RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-214ENST00000462983 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-214ENST00000462983 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
TRAPPC12-214ENST00000462983 RIMS2Q9UQ26 1411 aa13.54□□□□□ -0.24
TRAPPC12-214ENST00000462983 LTBP4Q8N2S1 1624 aa13.53□□□□□ -0.24
TRAPPC12-214ENST00000462983 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
TRAPPC12-214ENST00000462983 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-214ENST00000462983 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-214ENST00000462983 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
TRAPPC12-214ENST00000462983 PPP1R15AO75807 674 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC12-214ENST00000462983 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
TRAPPC12-214ENST00000462983 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
TRAPPC12-214ENST00000462983 BCANQ96GW7 911 aa13.51□□□□□ -0.25
TRAPPC12-214ENST00000462983 HDGFP51858 240 aaKnown RBP13.49□□□□□ -0.25
TRAPPC12-214ENST00000462983 CCDC144AA2RUR9 1427 aa13.48□□□□□ -0.25
TRAPPC12-214ENST00000462983 PPLO60437 1756 aa13.48□□□□□ -0.25
TRAPPC12-214ENST00000462983 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
TRAPPC12-214ENST00000462983 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAPPC12-214ENST00000462983 NEXMIFQ5QGS0 1516 aa13.47□□□□□ -0.25
TRAPPC12-214ENST00000462983 PLEKHG1Q9ULL1 1385 aa13.46□□□□□ -0.25
TRAPPC12-214ENST00000462983 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-214ENST00000462983 CPS1P31327 1500 aa13.45□□□□□ -0.26
TRAPPC12-214ENST00000462983 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-214ENST00000462983 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
TRAPPC12-214ENST00000462983 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
TRAPPC12-214ENST00000462983 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
TRAPPC12-214ENST00000462983 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 ADAMTS13Q76LX8 1427 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 IQSEC2Q5JU85 1478 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
TRAPPC12-214ENST00000462983 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
TRAPPC12-214ENST00000462983 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
TRAPPC12-214ENST00000462983 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
TRAPPC12-214ENST00000462983 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
TRAPPC12-214ENST00000462983 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
TRAPPC12-214ENST00000462983 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC12-214ENST00000462983 KCNA6P17658 529 aa13.38□□□□□ -0.27
TRAPPC12-214ENST00000462983 SETD1AO15047 1707 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-214ENST00000462983 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
TRAPPC12-214ENST00000462983 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
TRAPPC12-214ENST00000462983 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
TRAPPC12-214ENST00000462983 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC12-214ENST00000462983 ADGRF5Q8IZF2 1346 aa13.35□□□□□ -0.27
TRAPPC12-214ENST00000462983 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
TRAPPC12-214ENST00000462983 METP08581 1390 aa13.34□□□□□ -0.27
TRAPPC12-214ENST00000462983 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-214ENST00000462983 PTPRUQ92729 1446 aa13.34□□□□□ -0.27
TRAPPC12-214ENST00000462983 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
TRAPPC12-214ENST00000462983 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
TRAPPC12-214ENST00000462983 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
TRAPPC12-214ENST00000462983 SCAF1Q9H7N4 1312 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-214ENST00000462983 TOM1O60784 492 aa13.3□□□□□ -0.28
TRAPPC12-214ENST00000462983 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
TRAPPC12-214ENST00000462983 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-214ENST00000462983 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
TRAPPC12-214ENST00000462983 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
TRAPPC12-214ENST00000462983 MYOM2P54296 1465 aa13.29□□□□□ -0.28
TRAPPC12-214ENST00000462983 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
TRAPPC12-214ENST00000462983 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-214ENST00000462983 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
TRAPPC12-214ENST00000462983 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
TRAPPC12-214ENST00000462983 NRXN1Q9ULB1 1477 aa13.28□□□□□ -0.28
TRAPPC12-214ENST00000462983 LAMC1P11047 1609 aa13.28□□□□□ -0.28
TRAPPC12-214ENST00000462983 MSH6P52701 1360 aa13.26□□□□□ -0.29
TRAPPC12-214ENST00000462983 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
TRAPPC12-214ENST00000462983 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
TRAPPC12-214ENST00000462983 ASXL1Q8IXJ9 1541 aa13.26□□□□□ -0.29
TRAPPC12-214ENST00000462983 NALCNQ8IZF0 1738 aa13.26□□□□□ -0.29
TRAPPC12-214ENST00000462983 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
TRAPPC12-214ENST00000462983 SOCS7O14512 581 aa13.25□□□□□ -0.29
TRAPPC12-214ENST00000462983 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
TRAPPC12-214ENST00000462983 STK26Q9P289 416 aa13.25□□□□□ -0.29
TRAPPC12-214ENST00000462983 C14orf93Q9H972 538 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-214ENST00000462983 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
TRAPPC12-214ENST00000462983 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
TRAPPC12-214ENST00000462983 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
TRAPPC12-214ENST00000462983 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
TRAPPC12-214ENST00000462983 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-214ENST00000462983 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
TRAPPC12-214ENST00000462983 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-214ENST00000462983 ATF3P18847 181 aa13.2□□□□□ -0.3
TRAPPC12-214ENST00000462983 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
TRAPPC12-214ENST00000462983 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 SLAIN2Q9P270 581 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 ADGRL3Q9HAR2 1447 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 ADGRB1O14514 1584 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
TRAPPC12-214ENST00000462983 HSPA1LP34931 641 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 WAPLQ7Z5K2 1190 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 TECPR2O15040 1411 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
TRAPPC12-214ENST00000462983 PLEKHH1Q9ULM0 1364 aa13.17□□□□□ -0.3
TRAPPC12-214ENST00000462983 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms