RNA–Protein interactions for RNA: ENST00000463732.5

HDAC7-218, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-218ENST00000463732 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
HDAC7-218ENST00000463732 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
HDAC7-218ENST00000463732 KIF1BO60333 1816 aa23.94■■□□□ 1.42
HDAC7-218ENST00000463732 PLEKHG1Q9ULL1 1385 aa23.93■■□□□ 1.42
HDAC7-218ENST00000463732 CHGAP10645 457 aaKnown RBP23.92■■□□□ 1.42
HDAC7-218ENST00000463732 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
HDAC7-218ENST00000463732 STRCP1A6NGW2 1772 aa23.9■■□□□ 1.42
HDAC7-218ENST00000463732 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
HDAC7-218ENST00000463732 RAB3GAP2Q9H2M9 1393 aa23.87■■□□□ 1.41
HDAC7-218ENST00000463732 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
HDAC7-218ENST00000463732 NWD1Q149M9 1564 aa23.85■■□□□ 1.41
HDAC7-218ENST00000463732 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
HDAC7-218ENST00000463732 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
HDAC7-218ENST00000463732 HRCP23327 699 aa23.82■■□□□ 1.4
HDAC7-218ENST00000463732 BCANQ96GW7 911 aa23.82■■□□□ 1.4
HDAC7-218ENST00000463732 NEXMIFQ5QGS0 1516 aa23.82■■□□□ 1.4
HDAC7-218ENST00000463732 SLC26A8Q96RN1 970 aa23.81■■□□□ 1.4
HDAC7-218ENST00000463732 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
HDAC7-218ENST00000463732 KCNA6P17658 529 aa23.8■■□□□ 1.4
HDAC7-218ENST00000463732 ZNF326Q5BKZ1 582 aaKnown RBP23.8■■□□□ 1.4
HDAC7-218ENST00000463732 SETBP1Q9Y6X0 1596 aa23.8■■□□□ 1.4
HDAC7-218ENST00000463732 TBX22Q9Y458 520 aa23.79■■□□□ 1.4
HDAC7-218ENST00000463732 PIK3R4Q99570 1358 aa23.78■■□□□ 1.4
HDAC7-218ENST00000463732 ADAMTS13Q76LX8 1427 aa23.78■■□□□ 1.4
HDAC7-218ENST00000463732 CHD2O14647 1828 aaKnown RBP23.78■■□□□ 1.4
HDAC7-218ENST00000463732 RPGRIP1LQ68CZ1 1315 aa23.77■■□□□ 1.4
HDAC7-218ENST00000463732 UBAP1LF5GYI3 381 aa23.76■■□□□ 1.39
HDAC7-218ENST00000463732 NRXN3Q9Y4C0 1643 aa23.75■■□□□ 1.39
HDAC7-218ENST00000463732 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
HDAC7-218ENST00000463732 PPLO60437 1756 aa23.74■■□□□ 1.39
HDAC7-218ENST00000463732 TOM1O60784 492 aa23.74■■□□□ 1.39
HDAC7-218ENST00000463732 FOXD1Q16676 465 aa23.74■■□□□ 1.39
HDAC7-218ENST00000463732 NUTM2DQ5VT03 806 aaPredicted RBP23.72■■□□□ 1.39
HDAC7-218ENST00000463732 VGFO15240 615 aaPredicted RBP23.71■■□□□ 1.39
HDAC7-218ENST00000463732 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
HDAC7-218ENST00000463732 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
HDAC7-218ENST00000463732 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
HDAC7-218ENST00000463732 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
HDAC7-218ENST00000463732 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
HDAC7-218ENST00000463732 XRN1Q8IZH2 1706 aaKnown RBP23.66■■□□□ 1.38
HDAC7-218ENST00000463732 ANKRD30BQ9BXX2 1392 aa23.65■■□□□ 1.38
HDAC7-218ENST00000463732 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-218ENST00000463732 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
HDAC7-218ENST00000463732 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
HDAC7-218ENST00000463732 MSH6P52701 1360 aa23.6■■□□□ 1.37
HDAC7-218ENST00000463732 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
HDAC7-218ENST00000463732 AMOTL2Q9Y2J4 779 aa23.58■■□□□ 1.37
HDAC7-218ENST00000463732 SCAF1Q9H7N4 1312 aaKnown RBP23.58■■□□□ 1.36
HDAC7-218ENST00000463732 METP08581 1390 aa23.57■■□□□ 1.36
HDAC7-218ENST00000463732 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
HDAC7-218ENST00000463732 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
HDAC7-218ENST00000463732 MYOM2P54296 1465 aa23.56■■□□□ 1.36
HDAC7-218ENST00000463732 RGL3Q3MIN7 710 aa23.55■■□□□ 1.36
HDAC7-218ENST00000463732 LAMC1P11047 1609 aa23.53■■□□□ 1.36
HDAC7-218ENST00000463732 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
HDAC7-218ENST00000463732 DCCP43146 1447 aa23.52■■□□□ 1.36
HDAC7-218ENST00000463732 PTCH1Q13635 1447 aa23.52■■□□□ 1.36
HDAC7-218ENST00000463732 NRXN1Q9ULB1 1477 aa23.51■■□□□ 1.35
HDAC7-218ENST00000463732 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
HDAC7-218ENST00000463732 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
HDAC7-218ENST00000463732 C14orf37Q86TY3 774 aa23.49■■□□□ 1.35
HDAC7-218ENST00000463732 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
HDAC7-218ENST00000463732 C19orf44Q9H6X5 657 aa23.49■■□□□ 1.35
HDAC7-218ENST00000463732 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
HDAC7-218ENST00000463732 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
HDAC7-218ENST00000463732 CADPS2Q86UW7 1296 aa23.46■■□□□ 1.35
HDAC7-218ENST00000463732 ROBO1Q9Y6N7 1651 aa23.46■■□□□ 1.35
HDAC7-218ENST00000463732 KNDC1Q76NI1 1749 aa23.45■■□□□ 1.34
HDAC7-218ENST00000463732 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
HDAC7-218ENST00000463732 HSPA1LP34931 641 aa23.45■■□□□ 1.34
HDAC7-218ENST00000463732 NALCNQ8IZF0 1738 aa23.44■■□□□ 1.34
HDAC7-218ENST00000463732 TECPR2O15040 1411 aa23.43■■□□□ 1.34
HDAC7-218ENST00000463732 ATF3P18847 181 aa23.43■■□□□ 1.34
HDAC7-218ENST00000463732 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
HDAC7-218ENST00000463732 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
HDAC7-218ENST00000463732 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
HDAC7-218ENST00000463732 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
HDAC7-218ENST00000463732 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
HDAC7-218ENST00000463732 C14orf93Q9H972 538 aaKnown RBP23.38■■□□□ 1.33
HDAC7-218ENST00000463732 ABCC11Q96J66 1382 aa23.38■■□□□ 1.33
HDAC7-218ENST00000463732 YTHDC2Q9H6S0 1430 aaKnown RBP23.36■■□□□ 1.33
HDAC7-218ENST00000463732 DCAF11Q8TEB1 546 aa23.34■■□□□ 1.33
HDAC7-218ENST00000463732 DHX57Q6P158 1386 aaKnown RBP23.34■■□□□ 1.33
HDAC7-218ENST00000463732 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
HDAC7-218ENST00000463732 MST1RQ04912 1400 aa23.33■■□□□ 1.33
HDAC7-218ENST00000463732 PHLPP1O60346 1717 aa23.33■■□□□ 1.32
HDAC7-218ENST00000463732 AHDC1Q5TGY3 1603 aaPredicted RBP23.33■■□□□ 1.32
HDAC7-218ENST00000463732 SIRT1Q96EB6 747 aa23.31■■□□□ 1.32
HDAC7-218ENST00000463732 DLC1Q96QB1 1528 aa23.31■■□□□ 1.32
HDAC7-218ENST00000463732 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
HDAC7-218ENST00000463732 CFAP70Q5T0N1 1121 aa23.3■■□□□ 1.32
HDAC7-218ENST00000463732 TMEM132EQ6IEE7 984 aa23.29■■□□□ 1.32
HDAC7-218ENST00000463732 KIAA1210Q9ULL0 1709 aa23.29■■□□□ 1.32
HDAC7-218ENST00000463732 STK26Q9P289 416 aa23.28■■□□□ 1.32
HDAC7-218ENST00000463732 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
HDAC7-218ENST00000463732 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.32
HDAC7-218ENST00000463732 KDM2AQ9Y2K7 1162 aa23.27■■□□□ 1.32
HDAC7-218ENST00000463732 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
HDAC7-218ENST00000463732 BRINP3Q76B58 766 aa23.25■■□□□ 1.31
HDAC7-218ENST00000463732 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms