RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 RPRD2Q5VT52 1461 aaKnown RBP30.81■■■□□ 2.52
NR1H3-216ENST00000462051 ROBO1Q9Y6N7 1651 aa30.78■■■□□ 2.52
NR1H3-216ENST00000462051 HDGFP51858 240 aaKnown RBP30.78■■■□□ 2.52
NR1H3-216ENST00000462051 NKTRP30414 1462 aaKnown RBP30.76■■■□□ 2.52
NR1H3-216ENST00000462051 NWD1Q149M9 1564 aa30.76■■■□□ 2.52
NR1H3-216ENST00000462051 MYO5BQ9ULV0 1848 aa30.75■■■□□ 2.51
NR1H3-216ENST00000462051 ZFYVE9O95405 1425 aa30.75■■■□□ 2.51
NR1H3-216ENST00000462051 SLAIN2Q9P270 581 aa30.75■■■□□ 2.51
NR1H3-216ENST00000462051 MSH6P52701 1360 aa30.74■■■□□ 2.51
NR1H3-216ENST00000462051 PLEKHG1Q9ULL1 1385 aa30.74■■■□□ 2.51
NR1H3-216ENST00000462051 RIMS2Q9UQ26 1411 aa30.73■■■□□ 2.51
NR1H3-216ENST00000462051 PPP1R15AO75807 674 aaPredicted RBP30.72■■■□□ 2.51
NR1H3-216ENST00000462051 POTEAQ6S8J7 498 aa30.72■■■□□ 2.51
NR1H3-216ENST00000462051 CHD2O14647 1828 aaKnown RBP30.71■■■□□ 2.51
NR1H3-216ENST00000462051 TBX22Q9Y458 520 aa30.71■■■□□ 2.51
NR1H3-216ENST00000462051 TMEM131LA2VDJ0 1609 aa30.69■■■□□ 2.5
NR1H3-216ENST00000462051 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
NR1H3-216ENST00000462051 CHGAP10645 457 aaKnown RBP30.67■■■□□ 2.5
NR1H3-216ENST00000462051 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.67■■■□□ 2.5
NR1H3-216ENST00000462051 NUTM2DQ5VT03 806 aaPredicted RBP30.63■■■□□ 2.49
NR1H3-216ENST00000462051 NCOA3Q9Y6Q9 1424 aa30.61■■■□□ 2.49
NR1H3-216ENST00000462051 UNC13BO14795 1591 aa30.61■■■□□ 2.49
NR1H3-216ENST00000462051 PHLPP1O60346 1717 aa30.61■■■□□ 2.49
NR1H3-216ENST00000462051 E9PCH4 1651 aa30.59■■■□□ 2.49
NR1H3-216ENST00000462051 JCADQ9P266 1359 aa30.58■■■□□ 2.49
NR1H3-216ENST00000462051 ADAMTS13Q76LX8 1427 aa30.57■■■□□ 2.48
NR1H3-216ENST00000462051 ROCK1Q13464 1354 aa30.57■■■□□ 2.48
NR1H3-216ENST00000462051 C14orf37Q86TY3 774 aa30.57■■■□□ 2.48
NR1H3-216ENST00000462051 C19orf44Q9H6X5 657 aa30.55■■■□□ 2.48
NR1H3-216ENST00000462051 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
NR1H3-216ENST00000462051 CADPS2Q86UW7 1296 aa30.52■■■□□ 2.48
NR1H3-216ENST00000462051 NUP155O75694 1391 aa30.52■■■□□ 2.48
NR1H3-216ENST00000462051 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.48
NR1H3-216ENST00000462051 ATF3P18847 181 aa30.5■■■□□ 2.47
NR1H3-216ENST00000462051 COL16A1Q07092 1604 aaPredicted RBP30.49■■■□□ 2.47
NR1H3-216ENST00000462051 AMOTL2Q9Y2J4 779 aa30.49■■■□□ 2.47
NR1H3-216ENST00000462051 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.49■■■□□ 2.47
NR1H3-216ENST00000462051 DIP2AQ14689 1571 aa30.49■■■□□ 2.47
NR1H3-216ENST00000462051 ITGAEP38570 1179 aa30.47■■■□□ 2.47
NR1H3-216ENST00000462051 SPATA31A6Q5VVP1 1343 aa30.45■■■□□ 2.46
NR1H3-216ENST00000462051 PTPRUQ92729 1446 aa30.43■■■□□ 2.46
NR1H3-216ENST00000462051 TRPM2O94759 1503 aa30.42■■■□□ 2.46
NR1H3-216ENST00000462051 AHDC1Q5TGY3 1603 aaPredicted RBP30.39■■■□□ 2.46
NR1H3-216ENST00000462051 LRP6O75581 1613 aa30.38■■■□□ 2.45
NR1H3-216ENST00000462051 MEX3CQ5U5Q3 659 aaKnown RBP30.38■■■□□ 2.45
NR1H3-216ENST00000462051 BRINP3Q76B58 766 aa30.38■■■□□ 2.45
NR1H3-216ENST00000462051 ZNF772Q68DY9 489 aaPredicted RBP30.35■■■□□ 2.45
NR1H3-216ENST00000462051 PPARGC1BQ86YN6 1023 aaKnown RBP30.35■■■□□ 2.45
NR1H3-216ENST00000462051 SETD1AO15047 1707 aaKnown RBP30.34■■■□□ 2.45
NR1H3-216ENST00000462051 ZNF326Q5BKZ1 582 aaKnown RBP30.34■■■□□ 2.45
NR1H3-216ENST00000462051 SHPRHQ149N8 1683 aa30.32■■■□□ 2.44
NR1H3-216ENST00000462051 NRXN3Q9Y4C0 1643 aa30.31■■■□□ 2.44
NR1H3-216ENST00000462051 SETBP1Q9Y6X0 1596 aa30.3■■■□□ 2.44
NR1H3-216ENST00000462051 SPHKAPQ2M3C7 1700 aa30.3■■■□□ 2.44
NR1H3-216ENST00000462051 DCCP43146 1447 aa30.3■■■□□ 2.44
NR1H3-216ENST00000462051 METP08581 1390 aa30.29■■■□□ 2.44
NR1H3-216ENST00000462051 NUTM2BA6NNL0 878 aaPredicted RBP30.28■■■□□ 2.44
NR1H3-216ENST00000462051 NUTM2EB1AL46 878 aaPredicted RBP30.28■■■□□ 2.44
NR1H3-216ENST00000462051 NUTM2AQ8IVF1 878 aaPredicted RBP30.28■■■□□ 2.44
NR1H3-216ENST00000462051 XRN1Q8IZH2 1706 aaKnown RBP30.27■■■□□ 2.44
NR1H3-216ENST00000462051 TRIM52Q96A61 297 aa30.25■■■□□ 2.43
NR1H3-216ENST00000462051 MST1RQ04912 1400 aa30.23■■■□□ 2.43
NR1H3-216ENST00000462051 RXRBP28702 533 aa30.23■■■□□ 2.43
NR1H3-216ENST00000462051 ASXL1Q8IXJ9 1541 aa30.22■■■□□ 2.43
NR1H3-216ENST00000462051 UPF1Q92900 1129 aaKnown RBP eCLIP30.22■■■□□ 2.43
NR1H3-216ENST00000462051 SETD5Q9C0A6 1442 aa30.22■■■□□ 2.43
NR1H3-216ENST00000462051 LRRC59Q96AG4 307 aaKnown RBP30.21■■■□□ 2.43
NR1H3-216ENST00000462051 DDX17Q92841 729 aaKnown RBP30.17■■■□□ 2.42
NR1H3-216ENST00000462051 CLTCL1P53675 1640 aa30.16■■■□□ 2.42
NR1H3-216ENST00000462051 NHSL1Q5SYE7 1610 aa30.16■■■□□ 2.42
NR1H3-216ENST00000462051 AFF2P51816 1311 aa30.16■■■□□ 2.42
NR1H3-216ENST00000462051 NEXMIFQ5QGS0 1516 aa30.16■■■□□ 2.42
NR1H3-216ENST00000462051 ADGRL3Q9HAR2 1447 aa30.15■■■□□ 2.42
NR1H3-216ENST00000462051 KIF1BO60333 1816 aa30.12■■■□□ 2.41
NR1H3-216ENST00000462051 VGFO15240 615 aaPredicted RBP30.11■■■□□ 2.41
NR1H3-216ENST00000462051 NAIPQ13075 1403 aa30.09■■■□□ 2.41
NR1H3-216ENST00000462051 NALCNQ8IZF0 1738 aa30.09■■■□□ 2.41
NR1H3-216ENST00000462051 CDK12Q9NYV4 1490 aaPredicted RBP30.08■■■□□ 2.41
NR1H3-216ENST00000462051 PNPLA6Q8IY17 1366 aa30.08■■■□□ 2.41
NR1H3-216ENST00000462051 C8orf37Q96NL8 207 aa30.08■■■□□ 2.41
NR1H3-216ENST00000462051 QTRT2Q9H974 415 aaKnown RBP30.07■■■□□ 2.4
NR1H3-216ENST00000462051 C1orf167Q5SNV9 1468 aa30.06■■■□□ 2.4
NR1H3-216ENST00000462051 RRBP1Q9P2E9 1410 aaKnown RBP30.05■■■□□ 2.4
NR1H3-216ENST00000462051 ROBO2Q9HCK4 1378 aa30.03■■■□□ 2.4
NR1H3-216ENST00000462051 RPGRIP1LQ68CZ1 1315 aa30.02■■■□□ 2.4
NR1H3-216ENST00000462051 ORAI2Q96SN7 254 aa30.02■■■□□ 2.4
NR1H3-216ENST00000462051 RBM6P78332 1123 aaKnown RBP30.01■■■□□ 2.39
NR1H3-216ENST00000462051 NGLY1Q96IV0 654 aa30■■■□□ 2.39
NR1H3-216ENST00000462051 PTCH1Q13635 1447 aa29.99■■■□□ 2.39
NR1H3-216ENST00000462051 ADAMTS2O95450 1211 aa29.99■■■□□ 2.39
NR1H3-216ENST00000462051 SOS2Q07890 1332 aaPredicted RBP29.98■■■□□ 2.39
NR1H3-216ENST00000462051 SLC4A1APQ9BWU0 796 aaKnown RBP29.98■■■□□ 2.39
NR1H3-216ENST00000462051 LAMC1P11047 1609 aa29.96■■■□□ 2.39
NR1H3-216ENST00000462051 RGS12O14924 1447 aa29.92■■■□□ 2.38
NR1H3-216ENST00000462051 PRAG1Q86YV5 1406 aa29.92■■■□□ 2.38
NR1H3-216ENST00000462051 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
NR1H3-216ENST00000462051 PPLO60437 1756 aa29.9■■■□□ 2.38
NR1H3-216ENST00000462051 USP21Q9UK80 565 aa29.88■■■□□ 2.37
NR1H3-216ENST00000462051 FOXD1Q16676 465 aa29.86■■■□□ 2.37
NR1H3-216ENST00000462051 FNBP4Q8N3X1 1017 aaPredicted RBP29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms