RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 RIMS2Q9UQ26 1411 aa15.17■□□□□ 0.02
SPTAN1-204ENST00000461855 PLEKHG1Q9ULL1 1385 aa15.17■□□□□ 0.02
SPTAN1-204ENST00000461855 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPTAN1-204ENST00000461855 MYO5BQ9ULV0 1848 aa15.17■□□□□ 0.02
SPTAN1-204ENST00000461855 CPS1P31327 1500 aa15.17■□□□□ 0.02
SPTAN1-204ENST00000461855 CLTCL1P53675 1640 aa15.15■□□□□ 0.02
SPTAN1-204ENST00000461855 CHGAP10645 457 aaKnown RBP15.13■□□□□ 0.01
SPTAN1-204ENST00000461855 FOXD1Q16676 465 aa15.12■□□□□ 0.01
SPTAN1-204ENST00000461855 TBX22Q9Y458 520 aa15.12■□□□□ 0.01
SPTAN1-204ENST00000461855 ADAMTS13Q76LX8 1427 aa15.11■□□□□ 0.01
SPTAN1-204ENST00000461855 STRCP1A6NGW2 1772 aa15.11■□□□□ 0.01
SPTAN1-204ENST00000461855 KCNA6P17658 529 aa15.1■□□□□ 0.01
SPTAN1-204ENST00000461855 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
SPTAN1-204ENST00000461855 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
SPTAN1-204ENST00000461855 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
SPTAN1-204ENST00000461855 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
SPTAN1-204ENST00000461855 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0
SPTAN1-204ENST00000461855 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0
SPTAN1-204ENST00000461855 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
SPTAN1-204ENST00000461855 PIK3R4Q99570 1358 aa15.07■□□□□ 0
SPTAN1-204ENST00000461855 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
SPTAN1-204ENST00000461855 NWD1Q149M9 1564 aa15.07■□□□□ 0
SPTAN1-204ENST00000461855 DIP2AQ14689 1571 aa15.06■□□□□ 0
SPTAN1-204ENST00000461855 SETBP1Q9Y6X0 1596 aa15.06■□□□□ 0
SPTAN1-204ENST00000461855 KIF1BO60333 1816 aa15.06■□□□□ 0
SPTAN1-204ENST00000461855 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
SPTAN1-204ENST00000461855 ANKRD30BQ9BXX2 1392 aa15.05■□□□□ -0
SPTAN1-204ENST00000461855 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
SPTAN1-204ENST00000461855 VGFO15240 615 aaPredicted RBP15.04■□□□□ -0
SPTAN1-204ENST00000461855 NKTRP30414 1462 aaKnown RBP15.03■□□□□ -0
SPTAN1-204ENST00000461855 CHD2O14647 1828 aaKnown RBP15.02■□□□□ -0
SPTAN1-204ENST00000461855 BCANQ96GW7 911 aa15.02■□□□□ -0
SPTAN1-204ENST00000461855 ALKQ9UM73 1620 aa15.02□□□□□ -0.01
SPTAN1-204ENST00000461855 UBAP1LF5GYI3 381 aa15.01□□□□□ -0.01
SPTAN1-204ENST00000461855 PTPRUQ92729 1446 aa15□□□□□ -0.01
SPTAN1-204ENST00000461855 TOM1O60784 492 aa15□□□□□ -0.01
SPTAN1-204ENST00000461855 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
SPTAN1-204ENST00000461855 TMEM94Q12767 1356 aa14.99□□□□□ -0.01
SPTAN1-204ENST00000461855 XIRP1Q702N8 1843 aaKnown RBP14.99□□□□□ -0.01
SPTAN1-204ENST00000461855 METP08581 1390 aa14.98□□□□□ -0.01
SPTAN1-204ENST00000461855 PPLO60437 1756 aa14.98□□□□□ -0.01
SPTAN1-204ENST00000461855 PROSER2Q86WR7 435 aaPredicted RBP14.98□□□□□ -0.01
SPTAN1-204ENST00000461855 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
SPTAN1-204ENST00000461855 AMOTL2Q9Y2J4 779 aa14.97□□□□□ -0.01
SPTAN1-204ENST00000461855 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
SPTAN1-204ENST00000461855 RGL3Q3MIN7 710 aa14.96□□□□□ -0.01
SPTAN1-204ENST00000461855 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
SPTAN1-204ENST00000461855 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
SPTAN1-204ENST00000461855 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
SPTAN1-204ENST00000461855 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
SPTAN1-204ENST00000461855 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
SPTAN1-204ENST00000461855 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
SPTAN1-204ENST00000461855 PIK3C2GO75747 1445 aa14.92□□□□□ -0.02
SPTAN1-204ENST00000461855 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
SPTAN1-204ENST00000461855 STAC3Q96MF2 364 aa14.92□□□□□ -0.02
SPTAN1-204ENST00000461855 MYOM2P54296 1465 aa14.92□□□□□ -0.02
SPTAN1-204ENST00000461855 PTCH1Q13635 1447 aa14.9□□□□□ -0.02
SPTAN1-204ENST00000461855 FAM135BQ49AJ0 1406 aa14.9□□□□□ -0.02
SPTAN1-204ENST00000461855 MSH6P52701 1360 aa14.89□□□□□ -0.03
SPTAN1-204ENST00000461855 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
SPTAN1-204ENST00000461855 C19orf44Q9H6X5 657 aa14.89□□□□□ -0.03
SPTAN1-204ENST00000461855 C14orf93Q9H972 538 aaKnown RBP14.89□□□□□ -0.03
SPTAN1-204ENST00000461855 PIP4K2BP78356 416 aa14.88□□□□□ -0.03
SPTAN1-204ENST00000461855 TECPR2O15040 1411 aa14.87□□□□□ -0.03
SPTAN1-204ENST00000461855 ABCC11Q96J66 1382 aa14.86□□□□□ -0.03
SPTAN1-204ENST00000461855 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
SPTAN1-204ENST00000461855 DCCP43146 1447 aa14.86□□□□□ -0.03
SPTAN1-204ENST00000461855 SLAIN2Q9P270 581 aa14.86□□□□□ -0.03
SPTAN1-204ENST00000461855 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
SPTAN1-204ENST00000461855 LRPPRCP42704 1394 aaKnown RBP14.85□□□□□ -0.03
SPTAN1-204ENST00000461855 HSPA1LP34931 641 aa14.85□□□□□ -0.03
SPTAN1-204ENST00000461855 CADPS2Q86UW7 1296 aa14.85□□□□□ -0.03
SPTAN1-204ENST00000461855 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
SPTAN1-204ENST00000461855 ADGRL3Q9HAR2 1447 aa14.83□□□□□ -0.03
SPTAN1-204ENST00000461855 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.83□□□□□ -0.03
SPTAN1-204ENST00000461855 CFAP70Q5T0N1 1121 aa14.83□□□□□ -0.04
SPTAN1-204ENST00000461855 DCAF11Q8TEB1 546 aa14.83□□□□□ -0.04
SPTAN1-204ENST00000461855 SCAF1Q9H7N4 1312 aaKnown RBP14.82□□□□□ -0.04
SPTAN1-204ENST00000461855 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
SPTAN1-204ENST00000461855 LAMC1P11047 1609 aa14.81□□□□□ -0.04
SPTAN1-204ENST00000461855 ATF3P18847 181 aa14.81□□□□□ -0.04
SPTAN1-204ENST00000461855 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
SPTAN1-204ENST00000461855 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
SPTAN1-204ENST00000461855 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
SPTAN1-204ENST00000461855 MST1RQ04912 1400 aa14.79□□□□□ -0.04
SPTAN1-204ENST00000461855 KNDC1Q76NI1 1749 aa14.79□□□□□ -0.04
SPTAN1-204ENST00000461855 KDM2AQ9Y2K7 1162 aa14.79□□□□□ -0.04
SPTAN1-204ENST00000461855 ROBO1Q9Y6N7 1651 aa14.77□□□□□ -0.04
SPTAN1-204ENST00000461855 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
SPTAN1-204ENST00000461855 NALCNQ8IZF0 1738 aa14.77□□□□□ -0.05
SPTAN1-204ENST00000461855 WAPLQ7Z5K2 1190 aa14.76□□□□□ -0.05
SPTAN1-204ENST00000461855 STK26Q9P289 416 aa14.76□□□□□ -0.05
SPTAN1-204ENST00000461855 DLC1Q96QB1 1528 aa14.76□□□□□ -0.05
SPTAN1-204ENST00000461855 PLEKHH1Q9ULM0 1364 aa14.75□□□□□ -0.05
SPTAN1-204ENST00000461855 BRINP3Q76B58 766 aa14.75□□□□□ -0.05
SPTAN1-204ENST00000461855 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
SPTAN1-204ENST00000461855 C1orf167Q5SNV9 1468 aa14.73□□□□□ -0.05
SPTAN1-204ENST00000461855 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
SPTAN1-204ENST00000461855 AHDC1Q5TGY3 1603 aaPredicted RBP14.72□□□□□ -0.05
SPTAN1-204ENST00000461855 KIAA1210Q9ULL0 1709 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms