RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
PTPN12-209ENST00000460731 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
PTPN12-209ENST00000460731 NESP48681 1621 aa9.89□□□□□ -0.83
PTPN12-209ENST00000460731 E2F4Q16254 413 aa9.88□□□□□ -0.83
PTPN12-209ENST00000460731 GRXCR2A6NFK2 248 aa9.86□□□□□ -0.83
PTPN12-209ENST00000460731 PDS5BQ9NTI5 1447 aa9.85□□□□□ -0.83
PTPN12-209ENST00000460731 NPDC1Q9NQX5 325 aaPredicted RBP9.85□□□□□ -0.83
PTPN12-209ENST00000460731 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
PTPN12-209ENST00000460731 HDGFP51858 240 aaKnown RBP9.84□□□□□ -0.83
PTPN12-209ENST00000460731 TMUB1Q9BVT8 246 aa9.84□□□□□ -0.83
PTPN12-209ENST00000460731 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
PTPN12-209ENST00000460731 SWT1Q5T5J6 900 aaKnown RBP9.82□□□□□ -0.84
PTPN12-209ENST00000460731 RNF40O75150 1001 aa9.81□□□□□ -0.84
PTPN12-209ENST00000460731 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
PTPN12-209ENST00000460731 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
PTPN12-209ENST00000460731 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
PTPN12-209ENST00000460731 ZPR1O75312 459 aa9.8□□□□□ -0.84
PTPN12-209ENST00000460731 GGCXP38435 758 aa9.8□□□□□ -0.84
PTPN12-209ENST00000460731 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
PTPN12-209ENST00000460731 EYA1Q99502 592 aa9.8□□□□□ -0.84
PTPN12-209ENST00000460731 COPS2P61201 443 aa9.79□□□□□ -0.84
PTPN12-209ENST00000460731 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
PTPN12-209ENST00000460731 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-209ENST00000460731 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
PTPN12-209ENST00000460731 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
PTPN12-209ENST00000460731 ZNF775Q96BV0 537 aaPredicted RBP9.76□□□□□ -0.85
PTPN12-209ENST00000460731 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
PTPN12-209ENST00000460731 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
PTPN12-209ENST00000460731 PRR14Q9BWN1 585 aa9.73□□□□□ -0.85
PTPN12-209ENST00000460731 KIF21AQ7Z4S6 1674 aa9.73□□□□□ -0.85
PTPN12-209ENST00000460731 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
PTPN12-209ENST00000460731 ABCC8Q09428 1581 aa9.72□□□□□ -0.85
PTPN12-209ENST00000460731 SLC19A1P41440 591 aa9.72□□□□□ -0.85
PTPN12-209ENST00000460731 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
PTPN12-209ENST00000460731 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
PTPN12-209ENST00000460731 PRR20EP86478 221 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 PRR20CP86479 221 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 PRR20DP86480 221 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 PRR20BP86481 221 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 PRR20AP86496 221 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 BLOC1S3Q6QNY0 202 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
PTPN12-209ENST00000460731 URB2Q14146 1524 aaKnown RBP9.71□□□□□ -0.86
PTPN12-209ENST00000460731 MYT1Q01538 1121 aa9.7□□□□□ -0.86
PTPN12-209ENST00000460731 SPRYD7Q5W111 196 aa9.7□□□□□ -0.86
PTPN12-209ENST00000460731 WDR62O43379 1518 aa9.7□□□□□ -0.86
PTPN12-209ENST00000460731 THOC2Q8NI27 1593 aaKnown RBP9.7□□□□□ -0.86
PTPN12-209ENST00000460731 SLC4A3P48751 1232 aa9.69□□□□□ -0.86
PTPN12-209ENST00000460731 DGAT1O75907 488 aa9.68□□□□□ -0.86
PTPN12-209ENST00000460731 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
PTPN12-209ENST00000460731 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
PTPN12-209ENST00000460731 TOPBP1Q92547 1522 aa9.67□□□□□ -0.86
PTPN12-209ENST00000460731 CUX1P39880 1505 aa9.66□□□□□ -0.86
PTPN12-209ENST00000460731 WRNQ14191 1432 aaPredicted RBP eCLIP9.66□□□□□ -0.86
PTPN12-209ENST00000460731 TLL1O43897 1013 aa9.66□□□□□ -0.86
PTPN12-209ENST00000460731 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
PTPN12-209ENST00000460731 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-209ENST00000460731 DNMBPQ6XZF7 1577 aa9.66□□□□□ -0.86
PTPN12-209ENST00000460731 CUX2O14529 1486 aa9.66□□□□□ -0.86
PTPN12-209ENST00000460731 ACTN4O43707 911 aaKnown RBP9.65□□□□□ -0.86
PTPN12-209ENST00000460731 DNAJB2P25686 324 aa9.65□□□□□ -0.86
PTPN12-209ENST00000460731 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
PTPN12-209ENST00000460731 POTECB2RU33 542 aa9.64□□□□□ -0.87
PTPN12-209ENST00000460731 GDF9O60383 454 aa9.64□□□□□ -0.87
PTPN12-209ENST00000460731 PTGDRQ13258 359 aa9.64□□□□□ -0.87
PTPN12-209ENST00000460731 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
PTPN12-209ENST00000460731 ADGRG1Q9Y653 693 aa9.63□□□□□ -0.87
PTPN12-209ENST00000460731 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
PTPN12-209ENST00000460731 S1PR4O95977 384 aa9.62□□□□□ -0.87
PTPN12-209ENST00000460731 BIVM-ERCC5R4GMW8 1640 aa9.61□□□□□ -0.87
PTPN12-209ENST00000460731 PPEF1O14829 653 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-209ENST00000460731 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
PTPN12-209ENST00000460731 POLA1P09884 1462 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-209ENST00000460731 SYNJ1O43426 1573 aa9.6□□□□□ -0.87
PTPN12-209ENST00000460731 LCE2AQ5TA79 106 aaPredicted RBP9.6□□□□□ -0.87
PTPN12-209ENST00000460731 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
PTPN12-209ENST00000460731 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
PTPN12-209ENST00000460731 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
PTPN12-209ENST00000460731 PAXIP1Q6ZW49 1069 aaPredicted RBP9.59□□□□□ -0.87
PTPN12-209ENST00000460731 RCCD1A6NED2 376 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 ADH1BP00325 375 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 SLC10A3P09131 477 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 FGD5Q6ZNL6 1462 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 IFT140Q96RY7 1462 aa9.58□□□□□ -0.88
PTPN12-209ENST00000460731 SOGA1O94964 1423 aa9.57□□□□□ -0.88
PTPN12-209ENST00000460731 CFHP08603 1231 aa9.57□□□□□ -0.88
PTPN12-209ENST00000460731 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
PTPN12-209ENST00000460731 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
PTPN12-209ENST00000460731 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
PTPN12-209ENST00000460731 FAM187AA6NFU0 413 aa9.55□□□□□ -0.88
PTPN12-209ENST00000460731 TNFRSF10AO00220 468 aa9.55□□□□□ -0.88
PTPN12-209ENST00000460731 AAASQ9NRG9 546 aa9.55□□□□□ -0.88
PTPN12-209ENST00000460731 ABCA10Q8WWZ4 1543 aa9.55□□□□□ -0.88
PTPN12-209ENST00000460731 NR1I2O75469 434 aa9.54□□□□□ -0.88
PTPN12-209ENST00000460731 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
PTPN12-209ENST00000460731 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
PTPN12-209ENST00000460731 FAM161AQ3B820 660 aa9.53□□□□□ -0.88
PTPN12-209ENST00000460731 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
PTPN12-209ENST00000460731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms