RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
CENPA-204ENST00000460030 SCAF1Q9H7N4 1312 aaKnown RBP27.83■■■□□ 2.05
CENPA-204ENST00000460030 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
CENPA-204ENST00000460030 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
CENPA-204ENST00000460030 MYO5BQ9ULV0 1848 aa27.8■■■□□ 2.04
CENPA-204ENST00000460030 TMEM131LA2VDJ0 1609 aa27.79■■■□□ 2.04
CENPA-204ENST00000460030 SLC26A8Q96RN1 970 aa27.79■■■□□ 2.04
CENPA-204ENST00000460030 ZFYVE9O95405 1425 aa27.77■■■□□ 2.04
CENPA-204ENST00000460030 TOM1O60784 492 aa27.77■■■□□ 2.04
CENPA-204ENST00000460030 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
CENPA-204ENST00000460030 ALKQ9UM73 1620 aa27.76■■■□□ 2.03
CENPA-204ENST00000460030 BCANQ96GW7 911 aa27.75■■■□□ 2.03
CENPA-204ENST00000460030 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
CENPA-204ENST00000460030 NUTM2DQ5VT03 806 aaPredicted RBP27.71■■■□□ 2.03
CENPA-204ENST00000460030 FOXD1Q16676 465 aa27.7■■■□□ 2.02
CENPA-204ENST00000460030 PLEKHG1Q9ULL1 1385 aa27.69■■■□□ 2.02
CENPA-204ENST00000460030 TRPM2O94759 1503 aa27.68■■■□□ 2.02
CENPA-204ENST00000460030 HSPA1LP34931 641 aa27.68■■■□□ 2.02
CENPA-204ENST00000460030 DISP3Q9P2K9 1392 aa27.68■■■□□ 2.02
CENPA-204ENST00000460030 SPHKAPQ2M3C7 1700 aa27.67■■■□□ 2.02
CENPA-204ENST00000460030 KCNA6P17658 529 aa27.66■■■□□ 2.02
CENPA-204ENST00000460030 XIRP1Q702N8 1843 aaKnown RBP27.66■■■□□ 2.02
CENPA-204ENST00000460030 RBM33Q96EV2 1170 aaKnown RBP27.65■■■□□ 2.02
CENPA-204ENST00000460030 TMEM94Q12767 1356 aa27.64■■■□□ 2.02
CENPA-204ENST00000460030 HDGFP51858 240 aaKnown RBP27.64■■■□□ 2.02
CENPA-204ENST00000460030 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.63■■■□□ 2.01
CENPA-204ENST00000460030 NWD1Q149M9 1564 aa27.62■■■□□ 2.01
CENPA-204ENST00000460030 PROSER2Q86WR7 435 aaPredicted RBP27.6■■■□□ 2.01
CENPA-204ENST00000460030 CLTCL1P53675 1640 aa27.59■■■□□ 2.01
CENPA-204ENST00000460030 ADAMTS13Q76LX8 1427 aa27.58■■■□□ 2.01
CENPA-204ENST00000460030 NKTRP30414 1462 aaKnown RBP27.58■■■□□ 2.01
CENPA-204ENST00000460030 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2
CENPA-204ENST00000460030 PCGF6Q9BYE7 350 aa27.57■■■□□ 2
CENPA-204ENST00000460030 ZNF326Q5BKZ1 582 aaKnown RBP27.55■■■□□ 2
CENPA-204ENST00000460030 ANKRD30BQ9BXX2 1392 aa27.55■■■□□ 2
CENPA-204ENST00000460030 TBX22Q9Y458 520 aa27.54■■■□□ 2
CENPA-204ENST00000460030 CHD2O14647 1828 aaKnown RBP27.52■■■□□ 2
CENPA-204ENST00000460030 DIP2AQ14689 1571 aa27.51■■□□□ 1.99
CENPA-204ENST00000460030 ILDR2Q71H61 639 aa27.5■■□□□ 1.99
CENPA-204ENST00000460030 NRXN3Q9Y4C0 1643 aa27.46■■□□□ 1.99
CENPA-204ENST00000460030 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
CENPA-204ENST00000460030 MSH6P52701 1360 aa27.45■■□□□ 1.98
CENPA-204ENST00000460030 RPGRIP1LQ68CZ1 1315 aa27.44■■□□□ 1.98
CENPA-204ENST00000460030 SPATA31E1Q6ZUB1 1445 aa27.44■■□□□ 1.98
CENPA-204ENST00000460030 PTPRUQ92729 1446 aa27.44■■□□□ 1.98
CENPA-204ENST00000460030 DHX57Q6P158 1386 aaKnown RBP27.44■■□□□ 1.98
CENPA-204ENST00000460030 SETBP1Q9Y6X0 1596 aa27.43■■□□□ 1.98
CENPA-204ENST00000460030 PIK3R4Q99570 1358 aa27.43■■□□□ 1.98
CENPA-204ENST00000460030 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
CENPA-204ENST00000460030 KIF1BO60333 1816 aa27.42■■□□□ 1.98
CENPA-204ENST00000460030 FAM135BQ49AJ0 1406 aa27.41■■□□□ 1.98
CENPA-204ENST00000460030 AMOTL2Q9Y2J4 779 aa27.4■■□□□ 1.98
CENPA-204ENST00000460030 ROBO1Q9Y6N7 1651 aa27.38■■□□□ 1.97
CENPA-204ENST00000460030 RGL3Q3MIN7 710 aa27.38■■□□□ 1.97
CENPA-204ENST00000460030 C14orf37Q86TY3 774 aa27.38■■□□□ 1.97
CENPA-204ENST00000460030 METP08581 1390 aa27.37■■□□□ 1.97
CENPA-204ENST00000460030 VGFO15240 615 aaPredicted RBP27.37■■□□□ 1.97
CENPA-204ENST00000460030 XRN1Q8IZH2 1706 aaKnown RBP27.33■■□□□ 1.97
CENPA-204ENST00000460030 SLAIN2Q9P270 581 aa27.33■■□□□ 1.97
CENPA-204ENST00000460030 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.96
CENPA-204ENST00000460030 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.29■■□□□ 1.96
CENPA-204ENST00000460030 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
CENPA-204ENST00000460030 PPLO60437 1756 aa27.25■■□□□ 1.95
CENPA-204ENST00000460030 ATF3P18847 181 aa27.25■■□□□ 1.95
CENPA-204ENST00000460030 STAC3Q96MF2 364 aa27.25■■□□□ 1.95
CENPA-204ENST00000460030 CADPS2Q86UW7 1296 aa27.24■■□□□ 1.95
CENPA-204ENST00000460030 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
CENPA-204ENST00000460030 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
CENPA-204ENST00000460030 SETD1AO15047 1707 aaKnown RBP27.23■■□□□ 1.95
CENPA-204ENST00000460030 ADGRF5Q8IZF2 1346 aa27.22■■□□□ 1.95
CENPA-204ENST00000460030 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
CENPA-204ENST00000460030 MYOM2P54296 1465 aa27.19■■□□□ 1.94
CENPA-204ENST00000460030 SOCS7O14512 581 aa27.18■■□□□ 1.94
CENPA-204ENST00000460030 DCAF11Q8TEB1 546 aa27.18■■□□□ 1.94
CENPA-204ENST00000460030 DCCP43146 1447 aa27.17■■□□□ 1.94
CENPA-204ENST00000460030 IFT172Q9UG01 1749 aa27.17■■□□□ 1.94
CENPA-204ENST00000460030 NEUROD1Q13562 356 aa27.17■■□□□ 1.94
CENPA-204ENST00000460030 NRXN1Q9ULB1 1477 aa27.16■■□□□ 1.94
CENPA-204ENST00000460030 ADGRL3Q9HAR2 1447 aa27.16■■□□□ 1.94
CENPA-204ENST00000460030 ROBO2Q9HCK4 1378 aa27.15■■□□□ 1.94
CENPA-204ENST00000460030 NALCNQ8IZF0 1738 aa27.15■■□□□ 1.94
CENPA-204ENST00000460030 PIK3C2GO75747 1445 aa27.15■■□□□ 1.94
CENPA-204ENST00000460030 CLSPNQ9HAW4 1339 aa27.15■■□□□ 1.94
CENPA-204ENST00000460030 COL16A1Q07092 1604 aaPredicted RBP27.14■■□□□ 1.94
CENPA-204ENST00000460030 MST1RQ04912 1400 aa27.14■■□□□ 1.93
CENPA-204ENST00000460030 PTCH1Q13635 1447 aa27.14■■□□□ 1.93
CENPA-204ENST00000460030 BRINP3Q76B58 766 aa27.13■■□□□ 1.93
CENPA-204ENST00000460030 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
CENPA-204ENST00000460030 AHDC1Q5TGY3 1603 aaPredicted RBP27.1■■□□□ 1.93
CENPA-204ENST00000460030 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
CENPA-204ENST00000460030 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
CENPA-204ENST00000460030 JCADQ9P266 1359 aa27.09■■□□□ 1.93
CENPA-204ENST00000460030 ASXL1Q8IXJ9 1541 aa27.09■■□□□ 1.93
CENPA-204ENST00000460030 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
CENPA-204ENST00000460030 PRAG1Q86YV5 1406 aa27.07■■□□□ 1.92
CENPA-204ENST00000460030 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
CENPA-204ENST00000460030 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
CENPA-204ENST00000460030 STK26Q9P289 416 aa27.04■■□□□ 1.92
CENPA-204ENST00000460030 TMEM132EQ6IEE7 984 aa27.03■■□□□ 1.92
CENPA-204ENST00000460030 DDX17Q92841 729 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 466.9 ms