RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 BCANQ96GW7 911 aa31.67■■■□□ 2.66
ABCD4-202ENST00000460308 RIMS2Q9UQ26 1411 aa31.66■■■□□ 2.66
ABCD4-202ENST00000460308 ZNF326Q5BKZ1 582 aaKnown RBP31.66■■■□□ 2.66
ABCD4-202ENST00000460308 CLTCL1P53675 1640 aa31.64■■■□□ 2.66
ABCD4-202ENST00000460308 ZFYVE9O95405 1425 aa31.61■■■□□ 2.65
ABCD4-202ENST00000460308 KIF1BO60333 1816 aa31.61■■■□□ 2.65
ABCD4-202ENST00000460308 NUTM2DQ5VT03 806 aaPredicted RBP31.6■■■□□ 2.65
ABCD4-202ENST00000460308 LTBP4Q8N2S1 1624 aa31.59■■■□□ 2.65
ABCD4-202ENST00000460308 SENP3Q9H4L4 574 aaPredicted RBP31.57■■■□□ 2.64
ABCD4-202ENST00000460308 TRIM26Q12899 539 aaPredicted RBP31.56■■■□□ 2.64
ABCD4-202ENST00000460308 CCDC144AA2RUR9 1427 aa31.56■■■□□ 2.64
ABCD4-202ENST00000460308 SLC26A8Q96RN1 970 aa31.55■■■□□ 2.64
ABCD4-202ENST00000460308 PLEKHG1Q9ULL1 1385 aa31.54■■■□□ 2.64
ABCD4-202ENST00000460308 FBXO41Q8TF61 875 aa31.48■■■□□ 2.63
ABCD4-202ENST00000460308 CPS1P31327 1500 aa31.48■■■□□ 2.63
ABCD4-202ENST00000460308 RPGRIP1LQ68CZ1 1315 aa31.46■■■□□ 2.63
ABCD4-202ENST00000460308 RGL3Q3MIN7 710 aa31.44■■■□□ 2.62
ABCD4-202ENST00000460308 ILDR1Q86SU0 546 aaPredicted RBP31.43■■■□□ 2.62
ABCD4-202ENST00000460308 TBX22Q9Y458 520 aa31.43■■■□□ 2.62
ABCD4-202ENST00000460308 VGFO15240 615 aaPredicted RBP31.42■■■□□ 2.62
ABCD4-202ENST00000460308 IQSEC2Q5JU85 1478 aa31.41■■■□□ 2.62
ABCD4-202ENST00000460308 NEXMIFQ5QGS0 1516 aa31.41■■■□□ 2.62
ABCD4-202ENST00000460308 KCNA6P17658 529 aa31.4■■■□□ 2.62
ABCD4-202ENST00000460308 ANKRD30BQ9BXX2 1392 aa31.39■■■□□ 2.62
ABCD4-202ENST00000460308 STRCP1A6NGW2 1772 aa31.38■■■□□ 2.61
ABCD4-202ENST00000460308 ADAMTS13Q76LX8 1427 aa31.36■■■□□ 2.61
ABCD4-202ENST00000460308 SPATA31E1Q6ZUB1 1445 aa31.35■■■□□ 2.61
ABCD4-202ENST00000460308 DIP2AQ14689 1571 aa31.33■■■□□ 2.61
ABCD4-202ENST00000460308 PPLO60437 1756 aa31.31■■■□□ 2.6
ABCD4-202ENST00000460308 LRRC7Q96NW7 1537 aa31.31■■■□□ 2.6
ABCD4-202ENST00000460308 SETBP1Q9Y6X0 1596 aa31.3■■■□□ 2.6
ABCD4-202ENST00000460308 PROSER2Q86WR7 435 aaPredicted RBP31.3■■■□□ 2.6
ABCD4-202ENST00000460308 PIK3R4Q99570 1358 aa31.3■■■□□ 2.6
ABCD4-202ENST00000460308 UBAP1LF5GYI3 381 aa31.28■■■□□ 2.6
ABCD4-202ENST00000460308 CHD2O14647 1828 aaKnown RBP31.27■■■□□ 2.6
ABCD4-202ENST00000460308 NRXN3Q9Y4C0 1643 aa31.25■■■□□ 2.59
ABCD4-202ENST00000460308 NWD1Q149M9 1564 aa31.24■■■□□ 2.59
ABCD4-202ENST00000460308 NKTRP30414 1462 aaKnown RBP31.23■■■□□ 2.59
ABCD4-202ENST00000460308 TOM1O60784 492 aa31.23■■■□□ 2.59
ABCD4-202ENST00000460308 AMOTL2Q9Y2J4 779 aa31.23■■■□□ 2.59
ABCD4-202ENST00000460308 ADGRF5Q8IZF2 1346 aa31.23■■■□□ 2.59
ABCD4-202ENST00000460308 TMEM94Q12767 1356 aa31.2■■■□□ 2.59
ABCD4-202ENST00000460308 METP08581 1390 aa31.19■■■□□ 2.58
ABCD4-202ENST00000460308 RBM33Q96EV2 1170 aaKnown RBP31.19■■■□□ 2.58
ABCD4-202ENST00000460308 IFT172Q9UG01 1749 aa31.18■■■□□ 2.58
ABCD4-202ENST00000460308 PTPRUQ92729 1446 aa31.16■■■□□ 2.58
ABCD4-202ENST00000460308 ALKQ9UM73 1620 aa31.16■■■□□ 2.58
ABCD4-202ENST00000460308 SCAF1Q9H7N4 1312 aaKnown RBP31.15■■■□□ 2.58
ABCD4-202ENST00000460308 C14orf37Q86TY3 774 aa31.14■■■□□ 2.58
ABCD4-202ENST00000460308 XIRP1Q702N8 1843 aaKnown RBP31.14■■■□□ 2.58
ABCD4-202ENST00000460308 DCAF11Q8TEB1 546 aa31.13■■■□□ 2.57
ABCD4-202ENST00000460308 PIP4K2BP78356 416 aa31.12■■■□□ 2.57
ABCD4-202ENST00000460308 KDM2AQ9Y2K7 1162 aa31.12■■■□□ 2.57
ABCD4-202ENST00000460308 DHX57Q6P158 1386 aaKnown RBP31.1■■■□□ 2.57
ABCD4-202ENST00000460308 STAC3Q96MF2 364 aa31.1■■■□□ 2.57
ABCD4-202ENST00000460308 MYOM2P54296 1465 aa31.09■■■□□ 2.57
ABCD4-202ENST00000460308 PCGF6Q9BYE7 350 aa31.09■■■□□ 2.57
ABCD4-202ENST00000460308 PIK3C2GO75747 1445 aa31.08■■■□□ 2.57
ABCD4-202ENST00000460308 MSH6P52701 1360 aa31.08■■■□□ 2.57
ABCD4-202ENST00000460308 SETD1AO15047 1707 aaKnown RBP31.07■■■□□ 2.56
ABCD4-202ENST00000460308 NCOA3Q9Y6Q9 1424 aa31.07■■■□□ 2.56
ABCD4-202ENST00000460308 XRN1Q8IZH2 1706 aaKnown RBP31.06■■■□□ 2.56
ABCD4-202ENST00000460308 C14orf93Q9H972 538 aaKnown RBP31.04■■■□□ 2.56
ABCD4-202ENST00000460308 NEUROD1Q13562 356 aa31.03■■■□□ 2.56
ABCD4-202ENST00000460308 NRXN1Q9ULB1 1477 aa31.02■■■□□ 2.56
ABCD4-202ENST00000460308 SIN3AQ96ST3 1273 aa31.02■■■□□ 2.56
ABCD4-202ENST00000460308 CFAP70Q5T0N1 1121 aa31.01■■■□□ 2.55
ABCD4-202ENST00000460308 TMEM132EQ6IEE7 984 aa31.01■■■□□ 2.55
ABCD4-202ENST00000460308 C19orf44Q9H6X5 657 aa31.01■■■□□ 2.55
ABCD4-202ENST00000460308 STK26Q9P289 416 aa31■■■□□ 2.55
ABCD4-202ENST00000460308 ATF3P18847 181 aa30.97■■■□□ 2.55
ABCD4-202ENST00000460308 CADPS2Q86UW7 1296 aa30.95■■■□□ 2.55
ABCD4-202ENST00000460308 PTCH1Q13635 1447 aa30.95■■■□□ 2.54
ABCD4-202ENST00000460308 LAMC1P11047 1609 aa30.95■■■□□ 2.54
ABCD4-202ENST00000460308 LRPPRCP42704 1394 aaKnown RBP30.94■■■□□ 2.54
ABCD4-202ENST00000460308 ROBO2Q9HCK4 1378 aa30.94■■■□□ 2.54
ABCD4-202ENST00000460308 SLAIN2Q9P270 581 aa30.92■■■□□ 2.54
ABCD4-202ENST00000460308 ABCC11Q96J66 1382 aa30.91■■■□□ 2.54
ABCD4-202ENST00000460308 YTHDC2Q9H6S0 1430 aaKnown RBP30.9■■■□□ 2.54
ABCD4-202ENST00000460308 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.9■■■□□ 2.54
ABCD4-202ENST00000460308 L3MBTL2Q969R5 705 aa30.9■■■□□ 2.54
ABCD4-202ENST00000460308 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
ABCD4-202ENST00000460308 ASXL1Q8IXJ9 1541 aa30.89■■■□□ 2.54
ABCD4-202ENST00000460308 ADGRL3Q9HAR2 1447 aa30.87■■■□□ 2.53
ABCD4-202ENST00000460308 HSPA1LP34931 641 aa30.86■■■□□ 2.53
ABCD4-202ENST00000460308 TECPR2O15040 1411 aa30.86■■■□□ 2.53
ABCD4-202ENST00000460308 DCCP43146 1447 aa30.85■■■□□ 2.53
ABCD4-202ENST00000460308 FAM135BQ49AJ0 1406 aa30.85■■■□□ 2.53
ABCD4-202ENST00000460308 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
ABCD4-202ENST00000460308 SIRT1Q96EB6 747 aa30.83■■■□□ 2.53
ABCD4-202ENST00000460308 KNDC1Q76NI1 1749 aa30.82■■■□□ 2.52
ABCD4-202ENST00000460308 NALCNQ8IZF0 1738 aa30.8■■■□□ 2.52
ABCD4-202ENST00000460308 TRAK1Q9UPV9 953 aa30.79■■■□□ 2.52
ABCD4-202ENST00000460308 POGKQ9P215 609 aa30.78■■■□□ 2.52
ABCD4-202ENST00000460308 ADGRB1O14514 1584 aa30.78■■■□□ 2.52
ABCD4-202ENST00000460308 ROBO1Q9Y6N7 1651 aa30.78■■■□□ 2.52
ABCD4-202ENST00000460308 TONSLQ96HA7 1378 aa30.77■■■□□ 2.52
ABCD4-202ENST00000460308 PLEKHH1Q9ULM0 1364 aa30.76■■■□□ 2.51
ABCD4-202ENST00000460308 PRAM1Q96QH2 718 aa30.75■■■□□ 2.51
ABCD4-202ENST00000460308 SAFB2Q14151 953 aaKnown RBP eCLIP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms