RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
SP140-207ENST00000456542 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
SP140-207ENST00000456542 TXNDC2Q86VQ3 553 aa12.62□□□□□ -0.39
SP140-207ENST00000456542 LTKP29376 864 aa12.61□□□□□ -0.39
SP140-207ENST00000456542 LTBP4Q8N2S1 1624 aa12.61□□□□□ -0.39
SP140-207ENST00000456542 RIMS2Q9UQ26 1411 aa12.61□□□□□ -0.39
SP140-207ENST00000456542 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
SP140-207ENST00000456542 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
SP140-207ENST00000456542 CCDC144AA2RUR9 1427 aa12.58□□□□□ -0.4
SP140-207ENST00000456542 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
SP140-207ENST00000456542 PLEKHG1Q9ULL1 1385 aa12.57□□□□□ -0.4
SP140-207ENST00000456542 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
SP140-207ENST00000456542 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
SP140-207ENST00000456542 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
SP140-207ENST00000456542 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
SP140-207ENST00000456542 CPS1P31327 1500 aa12.56□□□□□ -0.4
SP140-207ENST00000456542 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
SP140-207ENST00000456542 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
SP140-207ENST00000456542 PPLO60437 1756 aa12.55□□□□□ -0.4
SP140-207ENST00000456542 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
SP140-207ENST00000456542 STRCP1A6NGW2 1772 aa12.54□□□□□ -0.4
SP140-207ENST00000456542 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
SP140-207ENST00000456542 ZNF326Q5BKZ1 582 aaKnown RBP12.53□□□□□ -0.4
SP140-207ENST00000456542 RPGRIP1LQ68CZ1 1315 aa12.53□□□□□ -0.4
SP140-207ENST00000456542 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
SP140-207ENST00000456542 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.4
SP140-207ENST00000456542 IFT172Q9UG01 1749 aa12.52□□□□□ -0.41
SP140-207ENST00000456542 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
SP140-207ENST00000456542 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
SP140-207ENST00000456542 NWD1Q149M9 1564 aa12.52□□□□□ -0.41
SP140-207ENST00000456542 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
SP140-207ENST00000456542 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
SP140-207ENST00000456542 SLC26A8Q96RN1 970 aa12.5□□□□□ -0.41
SP140-207ENST00000456542 TBX22Q9Y458 520 aa12.5□□□□□ -0.41
SP140-207ENST00000456542 PIK3R4Q99570 1358 aa12.49□□□□□ -0.41
SP140-207ENST00000456542 BCANQ96GW7 911 aa12.49□□□□□ -0.41
SP140-207ENST00000456542 LRRC7Q96NW7 1537 aa12.48□□□□□ -0.41
SP140-207ENST00000456542 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
SP140-207ENST00000456542 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
SP140-207ENST00000456542 FBXO41Q8TF61 875 aa12.48□□□□□ -0.41
SP140-207ENST00000456542 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
SP140-207ENST00000456542 KCNA6P17658 529 aa12.47□□□□□ -0.41
SP140-207ENST00000456542 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
SP140-207ENST00000456542 MYOM2P54296 1465 aa12.45□□□□□ -0.42
SP140-207ENST00000456542 XRN1Q8IZH2 1706 aaKnown RBP12.45□□□□□ -0.42
SP140-207ENST00000456542 RGL3Q3MIN7 710 aa12.44□□□□□ -0.42
SP140-207ENST00000456542 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
SP140-207ENST00000456542 NRXN1Q9ULB1 1477 aa12.43□□□□□ -0.42
SP140-207ENST00000456542 LAMC1P11047 1609 aa12.42□□□□□ -0.42
SP140-207ENST00000456542 PIK3C2GO75747 1445 aa12.42□□□□□ -0.42
SP140-207ENST00000456542 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
SP140-207ENST00000456542 DHX57Q6P158 1386 aaKnown RBP12.42□□□□□ -0.42
SP140-207ENST00000456542 ADGRF5Q8IZF2 1346 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 PRAG1Q86YV5 1406 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 METP08581 1390 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
SP140-207ENST00000456542 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
SP140-207ENST00000456542 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
SP140-207ENST00000456542 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
SP140-207ENST00000456542 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
SP140-207ENST00000456542 TOM1O60784 492 aa12.37□□□□□ -0.43
SP140-207ENST00000456542 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
SP140-207ENST00000456542 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
SP140-207ENST00000456542 MSH6P52701 1360 aa12.35□□□□□ -0.43
SP140-207ENST00000456542 DCAF11Q8TEB1 546 aa12.35□□□□□ -0.43
SP140-207ENST00000456542 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
SP140-207ENST00000456542 TECPR2O15040 1411 aa12.35□□□□□ -0.43
SP140-207ENST00000456542 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
SP140-207ENST00000456542 KIAA1210Q9ULL0 1709 aa12.34□□□□□ -0.43
SP140-207ENST00000456542 LRPPRCP42704 1394 aaKnown RBP12.33□□□□□ -0.44
SP140-207ENST00000456542 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
SP140-207ENST00000456542 DCCP43146 1447 aa12.33□□□□□ -0.44
SP140-207ENST00000456542 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.44
SP140-207ENST00000456542 ABCC11Q96J66 1382 aa12.32□□□□□ -0.44
SP140-207ENST00000456542 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
SP140-207ENST00000456542 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
SP140-207ENST00000456542 YTHDC2Q9H6S0 1430 aaKnown RBP12.32□□□□□ -0.44
SP140-207ENST00000456542 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
SP140-207ENST00000456542 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
SP140-207ENST00000456542 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
SP140-207ENST00000456542 CFAP70Q5T0N1 1121 aa12.31□□□□□ -0.44
SP140-207ENST00000456542 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
SP140-207ENST00000456542 KDM2AQ9Y2K7 1162 aa12.31□□□□□ -0.44
SP140-207ENST00000456542 C14orf37Q86TY3 774 aa12.3□□□□□ -0.44
SP140-207ENST00000456542 FAM135BQ49AJ0 1406 aa12.29□□□□□ -0.44
SP140-207ENST00000456542 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
SP140-207ENST00000456542 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
SP140-207ENST00000456542 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
SP140-207ENST00000456542 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
SP140-207ENST00000456542 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
SP140-207ENST00000456542 SIRT1Q96EB6 747 aa12.28□□□□□ -0.44
SP140-207ENST00000456542 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
SP140-207ENST00000456542 ROBO1Q9Y6N7 1651 aa12.28□□□□□ -0.44
SP140-207ENST00000456542 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.44
SP140-207ENST00000456542 SOCS7O14512 581 aa12.27□□□□□ -0.45
SP140-207ENST00000456542 ATF3P18847 181 aa12.27□□□□□ -0.45
SP140-207ENST00000456542 NEUROD1Q13562 356 aa12.27□□□□□ -0.45
SP140-207ENST00000456542 SLAIN2Q9P270 581 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms