RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 TMEM131LA2VDJ0 1609 aa26.95■■□□□ 1.91
LINC00960-201ENST00000463183 SLC4A1APQ9BWU0 796 aaKnown RBP26.93■■□□□ 1.9
LINC00960-201ENST00000463183 STRCP1A6NGW2 1772 aa26.93■■□□□ 1.9
LINC00960-201ENST00000463183 SPHKAPQ2M3C7 1700 aa26.92■■□□□ 1.9
LINC00960-201ENST00000463183 HDGFP51858 240 aaKnown RBP26.91■■□□□ 1.9
LINC00960-201ENST00000463183 ZFYVE9O95405 1425 aa26.91■■□□□ 1.9
LINC00960-201ENST00000463183 PIP4K2BP78356 416 aa26.9■■□□□ 1.9
LINC00960-201ENST00000463183 ZNF326Q5BKZ1 582 aaKnown RBP26.9■■□□□ 1.9
LINC00960-201ENST00000463183 LRRC7Q96NW7 1537 aa26.87■■□□□ 1.89
LINC00960-201ENST00000463183 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.87■■□□□ 1.89
LINC00960-201ENST00000463183 TOM1O60784 492 aa26.86■■□□□ 1.89
LINC00960-201ENST00000463183 PLEKHG1Q9ULL1 1385 aa26.85■■□□□ 1.89
LINC00960-201ENST00000463183 FOXD1Q16676 465 aa26.85■■□□□ 1.89
LINC00960-201ENST00000463183 RBM33Q96EV2 1170 aaKnown RBP26.82■■□□□ 1.88
LINC00960-201ENST00000463183 CLTCL1P53675 1640 aa26.82■■□□□ 1.88
LINC00960-201ENST00000463183 TRPM2O94759 1503 aa26.81■■□□□ 1.88
LINC00960-201ENST00000463183 KCNA6P17658 529 aa26.81■■□□□ 1.88
LINC00960-201ENST00000463183 PROSER2Q86WR7 435 aaPredicted RBP26.78■■□□□ 1.88
LINC00960-201ENST00000463183 SETD5Q9C0A6 1442 aa26.77■■□□□ 1.88
LINC00960-201ENST00000463183 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
LINC00960-201ENST00000463183 TMEM94Q12767 1356 aa26.75■■□□□ 1.87
LINC00960-201ENST00000463183 ADAMTS13Q76LX8 1427 aa26.72■■□□□ 1.87
LINC00960-201ENST00000463183 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
LINC00960-201ENST00000463183 KIF1BO60333 1816 aa26.72■■□□□ 1.87
LINC00960-201ENST00000463183 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
LINC00960-201ENST00000463183 HSPA1LP34931 641 aa26.69■■□□□ 1.86
LINC00960-201ENST00000463183 ALKQ9UM73 1620 aa26.69■■□□□ 1.86
LINC00960-201ENST00000463183 XIRP1Q702N8 1843 aaKnown RBP26.69■■□□□ 1.86
LINC00960-201ENST00000463183 NWD1Q149M9 1564 aa26.69■■□□□ 1.86
LINC00960-201ENST00000463183 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
LINC00960-201ENST00000463183 NEXMIFQ5QGS0 1516 aa26.66■■□□□ 1.86
LINC00960-201ENST00000463183 CCDC144AA2RUR9 1427 aa26.66■■□□□ 1.86
LINC00960-201ENST00000463183 C14orf37Q86TY3 774 aa26.65■■□□□ 1.86
LINC00960-201ENST00000463183 DIP2AQ14689 1571 aa26.65■■□□□ 1.86
LINC00960-201ENST00000463183 CHD2O14647 1828 aaKnown RBP26.65■■□□□ 1.86
LINC00960-201ENST00000463183 RGL3Q3MIN7 710 aa26.63■■□□□ 1.85
LINC00960-201ENST00000463183 AMOTL2Q9Y2J4 779 aa26.63■■□□□ 1.85
LINC00960-201ENST00000463183 NRXN3Q9Y4C0 1643 aa26.61■■□□□ 1.85
LINC00960-201ENST00000463183 MSH6P52701 1360 aa26.6■■□□□ 1.85
LINC00960-201ENST00000463183 SETBP1Q9Y6X0 1596 aa26.59■■□□□ 1.85
LINC00960-201ENST00000463183 PIK3R4Q99570 1358 aa26.59■■□□□ 1.85
LINC00960-201ENST00000463183 DISP3Q9P2K9 1392 aa26.59■■□□□ 1.85
LINC00960-201ENST00000463183 PTPRUQ92729 1446 aa26.59■■□□□ 1.85
LINC00960-201ENST00000463183 ACIN1Q9UKV3 1341 aaKnown RBP26.58■■□□□ 1.85
LINC00960-201ENST00000463183 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
LINC00960-201ENST00000463183 METP08581 1390 aa26.57■■□□□ 1.84
LINC00960-201ENST00000463183 RPGRIP1LQ68CZ1 1315 aa26.56■■□□□ 1.84
LINC00960-201ENST00000463183 PPLO60437 1756 aa26.49■■□□□ 1.83
LINC00960-201ENST00000463183 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
LINC00960-201ENST00000463183 ADGRF5Q8IZF2 1346 aa26.47■■□□□ 1.83
LINC00960-201ENST00000463183 SLAIN2Q9P270 581 aa26.47■■□□□ 1.83
LINC00960-201ENST00000463183 ATF3P18847 181 aa26.46■■□□□ 1.83
LINC00960-201ENST00000463183 XRN1Q8IZH2 1706 aaKnown RBP26.46■■□□□ 1.83
LINC00960-201ENST00000463183 C19orf44Q9H6X5 657 aa26.45■■□□□ 1.83
LINC00960-201ENST00000463183 ROBO1Q9Y6N7 1651 aa26.45■■□□□ 1.82
LINC00960-201ENST00000463183 FAM135BQ49AJ0 1406 aa26.45■■□□□ 1.82
LINC00960-201ENST00000463183 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
LINC00960-201ENST00000463183 CADPS2Q86UW7 1296 aa26.42■■□□□ 1.82
LINC00960-201ENST00000463183 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.42■■□□□ 1.82
LINC00960-201ENST00000463183 ANKRD30BQ9BXX2 1392 aa26.41■■□□□ 1.82
LINC00960-201ENST00000463183 HRCP23327 699 aa26.39■■□□□ 1.82
LINC00960-201ENST00000463183 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.81
LINC00960-201ENST00000463183 STK26Q9P289 416 aa26.38■■□□□ 1.81
LINC00960-201ENST00000463183 IFT172Q9UG01 1749 aa26.37■■□□□ 1.81
LINC00960-201ENST00000463183 ROBO2Q9HCK4 1378 aa26.36■■□□□ 1.81
LINC00960-201ENST00000463183 MED1Q15648 1581 aaPredicted RBP26.35■■□□□ 1.81
LINC00960-201ENST00000463183 TMEM132EQ6IEE7 984 aa26.34■■□□□ 1.81
LINC00960-201ENST00000463183 PTCH1Q13635 1447 aa26.32■■□□□ 1.8
LINC00960-201ENST00000463183 ADGRL3Q9HAR2 1447 aa26.32■■□□□ 1.8
LINC00960-201ENST00000463183 PIK3C2GO75747 1445 aa26.31■■□□□ 1.8
LINC00960-201ENST00000463183 ILDR2Q71H61 639 aa26.31■■□□□ 1.8
LINC00960-201ENST00000463183 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
LINC00960-201ENST00000463183 KDM2AQ9Y2K7 1162 aa26.3■■□□□ 1.8
LINC00960-201ENST00000463183 NALCNQ8IZF0 1738 aa26.29■■□□□ 1.8
LINC00960-201ENST00000463183 PHLPP1O60346 1717 aa26.29■■□□□ 1.8
LINC00960-201ENST00000463183 DCCP43146 1447 aa26.29■■□□□ 1.8
LINC00960-201ENST00000463183 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
LINC00960-201ENST00000463183 BRINP3Q76B58 766 aa26.27■■□□□ 1.8
LINC00960-201ENST00000463183 DCAF11Q8TEB1 546 aa26.26■■□□□ 1.79
LINC00960-201ENST00000463183 MST1RQ04912 1400 aa26.26■■□□□ 1.79
LINC00960-201ENST00000463183 ASXL1Q8IXJ9 1541 aa26.25■■□□□ 1.79
LINC00960-201ENST00000463183 WAPLQ7Z5K2 1190 aa26.25■■□□□ 1.79
LINC00960-201ENST00000463183 MYOM2P54296 1465 aa26.24■■□□□ 1.79
LINC00960-201ENST00000463183 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
LINC00960-201ENST00000463183 C14orf93Q9H972 538 aaKnown RBP26.23■■□□□ 1.79
LINC00960-201ENST00000463183 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
LINC00960-201ENST00000463183 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.78
LINC00960-201ENST00000463183 PRAG1Q86YV5 1406 aa26.2■■□□□ 1.78
LINC00960-201ENST00000463183 DDX17Q92841 729 aaKnown RBP26.19■■□□□ 1.78
LINC00960-201ENST00000463183 JCADQ9P266 1359 aa26.19■■□□□ 1.78
LINC00960-201ENST00000463183 PLEKHH1Q9ULM0 1364 aa26.19■■□□□ 1.78
LINC00960-201ENST00000463183 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
LINC00960-201ENST00000463183 COL16A1Q07092 1604 aaPredicted RBP26.18■■□□□ 1.78
LINC00960-201ENST00000463183 NUTM2FA1L443 756 aa26.17■■□□□ 1.78
LINC00960-201ENST00000463183 DHX57Q6P158 1386 aaKnown RBP26.17■■□□□ 1.78
LINC00960-201ENST00000463183 AHDC1Q5TGY3 1603 aaPredicted RBP26.16■■□□□ 1.78
LINC00960-201ENST00000463183 C1orf167Q5SNV9 1468 aa26.16■■□□□ 1.78
LINC00960-201ENST00000463183 TECPR2O15040 1411 aa26.16■■□□□ 1.78
LINC00960-201ENST00000463183 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
LINC00960-201ENST00000463183 LAMC1P11047 1609 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms