RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 UNC13BO14795 1591 aa25.07■■□□□ 1.6
RUNX1-209ENST00000460207 PLEKHG1Q9ULL1 1385 aa25.06■■□□□ 1.6
RUNX1-209ENST00000460207 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.6
RUNX1-209ENST00000460207 GCC2Q8IWJ2 1684 aa25.06■■□□□ 1.6
RUNX1-209ENST00000460207 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
RUNX1-209ENST00000460207 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
RUNX1-209ENST00000460207 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
RUNX1-209ENST00000460207 TMEM131LA2VDJ0 1609 aa25.04■■□□□ 1.6
RUNX1-209ENST00000460207 NKTRP30414 1462 aaKnown RBP25.03■■□□□ 1.6
RUNX1-209ENST00000460207 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
RUNX1-209ENST00000460207 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
RUNX1-209ENST00000460207 NUP155O75694 1391 aa25.02■■□□□ 1.6
RUNX1-209ENST00000460207 NWD1Q149M9 1564 aa25■■□□□ 1.59
RUNX1-209ENST00000460207 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
RUNX1-209ENST00000460207 IQGAP3Q86VI3 1631 aa24.99■■□□□ 1.59
RUNX1-209ENST00000460207 MYO5BQ9ULV0 1848 aa24.99■■□□□ 1.59
RUNX1-209ENST00000460207 E9PCH4 1651 aa24.98■■□□□ 1.59
RUNX1-209ENST00000460207 ITGAEP38570 1179 aa24.98■■□□□ 1.59
RUNX1-209ENST00000460207 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
RUNX1-209ENST00000460207 MSH6P52701 1360 aa24.96■■□□□ 1.59
RUNX1-209ENST00000460207 SLAIN2Q9P270 581 aa24.96■■□□□ 1.59
RUNX1-209ENST00000460207 CHD2O14647 1828 aaKnown RBP24.96■■□□□ 1.59
RUNX1-209ENST00000460207 NCOA3Q9Y6Q9 1424 aa24.95■■□□□ 1.58
RUNX1-209ENST00000460207 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
RUNX1-209ENST00000460207 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
RUNX1-209ENST00000460207 ADAMTS13Q76LX8 1427 aa24.9■■□□□ 1.58
RUNX1-209ENST00000460207 ROBO1Q9Y6N7 1651 aa24.88■■□□□ 1.57
RUNX1-209ENST00000460207 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
RUNX1-209ENST00000460207 RGS17Q9UGC6 210 aaPredicted RBP24.87■■□□□ 1.57
RUNX1-209ENST00000460207 DIP2AQ14689 1571 aa24.87■■□□□ 1.57
RUNX1-209ENST00000460207 C19orf44Q9H6X5 657 aa24.86■■□□□ 1.57
RUNX1-209ENST00000460207 CADPS2Q86UW7 1296 aa24.83■■□□□ 1.57
RUNX1-209ENST00000460207 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
RUNX1-209ENST00000460207 RRBP1Q9P2E9 1410 aaKnown RBP24.82■■□□□ 1.56
RUNX1-209ENST00000460207 AMOTL2Q9Y2J4 779 aa24.82■■□□□ 1.56
RUNX1-209ENST00000460207 ATF3P18847 181 aa24.8■■□□□ 1.56
RUNX1-209ENST00000460207 TRPM2O94759 1503 aa24.78■■□□□ 1.56
RUNX1-209ENST00000460207 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
RUNX1-209ENST00000460207 SPHKAPQ2M3C7 1700 aa24.77■■□□□ 1.56
RUNX1-209ENST00000460207 JCADQ9P266 1359 aa24.77■■□□□ 1.56
RUNX1-209ENST00000460207 NAIPQ13075 1403 aa24.76■■□□□ 1.55
RUNX1-209ENST00000460207 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
RUNX1-209ENST00000460207 PHLPP1O60346 1717 aa24.74■■□□□ 1.55
RUNX1-209ENST00000460207 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.73■■□□□ 1.55
RUNX1-209ENST00000460207 SETBP1Q9Y6X0 1596 aa24.73■■□□□ 1.55
RUNX1-209ENST00000460207 POTEAQ6S8J7 498 aa24.71■■□□□ 1.55
RUNX1-209ENST00000460207 DCCP43146 1447 aa24.69■■□□□ 1.54
RUNX1-209ENST00000460207 NRXN3Q9Y4C0 1643 aa24.68■■□□□ 1.54
RUNX1-209ENST00000460207 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
RUNX1-209ENST00000460207 METP08581 1390 aa24.67■■□□□ 1.54
RUNX1-209ENST00000460207 COL16A1Q07092 1604 aaPredicted RBP24.67■■□□□ 1.54
RUNX1-209ENST00000460207 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
RUNX1-209ENST00000460207 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
RUNX1-209ENST00000460207 HFM1A2PYH4 1435 aa24.66■■□□□ 1.54
RUNX1-209ENST00000460207 CLTCL1P53675 1640 aa24.65■■□□□ 1.54
RUNX1-209ENST00000460207 BRINP3Q76B58 766 aa24.65■■□□□ 1.54
RUNX1-209ENST00000460207 XRN1Q8IZH2 1706 aaKnown RBP24.65■■□□□ 1.54
RUNX1-209ENST00000460207 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
RUNX1-209ENST00000460207 NEXMIFQ5QGS0 1516 aa24.63■■□□□ 1.53
RUNX1-209ENST00000460207 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
RUNX1-209ENST00000460207 SLC4A1APQ9BWU0 796 aaKnown RBP24.62■■□□□ 1.53
RUNX1-209ENST00000460207 KIF1BO60333 1816 aa24.62■■□□□ 1.53
RUNX1-209ENST00000460207 MST1RQ04912 1400 aa24.57■■□□□ 1.52
RUNX1-209ENST00000460207 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
RUNX1-209ENST00000460207 ZNF772Q68DY9 489 aaPredicted RBP24.56■■□□□ 1.52
RUNX1-209ENST00000460207 MEX3CQ5U5Q3 659 aaKnown RBP24.55■■□□□ 1.52
RUNX1-209ENST00000460207 LRRC59Q96AG4 307 aaKnown RBP24.55■■□□□ 1.52
RUNX1-209ENST00000460207 SHPRHQ149N8 1683 aa24.55■■□□□ 1.52
RUNX1-209ENST00000460207 SETD5Q9C0A6 1442 aa24.53■■□□□ 1.52
RUNX1-209ENST00000460207 ASXL1Q8IXJ9 1541 aa24.53■■□□□ 1.52
RUNX1-209ENST00000460207 LRP6O75581 1613 aa24.53■■□□□ 1.52
RUNX1-209ENST00000460207 PTCH1Q13635 1447 aa24.5■■□□□ 1.51
RUNX1-209ENST00000460207 PRAG1Q86YV5 1406 aa24.49■■□□□ 1.51
RUNX1-209ENST00000460207 NHSL1Q5SYE7 1610 aa24.46■■□□□ 1.51
RUNX1-209ENST00000460207 ROBO2Q9HCK4 1378 aa24.46■■□□□ 1.51
RUNX1-209ENST00000460207 ACIN1Q9UKV3 1341 aaKnown RBP24.46■■□□□ 1.51
RUNX1-209ENST00000460207 NUTM2BA6NNL0 878 aaPredicted RBP24.46■■□□□ 1.51
RUNX1-209ENST00000460207 NUTM2EB1AL46 878 aaPredicted RBP24.46■■□□□ 1.51
RUNX1-209ENST00000460207 NUTM2AQ8IVF1 878 aaPredicted RBP24.46■■□□□ 1.51
RUNX1-209ENST00000460207 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
RUNX1-209ENST00000460207 SETD1AO15047 1707 aaKnown RBP24.44■■□□□ 1.5
RUNX1-209ENST00000460207 FOXD1Q16676 465 aa24.44■■□□□ 1.5
RUNX1-209ENST00000460207 MPHOSPH9Q99550 1183 aa24.44■■□□□ 1.5
RUNX1-209ENST00000460207 NALCNQ8IZF0 1738 aa24.44■■□□□ 1.5
RUNX1-209ENST00000460207 PPLO60437 1756 aa24.42■■□□□ 1.5
RUNX1-209ENST00000460207 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
RUNX1-209ENST00000460207 RXRBP28702 533 aa24.41■■□□□ 1.5
RUNX1-209ENST00000460207 CCDC144AA2RUR9 1427 aa24.41■■□□□ 1.5
RUNX1-209ENST00000460207 PNPLA6Q8IY17 1366 aa24.4■■□□□ 1.5
RUNX1-209ENST00000460207 ANKRD30BQ9BXX2 1392 aa24.4■■□□□ 1.5
RUNX1-209ENST00000460207 SOS2Q07890 1332 aaPredicted RBP24.38■■□□□ 1.49
RUNX1-209ENST00000460207 SPATA31E1Q6ZUB1 1445 aa24.38■■□□□ 1.49
RUNX1-209ENST00000460207 RGL3Q3MIN7 710 aa24.38■■□□□ 1.49
RUNX1-209ENST00000460207 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
RUNX1-209ENST00000460207 AFF2P51816 1311 aa24.37■■□□□ 1.49
RUNX1-209ENST00000460207 ADGRF5Q8IZF2 1346 aa24.37■■□□□ 1.49
RUNX1-209ENST00000460207 LAMC1P11047 1609 aa24.37■■□□□ 1.49
RUNX1-209ENST00000460207 CDK12Q9NYV4 1490 aaPredicted RBP24.34■■□□□ 1.49
RUNX1-209ENST00000460207 C8orf37Q96NL8 207 aa24.33■■□□□ 1.49
RUNX1-209ENST00000460207 LRPPRCP42704 1394 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms