000463963 NRXN3Q9Y4C0 1643 aa22.01■■□□□ 1.11
HS6ST1-202ENST00000463963 SIPA1L2Q9P2F8 1722 aaPredicted RBP22■■□□□ 1.11
HS6ST1-202ENST00000463963 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
HS6ST1-202ENST00000463963 CLTCL1P53675 1640 aa21.99■■□□□ 1.11
HS6ST1-202ENST00000463963 ATF3P18847 181 aa21.99■■□□□ 1.11
HS6ST1-202ENST00000463963 CADPS2Q86UW7 1296 aa21.99■■□□□ 1.11
HS6ST1-202ENST00000463963 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
HS6ST1-202ENST00000463963 C19orf44Q9H6X5 657 aa21.98■■□□□ 1.11
HS6ST1-202ENST00000463963 PTPRUQ92729 1446 aa21.97■■□□□ 1.11
HS6ST1-202ENST00000463963 KIF1BO60333 1816 aa21.96■■□□□ 1.11
HS6ST1-202ENST00000463963 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
HS6ST1-202ENST00000463963 JCADQ9P266 1359 aa21.96■■□□□ 1.11
HS6ST1-202ENST00000463963 COL16A1Q07092 1604 aaPredicted RBP21.95■■□□□ 1.1
HS6ST1-202ENST00000463963 XRN1Q8IZH2 1706 aaKnown RBP21.94■■□□□ 1.1
HS6ST1-202ENST00000463963 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
HS6ST1-202ENST00000463963 HFM1A2PYH4 1435 aa21.93■■□□□ 1.1
HS6ST1-202ENST00000463963 METP08581 1390 aa21.9■■□□□ 1.1
HS6ST1-202ENST00000463963 AHDC1Q5TGY3 1603 aaPredicted RBP21.9■■□□□ 1.1
HS6ST1-202ENST00000463963 DCCP43146 1447 aa21.89■■□□□ 1.1
HS6ST1-202ENST00000463963 POTEAQ6S8J7 498 aa21.88■■□□□ 1.09
HS6ST1-202ENST00000463963 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
HS6ST1-202ENST00000463963 BRINP3Q76B58 766 aa21.85■■□□□ 1.09
HS6ST1-202ENST00000463963 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
HS6ST1-202ENST00000463963 MEX3CQ5U5Q3 659 aaKnown RBP21.84■■□□□ 1.09
HS6ST1-202ENST00000463963 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
HS6ST1-202ENST00000463963 VGFO15240 615 aaPredicted RBP21.83■■□□□ 1.09
HS6ST1-202ENST00000463963 ASXL1Q8IXJ9 1541 aa21.83■■□□□ 1.09
HS6ST1-202ENST00000463963 MST1RQ04912 1400 aa21.82■■□□□ 1.08
HS6ST1-202ENST00000463963 ADGRL3Q9HAR2 1447 aa21.82■■□□□ 1.08
HS6ST1-202ENST00000463963 SETD1AO15047 1707 aaKnown RBP21.82■■□□□ 1.08
HS6ST1-202ENST00000463963 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
HS6ST1-202ENST00000463963 LRP6O75581 1613 aa21.81■■□□□ 1.08
HS6ST1-202ENST00000463963 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
HS6ST1-202ENST00000463963 PPLO60437 1756 aa21.79■■□□□ 1.08
HS6ST1-202ENST00000463963 NHSL1Q5SYE7 1610 aa21.78■■□□□ 1.08
HS6ST1-202ENST00000463963 PTCH1Q13635 1447 aa21.77■■□□□ 1.08
HS6ST1-202ENST00000463963 FOXD1Q16676 465 aa21.76■■□□□ 1.07
HS6ST1-202ENST00000463963 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
HS6ST1-202ENST00000463963 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
HS6ST1-202ENST00000463963 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
HS6ST1-202ENST00000463963 CCDC144AA2RUR9 1427 aa21.73■■□□□ 1.07
HS6ST1-202ENST00000463963 SETD5Q9C0A6 1442 aa21.73■■□□□ 1.07
HS6ST1-202ENST00000463963 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
HS6ST1-202ENST00000463963 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
HS6ST1-202ENST00000463963 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
HS6ST1-202ENST00000463963 C1orf167Q5SNV9 1468 aa21.71■■□□□ 1.07
HS6ST1-202ENST00000463963 DDX17Q92841 729 aaKnown RBP21.7■■□□□ 1.06
HS6ST1-202ENST00000463963 PRAG1Q86YV5 1406 aa21.7■■□□□ 1.06
HS6ST1-202ENST00000463963 MPHOSPH9Q99550 1183 aa21.69■■□□□ 1.06
HS6ST1-202ENST00000463963 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
HS6ST1-202ENST00000463963 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
HS6ST1-202ENST00000463963 ADGRF5Q8IZF2 1346 aa21.65■■□□□ 1.06
HS6ST1-202ENST00000463963 IFT172Q9UG01 1749 aa21.65■■□□□ 1.06
HS6ST1-202ENST00000463963 LAMC1P11047 1609 aa21.65■■□□□ 1.06
HS6ST1-202ENST00000463963 SPATA31E1Q6ZUB1 1445 aa21.64■■□□□ 1.06
HS6ST1-202ENST00000463963 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
HS6ST1-202ENST00000463963 AFF2P51816 1311 aa21.63■■□□□ 1.05
HS6ST1-202ENST00000463963 ORAI2Q96SN7 254 aa21.63■■□□□ 1.05
HS6ST1-202ENST00000463963 RXRBP28702 533 aa21.62■■□□□ 1.05
HS6ST1-202ENST00000463963 C8orf37Q96NL8 207 aa21.61■■□□□ 1.05
HS6ST1-202ENST00000463963 STK26Q9P289 416 aa21.61■■□□□ 1.05
HS6ST1-202ENST00000463963 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
HS6ST1-202ENST00000463963 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms