RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RIMS2Q9UQ26 1411 aa19.45■□□□□ 0.7
R3HDM1-213ENST00000463230 CLTCL1P53675 1640 aa19.45■□□□□ 0.7
R3HDM1-213ENST00000463230 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
R3HDM1-213ENST00000463230 KIF1BO60333 1816 aa19.44■□□□□ 0.7
R3HDM1-213ENST00000463230 ZNF335Q9H4Z2 1342 aaPredicted RBP19.43■□□□□ 0.7
R3HDM1-213ENST00000463230 FBXO41Q8TF61 875 aa19.43■□□□□ 0.7
R3HDM1-213ENST00000463230 PLEKHG1Q9ULL1 1385 aa19.42■□□□□ 0.7
R3HDM1-213ENST00000463230 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
R3HDM1-213ENST00000463230 CHGAP10645 457 aaKnown RBP19.4■□□□□ 0.7
R3HDM1-213ENST00000463230 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
R3HDM1-213ENST00000463230 PPP1R15AO75807 674 aaPredicted RBP19.37■□□□□ 0.69
R3HDM1-213ENST00000463230 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
R3HDM1-213ENST00000463230 RPGRIP1LQ68CZ1 1315 aa19.34■□□□□ 0.69
R3HDM1-213ENST00000463230 NEXMIFQ5QGS0 1516 aa19.34■□□□□ 0.69
R3HDM1-213ENST00000463230 ILDR1Q86SU0 546 aaPredicted RBP19.33■□□□□ 0.69
R3HDM1-213ENST00000463230 STRCP1A6NGW2 1772 aa19.33■□□□□ 0.69
R3HDM1-213ENST00000463230 NWD1Q149M9 1564 aa19.33■□□□□ 0.68
R3HDM1-213ENST00000463230 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
R3HDM1-213ENST00000463230 TBX22Q9Y458 520 aa19.32■□□□□ 0.68
R3HDM1-213ENST00000463230 ZNF326Q5BKZ1 582 aaKnown RBP19.31■□□□□ 0.68
R3HDM1-213ENST00000463230 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
R3HDM1-213ENST00000463230 NKTRP30414 1462 aaKnown RBP19.3■□□□□ 0.68
R3HDM1-213ENST00000463230 KCNA6P17658 529 aa19.29■□□□□ 0.68
R3HDM1-213ENST00000463230 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
R3HDM1-213ENST00000463230 LRRC7Q96NW7 1537 aa19.29■□□□□ 0.68
R3HDM1-213ENST00000463230 FOXD1Q16676 465 aa19.29■□□□□ 0.68
R3HDM1-213ENST00000463230 BCANQ96GW7 911 aa19.29■□□□□ 0.68
R3HDM1-213ENST00000463230 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
R3HDM1-213ENST00000463230 PPLO60437 1756 aa19.28■□□□□ 0.68
R3HDM1-213ENST00000463230 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
R3HDM1-213ENST00000463230 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
R3HDM1-213ENST00000463230 NRXN3Q9Y4C0 1643 aa19.27■□□□□ 0.67
R3HDM1-213ENST00000463230 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
R3HDM1-213ENST00000463230 ANKRD30BQ9BXX2 1392 aa19.24■□□□□ 0.67
R3HDM1-213ENST00000463230 IFT172Q9UG01 1749 aa19.23■□□□□ 0.67
R3HDM1-213ENST00000463230 ADRA2BP18089 450 aa19.23■□□□□ 0.67
R3HDM1-213ENST00000463230 NUTM2DQ5VT03 806 aaPredicted RBP19.22■□□□□ 0.67
R3HDM1-213ENST00000463230 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
R3HDM1-213ENST00000463230 NCOA3Q9Y6Q9 1424 aa19.21■□□□□ 0.67
R3HDM1-213ENST00000463230 TOM1O60784 492 aa19.19■□□□□ 0.66
R3HDM1-213ENST00000463230 UBAP1LF5GYI3 381 aa19.19■□□□□ 0.66
R3HDM1-213ENST00000463230 XRN1Q8IZH2 1706 aaKnown RBP19.18■□□□□ 0.66
R3HDM1-213ENST00000463230 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
R3HDM1-213ENST00000463230 SETD1AO15047 1707 aaKnown RBP19.17■□□□□ 0.66
R3HDM1-213ENST00000463230 TMEM94Q12767 1356 aa19.17■□□□□ 0.66
R3HDM1-213ENST00000463230 PROSER2Q86WR7 435 aaPredicted RBP19.16■□□□□ 0.66
R3HDM1-213ENST00000463230 MYOM2P54296 1465 aa19.16■□□□□ 0.66
R3HDM1-213ENST00000463230 ALKQ9UM73 1620 aa19.16■□□□□ 0.66
R3HDM1-213ENST00000463230 KCNA4P22459 653 aa19.15■□□□□ 0.66
R3HDM1-213ENST00000463230 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
R3HDM1-213ENST00000463230 PTPRUQ92729 1446 aa19.14■□□□□ 0.65
R3HDM1-213ENST00000463230 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
R3HDM1-213ENST00000463230 NRXN1Q9ULB1 1477 aa19.13■□□□□ 0.65
R3HDM1-213ENST00000463230 METP08581 1390 aa19.12■□□□□ 0.65
R3HDM1-213ENST00000463230 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
R3HDM1-213ENST00000463230 AMOTL2Q9Y2J4 779 aa19.12■□□□□ 0.65
R3HDM1-213ENST00000463230 PIK3C2GO75747 1445 aa19.11■□□□□ 0.65
R3HDM1-213ENST00000463230 LAMC1P11047 1609 aa19.11■□□□□ 0.65
R3HDM1-213ENST00000463230 MSH6P52701 1360 aa19.11■□□□□ 0.65
R3HDM1-213ENST00000463230 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
R3HDM1-213ENST00000463230 ADGRF5Q8IZF2 1346 aa19.09■□□□□ 0.65
R3HDM1-213ENST00000463230 DCCP43146 1447 aa19.07■□□□□ 0.64
R3HDM1-213ENST00000463230 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
R3HDM1-213ENST00000463230 TECPR2O15040 1411 aa19.04■□□□□ 0.64
R3HDM1-213ENST00000463230 FAM135BQ49AJ0 1406 aa19.04■□□□□ 0.64
R3HDM1-213ENST00000463230 C19orf44Q9H6X5 657 aa19.04■□□□□ 0.64
R3HDM1-213ENST00000463230 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
R3HDM1-213ENST00000463230 C14orf93Q9H972 538 aaKnown RBP19.02■□□□□ 0.64
R3HDM1-213ENST00000463230 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
R3HDM1-213ENST00000463230 PIP4K2BP78356 416 aa19.02■□□□□ 0.64
R3HDM1-213ENST00000463230 ADGRL3Q9HAR2 1447 aa19.01■□□□□ 0.63
R3HDM1-213ENST00000463230 ASXL1Q8IXJ9 1541 aa19.01■□□□□ 0.63
R3HDM1-213ENST00000463230 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
R3HDM1-213ENST00000463230 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
R3HDM1-213ENST00000463230 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
R3HDM1-213ENST00000463230 DHX57Q6P158 1386 aaKnown RBP19■□□□□ 0.63
R3HDM1-213ENST00000463230 ABCC11Q96J66 1382 aa19■□□□□ 0.63
R3HDM1-213ENST00000463230 RBM33Q96EV2 1170 aaKnown RBP18.99■□□□□ 0.63
R3HDM1-213ENST00000463230 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
R3HDM1-213ENST00000463230 ATF3P18847 181 aa18.98■□□□□ 0.63
R3HDM1-213ENST00000463230 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
R3HDM1-213ENST00000463230 NALCNQ8IZF0 1738 aa18.97■□□□□ 0.63
R3HDM1-213ENST00000463230 SIRT1Q96EB6 747 aa18.97■□□□□ 0.63
R3HDM1-213ENST00000463230 YTHDC2Q9H6S0 1430 aaKnown RBP18.97■□□□□ 0.63
R3HDM1-213ENST00000463230 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
R3HDM1-213ENST00000463230 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
R3HDM1-213ENST00000463230 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
R3HDM1-213ENST00000463230 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
R3HDM1-213ENST00000463230 ADGRB1O14514 1584 aa18.94■□□□□ 0.62
R3HDM1-213ENST00000463230 HSPA1LP34931 641 aa18.94■□□□□ 0.62
R3HDM1-213ENST00000463230 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
R3HDM1-213ENST00000463230 CDC42BPGQ6DT37 1551 aa18.93■□□□□ 0.62
R3HDM1-213ENST00000463230 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
R3HDM1-213ENST00000463230 MST1RQ04912 1400 aa18.91■□□□□ 0.62
R3HDM1-213ENST00000463230 TMEM132EQ6IEE7 984 aa18.9■□□□□ 0.62
R3HDM1-213ENST00000463230 STK26Q9P289 416 aa18.89■□□□□ 0.61
R3HDM1-213ENST00000463230 AHDC1Q5TGY3 1603 aaPredicted RBP18.88■□□□□ 0.61
R3HDM1-213ENST00000463230 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
R3HDM1-213ENST00000463230 C1orf167Q5SNV9 1468 aa18.85■□□□□ 0.61
R3HDM1-213ENST00000463230 SIN3AQ96ST3 1273 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms