RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-212ENST00000461239 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
ECHDC1-212ENST00000461239 REPIN1Q9BWE0 567 aaKnown RBP13.29□□□□□ -0.28
ECHDC1-212ENST00000461239 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
ECHDC1-212ENST00000461239 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
ECHDC1-212ENST00000461239 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
ECHDC1-212ENST00000461239 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
ECHDC1-212ENST00000461239 GIGYF2Q6Y7W6 1299 aaKnown RBP13.28□□□□□ -0.28
ECHDC1-212ENST00000461239 FOSBP53539 338 aa13.27□□□□□ -0.29
ECHDC1-212ENST00000461239 FAM9AQ8IZU1 332 aaPredicted RBP13.27□□□□□ -0.29
ECHDC1-212ENST00000461239 EEA1Q15075 1411 aa13.26□□□□□ -0.29
ECHDC1-212ENST00000461239 TMUB1Q9BVT8 246 aa13.26□□□□□ -0.29
ECHDC1-212ENST00000461239 ERCC6L2Q5T890 1561 aa13.25□□□□□ -0.29
ECHDC1-212ENST00000461239 MS4A1P11836 297 aa13.25□□□□□ -0.29
ECHDC1-212ENST00000461239 PHOX2BQ99453 314 aa13.25□□□□□ -0.29
ECHDC1-212ENST00000461239 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
ECHDC1-212ENST00000461239 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
ECHDC1-212ENST00000461239 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
ECHDC1-212ENST00000461239 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
ECHDC1-212ENST00000461239 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-212ENST00000461239 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
ECHDC1-212ENST00000461239 ZDHHC16Q969W1 377 aa13.2□□□□□ -0.3
ECHDC1-212ENST00000461239 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
ECHDC1-212ENST00000461239 NUDT7P0C024 238 aa13.19□□□□□ -0.3
ECHDC1-212ENST00000461239 CLCN1P35523 988 aa13.19□□□□□ -0.3
ECHDC1-212ENST00000461239 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
ECHDC1-212ENST00000461239 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.31e-13■■■■□ 24.3
ECHDC1-212ENST00000461239 PRG4Q92954 1404 aaPredicted RBP13.19□□□□□ -0.3
ECHDC1-212ENST00000461239 ST18O60284 1047 aa13.18□□□□□ -0.3
ECHDC1-212ENST00000461239 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-212ENST00000461239 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
ECHDC1-212ENST00000461239 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
ECHDC1-212ENST00000461239 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
ECHDC1-212ENST00000461239 ARSIQ5FYB1 569 aa13.17□□□□□ -0.3
ECHDC1-212ENST00000461239 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
ECHDC1-212ENST00000461239 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
ECHDC1-212ENST00000461239 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
ECHDC1-212ENST00000461239 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
ECHDC1-212ENST00000461239 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
ECHDC1-212ENST00000461239 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
ECHDC1-212ENST00000461239 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
ECHDC1-212ENST00000461239 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
ECHDC1-212ENST00000461239 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
ECHDC1-212ENST00000461239 ARXQ96QS3 562 aa13.15□□□□□ -0.3
ECHDC1-212ENST00000461239 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
ECHDC1-212ENST00000461239 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
ECHDC1-212ENST00000461239 KIF21BO75037 1637 aa13.14□□□□□ -0.31
ECHDC1-212ENST00000461239 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
ECHDC1-212ENST00000461239 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
ECHDC1-212ENST00000461239 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
ECHDC1-212ENST00000461239 OATP04181 439 aa13.12□□□□□ -0.31
ECHDC1-212ENST00000461239 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
ECHDC1-212ENST00000461239 RIMBP2O15034 1052 aa13.11□□□□□ -0.31
ECHDC1-212ENST00000461239 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
ECHDC1-212ENST00000461239 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
ECHDC1-212ENST00000461239 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
ECHDC1-212ENST00000461239 NLRP7Q8WX94 980 aa13.1□□□□□ -0.31
ECHDC1-212ENST00000461239 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
ECHDC1-212ENST00000461239 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
ECHDC1-212ENST00000461239 PRSS12P56730 875 aa13.08□□□□□ -0.32
ECHDC1-212ENST00000461239 PCMTD1Q96MG8 357 aaPredicted RBP13.07□□□□□ -0.32
ECHDC1-212ENST00000461239 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
ECHDC1-212ENST00000461239 GOLGA3Q08378 1498 aa13.06□□□□□ -0.32
ECHDC1-212ENST00000461239 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
ECHDC1-212ENST00000461239 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
ECHDC1-212ENST00000461239 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
ECHDC1-212ENST00000461239 KIAA0556O60303 1618 aa13.05□□□□□ -0.32
ECHDC1-212ENST00000461239 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
ECHDC1-212ENST00000461239 CARMIL2Q6F5E8 1435 aa13.05□□□□□ -0.32
ECHDC1-212ENST00000461239 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
ECHDC1-212ENST00000461239 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
ECHDC1-212ENST00000461239 PTPRGP23470 1445 aa13.03□□□□□ -0.32
ECHDC1-212ENST00000461239 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-212ENST00000461239 COL9A1P20849 921 aa13.02□□□□□ -0.33
ECHDC1-212ENST00000461239 FLIIQ13045 1269 aa13.02□□□□□ -0.33
ECHDC1-212ENST00000461239 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
ECHDC1-212ENST00000461239 BCL2L12Q9HB09 334 aa13.02□□□□□ -0.33
ECHDC1-212ENST00000461239 SKIV2LQ15477 1246 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-212ENST00000461239 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
ECHDC1-212ENST00000461239 RBM46Q8TBY0 533 aaKnown RBP13.01□□□□□ -0.33
ECHDC1-212ENST00000461239 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
ECHDC1-212ENST00000461239 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
ECHDC1-212ENST00000461239 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
ECHDC1-212ENST00000461239 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-212ENST00000461239 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
ECHDC1-212ENST00000461239 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
ECHDC1-212ENST00000461239 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
ECHDC1-212ENST00000461239 EYA1Q99502 592 aa12.97□□□□□ -0.33
ECHDC1-212ENST00000461239 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
ECHDC1-212ENST00000461239 MYSM1Q5VVJ2 828 aa12.96□□□□□ -0.33
ECHDC1-212ENST00000461239 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
ECHDC1-212ENST00000461239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 HOXB1P14653 301 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 PROCA1Q8NCQ7 364 aaPredicted RBP12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
ECHDC1-212ENST00000461239 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
ECHDC1-212ENST00000461239 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms