RNA–Protein interactions for RNA: ENST00000461426.1

SIGMAR1-204, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 939 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-204ENST00000461426 PPP1R15AO75807 674 aaPredicted RBP39.3■■■■□ 3.88
SIGMAR1-204ENST00000461426 LTBP4Q8N2S1 1624 aa39.29■■■■□ 3.88
SIGMAR1-204ENST00000461426 ZNF326Q5BKZ1 582 aaKnown RBP39.27■■■■□ 3.88
SIGMAR1-204ENST00000461426 MYO5BQ9ULV0 1848 aa39.27■■■■□ 3.88
SIGMAR1-204ENST00000461426 CLTCL1P53675 1640 aa39.26■■■■□ 3.88
SIGMAR1-204ENST00000461426 BCANQ96GW7 911 aa39.24■■■■□ 3.87
SIGMAR1-204ENST00000461426 PLEKHG1Q9ULL1 1385 aa39.22■■■■□ 3.87
SIGMAR1-204ENST00000461426 TRIM26Q12899 539 aaPredicted RBP39.21■■■■□ 3.87
SIGMAR1-204ENST00000461426 CCDC144AA2RUR9 1427 aa39.2■■■■□ 3.87
SIGMAR1-204ENST00000461426 NUTM2DQ5VT03 806 aaPredicted RBP39.19■■■■□ 3.86
SIGMAR1-204ENST00000461426 SLC26A8Q96RN1 970 aa39.18■■■■□ 3.86
SIGMAR1-204ENST00000461426 FBXO41Q8TF61 875 aa39.15■■■■□ 3.86
SIGMAR1-204ENST00000461426 KIF1BO60333 1816 aa39.14■■■■□ 3.86
SIGMAR1-204ENST00000461426 RPGRIP1LQ68CZ1 1315 aa39.14■■■■□ 3.86
SIGMAR1-204ENST00000461426 CPS1P31327 1500 aa39.12■■■■□ 3.85
SIGMAR1-204ENST00000461426 TBX22Q9Y458 520 aa39.11■■■■□ 3.85
SIGMAR1-204ENST00000461426 IQSEC2Q5JU85 1478 aa39.1■■■■□ 3.85
SIGMAR1-204ENST00000461426 SENP3Q9H4L4 574 aaPredicted RBP39.09■■■■□ 3.85
SIGMAR1-204ENST00000461426 VGFO15240 615 aaPredicted RBP39.07■■■■□ 3.85
SIGMAR1-204ENST00000461426 ILDR1Q86SU0 546 aaPredicted RBP39.06■■■■□ 3.84
SIGMAR1-204ENST00000461426 KCNA6P17658 529 aa39.05■■■■□ 3.84
SIGMAR1-204ENST00000461426 ANKRD30BQ9BXX2 1392 aa39.05■■■■□ 3.84
SIGMAR1-204ENST00000461426 NEXMIFQ5QGS0 1516 aa39.02■■■■□ 3.84
SIGMAR1-204ENST00000461426 SPATA31E1Q6ZUB1 1445 aa39.01■■■■□ 3.84
SIGMAR1-204ENST00000461426 RGL3Q3MIN7 710 aa39.01■■■■□ 3.84
SIGMAR1-204ENST00000461426 ADAMTS13Q76LX8 1427 aa39■■■■□ 3.83
SIGMAR1-204ENST00000461426 PIK3R4Q99570 1358 aa38.95■■■■□ 3.83
SIGMAR1-204ENST00000461426 STRCP1A6NGW2 1772 aa38.93■■■■□ 3.82
SIGMAR1-204ENST00000461426 DIP2AQ14689 1571 aa38.93■■■■□ 3.82
SIGMAR1-204ENST00000461426 LRRC7Q96NW7 1537 aa38.92■■■■□ 3.82
SIGMAR1-204ENST00000461426 SETBP1Q9Y6X0 1596 aa38.91■■■■□ 3.82
SIGMAR1-204ENST00000461426 PROSER2Q86WR7 435 aaPredicted RBP38.87■■■■□ 3.81
SIGMAR1-204ENST00000461426 UBAP1LF5GYI3 381 aa38.85■■■■□ 3.81
SIGMAR1-204ENST00000461426 PPLO60437 1756 aa38.83■■■■□ 3.81
SIGMAR1-204ENST00000461426 NWD1Q149M9 1564 aa38.82■■■■□ 3.81
SIGMAR1-204ENST00000461426 NRXN3Q9Y4C0 1643 aa38.82■■■■□ 3.81
SIGMAR1-204ENST00000461426 NKTRP30414 1462 aaKnown RBP38.82■■■■□ 3.81
SIGMAR1-204ENST00000461426 AMOTL2Q9Y2J4 779 aa38.81■■■■□ 3.8
SIGMAR1-204ENST00000461426 ADGRF5Q8IZF2 1346 aa38.81■■■■□ 3.8
SIGMAR1-204ENST00000461426 CHD2O14647 1828 aaKnown RBP38.8■■■■□ 3.8
SIGMAR1-204ENST00000461426 TOM1O60784 492 aa38.8■■■■□ 3.8
SIGMAR1-204ENST00000461426 TMEM94Q12767 1356 aa38.79■■■■□ 3.8
SIGMAR1-204ENST00000461426 METP08581 1390 aa38.78■■■■□ 3.8
SIGMAR1-204ENST00000461426 PTPRUQ92729 1446 aa38.74■■■■□ 3.79
SIGMAR1-204ENST00000461426 STAC3Q96MF2 364 aa38.72■■■■□ 3.79
SIGMAR1-204ENST00000461426 RBM33Q96EV2 1170 aaKnown RBP38.71■■■■□ 3.79
SIGMAR1-204ENST00000461426 ALKQ9UM73 1620 aa38.71■■■■□ 3.79
SIGMAR1-204ENST00000461426 IFT172Q9UG01 1749 aa38.69■■■■□ 3.78
SIGMAR1-204ENST00000461426 NCOA3Q9Y6Q9 1424 aa38.68■■■■□ 3.78
SIGMAR1-204ENST00000461426 MYOM2P54296 1465 aa38.66■■■■□ 3.78
SIGMAR1-204ENST00000461426 PIK3C2GO75747 1445 aa38.65■■■■□ 3.78
SIGMAR1-204ENST00000461426 DCAF11Q8TEB1 546 aa38.65■■■■□ 3.78
SIGMAR1-204ENST00000461426 DHX57Q6P158 1386 aaKnown RBP38.65■■■■□ 3.78
SIGMAR1-204ENST00000461426 XIRP1Q702N8 1843 aaKnown RBP38.62■■■■□ 3.77
SIGMAR1-204ENST00000461426 C14orf93Q9H972 538 aaKnown RBP38.62■■■■□ 3.77
SIGMAR1-204ENST00000461426 NRXN1Q9ULB1 1477 aa38.61■■■■□ 3.77
SIGMAR1-204ENST00000461426 MSH6P52701 1360 aa38.61■■■■□ 3.77
SIGMAR1-204ENST00000461426 KDM2AQ9Y2K7 1162 aa38.61■■■■□ 3.77
SIGMAR1-204ENST00000461426 PIP4K2BP78356 416 aa38.6■■■■□ 3.77
SIGMAR1-204ENST00000461426 C14orf37Q86TY3 774 aa38.6■■■■□ 3.77
SIGMAR1-204ENST00000461426 XRN1Q8IZH2 1706 aaKnown RBP38.58■■■■□ 3.77
SIGMAR1-204ENST00000461426 SETD1AO15047 1707 aaKnown RBP38.58■■■■□ 3.77
SIGMAR1-204ENST00000461426 C19orf44Q9H6X5 657 aa38.57■■■■□ 3.76
SIGMAR1-204ENST00000461426 SCAF1Q9H7N4 1312 aaKnown RBP38.57■■■■□ 3.76
SIGMAR1-204ENST00000461426 PCGF6Q9BYE7 350 aa38.55■■■■□ 3.76
SIGMAR1-204ENST00000461426 CFAP70Q5T0N1 1121 aa38.54■■■■□ 3.76
SIGMAR1-204ENST00000461426 SIN3AQ96ST3 1273 aa38.53■■■■□ 3.76
SIGMAR1-204ENST00000461426 TMEM132EQ6IEE7 984 aa38.52■■■■□ 3.76
SIGMAR1-204ENST00000461426 PRAG1Q86YV5 1406 aa38.5■■■■□ 3.75
SIGMAR1-204ENST00000461426 PTCH1Q13635 1447 aa38.49■■■■□ 3.75
SIGMAR1-204ENST00000461426 LRPPRCP42704 1394 aaKnown RBP38.48■■■■□ 3.75
SIGMAR1-204ENST00000461426 ROBO2Q9HCK4 1378 aa38.47■■■■□ 3.75
SIGMAR1-204ENST00000461426 ATF3P18847 181 aa38.47■■■■□ 3.75
SIGMAR1-204ENST00000461426 NEUROD1Q13562 356 aa38.47■■■■□ 3.75
SIGMAR1-204ENST00000461426 CADPS2Q86UW7 1296 aa38.47■■■■□ 3.75
SIGMAR1-204ENST00000461426 STK26Q9P289 416 aa38.47■■■■□ 3.75
SIGMAR1-204ENST00000461426 ABCC11Q96J66 1382 aa38.46■■■■□ 3.75
SIGMAR1-204ENST00000461426 SLAIN2Q9P270 581 aa38.45■■■■□ 3.75
SIGMAR1-204ENST00000461426 YTHDC2Q9H6S0 1430 aaKnown RBP38.41■■■■□ 3.74
SIGMAR1-204ENST00000461426 LAMC1P11047 1609 aa38.41■■■■□ 3.74
SIGMAR1-204ENST00000461426 TECPR2O15040 1411 aa38.4■■■■□ 3.74
SIGMAR1-204ENST00000461426 L3MBTL2Q969R5 705 aa38.4■■■■□ 3.74
SIGMAR1-204ENST00000461426 SIRT1Q96EB6 747 aa38.4■■■■□ 3.74
SIGMAR1-204ENST00000461426 FAM135BQ49AJ0 1406 aa38.39■■■■□ 3.74
SIGMAR1-204ENST00000461426 ASXL1Q8IXJ9 1541 aa38.39■■■■□ 3.74
SIGMAR1-204ENST00000461426 DCCP43146 1447 aa38.38■■■■□ 3.73
SIGMAR1-204ENST00000461426 ADGRL3Q9HAR2 1447 aa38.37■■■■□ 3.73
SIGMAR1-204ENST00000461426 HSPA1LP34931 641 aa38.35■■■■□ 3.73
SIGMAR1-204ENST00000461426 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.35■■■■□ 3.73
SIGMAR1-204ENST00000461426 WAPLQ7Z5K2 1190 aa38.32■■■■□ 3.72
SIGMAR1-204ENST00000461426 ADGRB1O14514 1584 aa38.27■■■■□ 3.72
SIGMAR1-204ENST00000461426 KNDC1Q76NI1 1749 aa38.25■■■■□ 3.71
SIGMAR1-204ENST00000461426 PLEKHH1Q9ULM0 1364 aa38.22■■■■□ 3.71
SIGMAR1-204ENST00000461426 TRAK1Q9UPV9 953 aa38.22■■■■□ 3.71
SIGMAR1-204ENST00000461426 PRAM1Q96QH2 718 aa38.21■■■■□ 3.71
SIGMAR1-204ENST00000461426 POGKQ9P215 609 aa38.21■■■■□ 3.71
SIGMAR1-204ENST00000461426 NALCNQ8IZF0 1738 aa38.21■■■■□ 3.71
SIGMAR1-204ENST00000461426 DLC1Q96QB1 1528 aa38.19■■■■□ 3.7
SIGMAR1-204ENST00000461426 MST1RQ04912 1400 aa38.19■■■■□ 3.7
SIGMAR1-204ENST00000461426 ROBO1Q9Y6N7 1651 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms