RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
VAMP7-203ENST00000460621 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
VAMP7-203ENST00000460621 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
VAMP7-203ENST00000460621 UNC13BO14795 1591 aa16.91■□□□□ 0.3
VAMP7-203ENST00000460621 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
VAMP7-203ENST00000460621 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
VAMP7-203ENST00000460621 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
VAMP7-203ENST00000460621 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
VAMP7-203ENST00000460621 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
VAMP7-203ENST00000460621 E9PCH4 1651 aa16.89■□□□□ 0.29
VAMP7-203ENST00000460621 GCC2Q8IWJ2 1684 aa16.89■□□□□ 0.29
VAMP7-203ENST00000460621 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
VAMP7-203ENST00000460621 BCANQ96GW7 911 aa16.88■□□□□ 0.29
VAMP7-203ENST00000460621 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
VAMP7-203ENST00000460621 ITGAEP38570 1179 aa16.87■□□□□ 0.29
VAMP7-203ENST00000460621 ROBO1Q9Y6N7 1651 aa16.87■□□□□ 0.29
VAMP7-203ENST00000460621 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
VAMP7-203ENST00000460621 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
VAMP7-203ENST00000460621 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
VAMP7-203ENST00000460621 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
VAMP7-203ENST00000460621 NUP155O75694 1391 aa16.85■□□□□ 0.29
VAMP7-203ENST00000460621 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
VAMP7-203ENST00000460621 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
VAMP7-203ENST00000460621 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
VAMP7-203ENST00000460621 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
VAMP7-203ENST00000460621 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
VAMP7-203ENST00000460621 MSH6P52701 1360 aa16.81■□□□□ 0.28
VAMP7-203ENST00000460621 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
VAMP7-203ENST00000460621 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
VAMP7-203ENST00000460621 AMOTL2Q9Y2J4 779 aa16.76■□□□□ 0.27
VAMP7-203ENST00000460621 NRXN3Q9Y4C0 1643 aa16.75■□□□□ 0.27
VAMP7-203ENST00000460621 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
VAMP7-203ENST00000460621 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
VAMP7-203ENST00000460621 PIK3R4Q99570 1358 aa16.74■□□□□ 0.27
VAMP7-203ENST00000460621 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
VAMP7-203ENST00000460621 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
VAMP7-203ENST00000460621 C19orf44Q9H6X5 657 aa16.73■□□□□ 0.27
VAMP7-203ENST00000460621 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
VAMP7-203ENST00000460621 METP08581 1390 aa16.72■□□□□ 0.27
VAMP7-203ENST00000460621 JCADQ9P266 1359 aa16.72■□□□□ 0.27
VAMP7-203ENST00000460621 LRP6O75581 1613 aa16.71■□□□□ 0.27
VAMP7-203ENST00000460621 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
VAMP7-203ENST00000460621 SPHKAPQ2M3C7 1700 aa16.7■□□□□ 0.26
VAMP7-203ENST00000460621 TRPM2O94759 1503 aa16.7■□□□□ 0.26
VAMP7-203ENST00000460621 NAIPQ13075 1403 aa16.7■□□□□ 0.26
VAMP7-203ENST00000460621 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
VAMP7-203ENST00000460621 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
VAMP7-203ENST00000460621 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
VAMP7-203ENST00000460621 XRN1Q8IZH2 1706 aaKnown RBP16.68■□□□□ 0.26
VAMP7-203ENST00000460621 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
VAMP7-203ENST00000460621 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
VAMP7-203ENST00000460621 ATF3P18847 181 aa16.67■□□□□ 0.26
VAMP7-203ENST00000460621 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
VAMP7-203ENST00000460621 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
VAMP7-203ENST00000460621 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
VAMP7-203ENST00000460621 MST1RQ04912 1400 aa16.64■□□□□ 0.25
VAMP7-203ENST00000460621 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
VAMP7-203ENST00000460621 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
VAMP7-203ENST00000460621 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
VAMP7-203ENST00000460621 DCCP43146 1447 aa16.61■□□□□ 0.25
VAMP7-203ENST00000460621 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
VAMP7-203ENST00000460621 SHPRHQ149N8 1683 aa16.59■□□□□ 0.25
VAMP7-203ENST00000460621 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
VAMP7-203ENST00000460621 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
VAMP7-203ENST00000460621 FOXD1Q16676 465 aa16.58■□□□□ 0.24
VAMP7-203ENST00000460621 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
VAMP7-203ENST00000460621 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
VAMP7-203ENST00000460621 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
VAMP7-203ENST00000460621 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
VAMP7-203ENST00000460621 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
VAMP7-203ENST00000460621 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
VAMP7-203ENST00000460621 NALCNQ8IZF0 1738 aa16.56■□□□□ 0.24
VAMP7-203ENST00000460621 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
VAMP7-203ENST00000460621 MEX3CQ5U5Q3 659 aaKnown RBP16.55■□□□□ 0.24
VAMP7-203ENST00000460621 KIF1BO60333 1816 aa16.54■□□□□ 0.24
VAMP7-203ENST00000460621 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
VAMP7-203ENST00000460621 ZNF772Q68DY9 489 aaPredicted RBP16.53■□□□□ 0.24
VAMP7-203ENST00000460621 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
VAMP7-203ENST00000460621 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
VAMP7-203ENST00000460621 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.24
VAMP7-203ENST00000460621 VGFO15240 615 aaPredicted RBP16.52■□□□□ 0.24
VAMP7-203ENST00000460621 AFF2P51816 1311 aa16.51■□□□□ 0.23
VAMP7-203ENST00000460621 UPF1Q92900 1129 aaKnown RBP eCLIP16.51■□□□□ 0.23
VAMP7-203ENST00000460621 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
VAMP7-203ENST00000460621 PTCH1Q13635 1447 aa16.51■□□□□ 0.23
VAMP7-203ENST00000460621 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
VAMP7-203ENST00000460621 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
VAMP7-203ENST00000460621 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
VAMP7-203ENST00000460621 PPLO60437 1756 aa16.49■□□□□ 0.23
VAMP7-203ENST00000460621 RXRBP28702 533 aa16.48■□□□□ 0.23
VAMP7-203ENST00000460621 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
VAMP7-203ENST00000460621 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
VAMP7-203ENST00000460621 LAMC1P11047 1609 aa16.46■□□□□ 0.23
VAMP7-203ENST00000460621 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
VAMP7-203ENST00000460621 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
VAMP7-203ENST00000460621 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
VAMP7-203ENST00000460621 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
VAMP7-203ENST00000460621 WAPLQ7Z5K2 1190 aa16.44■□□□□ 0.22
VAMP7-203ENST00000460621 QTRT2Q9H974 415 aaKnown RBP16.44■□□□□ 0.22
VAMP7-203ENST00000460621 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms