RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CHGAP10645 457 aaKnown RBP19.93■□□□□ 0.78
C9orf3-210ENST00000462125 KCNA6P17658 529 aa19.93■□□□□ 0.78
C9orf3-210ENST00000462125 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
C9orf3-210ENST00000462125 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
C9orf3-210ENST00000462125 PLEKHG1Q9ULL1 1385 aa19.91■□□□□ 0.78
C9orf3-210ENST00000462125 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
C9orf3-210ENST00000462125 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
C9orf3-210ENST00000462125 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
C9orf3-210ENST00000462125 BCANQ96GW7 911 aa19.88■□□□□ 0.77
C9orf3-210ENST00000462125 PIP4K2BP78356 416 aa19.87■□□□□ 0.77
C9orf3-210ENST00000462125 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
C9orf3-210ENST00000462125 ALKQ9UM73 1620 aa19.85■□□□□ 0.77
C9orf3-210ENST00000462125 NUTM2DQ5VT03 806 aaPredicted RBP19.84■□□□□ 0.77
C9orf3-210ENST00000462125 SLC4A1APQ9BWU0 796 aaKnown RBP19.84■□□□□ 0.77
C9orf3-210ENST00000462125 PROSER2Q86WR7 435 aaPredicted RBP19.83■□□□□ 0.77
C9orf3-210ENST00000462125 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
C9orf3-210ENST00000462125 HSPA1LP34931 641 aa19.82■□□□□ 0.76
C9orf3-210ENST00000462125 ADAMTS13Q76LX8 1427 aa19.82■□□□□ 0.76
C9orf3-210ENST00000462125 SPHKAPQ2M3C7 1700 aa19.82■□□□□ 0.76
C9orf3-210ENST00000462125 TMEM94Q12767 1356 aa19.82■□□□□ 0.76
C9orf3-210ENST00000462125 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
C9orf3-210ENST00000462125 TRPM2O94759 1503 aa19.79■□□□□ 0.76
C9orf3-210ENST00000462125 PIK3R4Q99570 1358 aa19.79■□□□□ 0.76
C9orf3-210ENST00000462125 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
C9orf3-210ENST00000462125 NWD1Q149M9 1564 aa19.78■□□□□ 0.76
C9orf3-210ENST00000462125 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
C9orf3-210ENST00000462125 ZNF326Q5BKZ1 582 aaKnown RBP19.78■□□□□ 0.76
C9orf3-210ENST00000462125 MED1Q15648 1581 aaPredicted RBP19.78■□□□□ 0.76
C9orf3-210ENST00000462125 XIRP1Q702N8 1843 aaKnown RBP19.77■□□□□ 0.76
C9orf3-210ENST00000462125 RBM33Q96EV2 1170 aaKnown RBP19.77■□□□□ 0.76
C9orf3-210ENST00000462125 CHD2O14647 1828 aaKnown RBP19.75■□□□□ 0.75
C9orf3-210ENST00000462125 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
C9orf3-210ENST00000462125 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
C9orf3-210ENST00000462125 NCOA3Q9Y6Q9 1424 aa19.74■□□□□ 0.75
C9orf3-210ENST00000462125 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
C9orf3-210ENST00000462125 FOXD1Q16676 465 aa19.72■□□□□ 0.75
C9orf3-210ENST00000462125 FAM135BQ49AJ0 1406 aa19.72■□□□□ 0.75
C9orf3-210ENST00000462125 AMOTL2Q9Y2J4 779 aa19.72■□□□□ 0.75
C9orf3-210ENST00000462125 RPGRIP1LQ68CZ1 1315 aa19.72■□□□□ 0.75
C9orf3-210ENST00000462125 SETD5Q9C0A6 1442 aa19.71■□□□□ 0.75
C9orf3-210ENST00000462125 SETBP1Q9Y6X0 1596 aa19.7■□□□□ 0.74
C9orf3-210ENST00000462125 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
C9orf3-210ENST00000462125 MSH6P52701 1360 aa19.7■□□□□ 0.74
C9orf3-210ENST00000462125 PTPRUQ92729 1446 aa19.69■□□□□ 0.74
C9orf3-210ENST00000462125 NEXMIFQ5QGS0 1516 aa19.69■□□□□ 0.74
C9orf3-210ENST00000462125 KIF1BO60333 1816 aa19.67■□□□□ 0.74
C9orf3-210ENST00000462125 NRXN3Q9Y4C0 1643 aa19.67■□□□□ 0.74
C9orf3-210ENST00000462125 C19orf44Q9H6X5 657 aa19.67■□□□□ 0.74
C9orf3-210ENST00000462125 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
C9orf3-210ENST00000462125 METP08581 1390 aa19.67■□□□□ 0.74
C9orf3-210ENST00000462125 CCDC144AA2RUR9 1427 aa19.63■□□□□ 0.73
C9orf3-210ENST00000462125 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
C9orf3-210ENST00000462125 HRCP23327 699 aa19.63■□□□□ 0.73
C9orf3-210ENST00000462125 CADPS2Q86UW7 1296 aa19.62■□□□□ 0.73
C9orf3-210ENST00000462125 C14orf37Q86TY3 774 aa19.61■□□□□ 0.73
C9orf3-210ENST00000462125 SPATA31E1Q6ZUB1 1445 aa19.6■□□□□ 0.73
C9orf3-210ENST00000462125 ATF3P18847 181 aa19.59■□□□□ 0.73
C9orf3-210ENST00000462125 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
C9orf3-210ENST00000462125 XRN1Q8IZH2 1706 aaKnown RBP19.58■□□□□ 0.72
C9orf3-210ENST00000462125 ANKRD30BQ9BXX2 1392 aa19.56■□□□□ 0.72
C9orf3-210ENST00000462125 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
C9orf3-210ENST00000462125 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
C9orf3-210ENST00000462125 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.54■□□□□ 0.72
C9orf3-210ENST00000462125 DCCP43146 1447 aa19.54■□□□□ 0.72
C9orf3-210ENST00000462125 PPLO60437 1756 aa19.54■□□□□ 0.72
C9orf3-210ENST00000462125 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
C9orf3-210ENST00000462125 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
C9orf3-210ENST00000462125 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
C9orf3-210ENST00000462125 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
C9orf3-210ENST00000462125 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
C9orf3-210ENST00000462125 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
C9orf3-210ENST00000462125 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-210ENST00000462125 MST1RQ04912 1400 aa19.47■□□□□ 0.71
C9orf3-210ENST00000462125 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
C9orf3-210ENST00000462125 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
C9orf3-210ENST00000462125 JCADQ9P266 1359 aa19.44■□□□□ 0.7
C9orf3-210ENST00000462125 IFT172Q9UG01 1749 aa19.44■□□□□ 0.7
C9orf3-210ENST00000462125 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
C9orf3-210ENST00000462125 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
C9orf3-210ENST00000462125 RGS17Q9UGC6 210 aaPredicted RBP19.43■□□□□ 0.7
C9orf3-210ENST00000462125 LRPPRCP42704 1394 aaKnown RBP19.43■□□□□ 0.7
C9orf3-210ENST00000462125 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
C9orf3-210ENST00000462125 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
C9orf3-210ENST00000462125 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
C9orf3-210ENST00000462125 TECPR2O15040 1411 aa19.42■□□□□ 0.7
C9orf3-210ENST00000462125 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
C9orf3-210ENST00000462125 COL16A1Q07092 1604 aaPredicted RBP19.4■□□□□ 0.7
C9orf3-210ENST00000462125 STAC3Q96MF2 364 aa19.4■□□□□ 0.7
C9orf3-210ENST00000462125 STK26Q9P289 416 aa19.4■□□□□ 0.7
C9orf3-210ENST00000462125 MYOM2P54296 1465 aa19.4■□□□□ 0.7
C9orf3-210ENST00000462125 CFAP70Q5T0N1 1121 aa19.39■□□□□ 0.69
C9orf3-210ENST00000462125 C1orf167Q5SNV9 1468 aa19.39■□□□□ 0.69
C9orf3-210ENST00000462125 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
C9orf3-210ENST00000462125 SPATA31A6Q5VVP1 1343 aa19.38■□□□□ 0.69
C9orf3-210ENST00000462125 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
C9orf3-210ENST00000462125 ASXL1Q8IXJ9 1541 aa19.38■□□□□ 0.69
C9orf3-210ENST00000462125 YTHDC2Q9H6S0 1430 aaKnown RBP19.36■□□□□ 0.69
C9orf3-210ENST00000462125 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
C9orf3-210ENST00000462125 ORAI2Q96SN7 254 aa19.35■□□□□ 0.69
C9orf3-210ENST00000462125 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms