RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
TRA2B-206ENST00000456380 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
TRA2B-206ENST00000456380 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
TRA2B-206ENST00000456380 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
TRA2B-206ENST00000456380 PLEKHG1Q9ULL1 1385 aa19.18■□□□□ 0.66
TRA2B-206ENST00000456380 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
TRA2B-206ENST00000456380 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
TRA2B-206ENST00000456380 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
TRA2B-206ENST00000456380 HDGFP51858 240 aaKnown RBP19.16■□□□□ 0.66
TRA2B-206ENST00000456380 MSH6P52701 1360 aa19.16■□□□□ 0.66
TRA2B-206ENST00000456380 SLAIN2Q9P270 581 aa19.15■□□□□ 0.66
TRA2B-206ENST00000456380 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
TRA2B-206ENST00000456380 TBX22Q9Y458 520 aa19.14■□□□□ 0.65
TRA2B-206ENST00000456380 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
TRA2B-206ENST00000456380 POTEAQ6S8J7 498 aa19.13■□□□□ 0.65
TRA2B-206ENST00000456380 MYO5BQ9ULV0 1848 aa19.12■□□□□ 0.65
TRA2B-206ENST00000456380 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
TRA2B-206ENST00000456380 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
TRA2B-206ENST00000456380 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRA2B-206ENST00000456380 UNC13BO14795 1591 aa19.11■□□□□ 0.65
TRA2B-206ENST00000456380 CHD2O14647 1828 aaKnown RBP19.1■□□□□ 0.65
TRA2B-206ENST00000456380 ROCK1Q13464 1354 aa19.1■□□□□ 0.65
TRA2B-206ENST00000456380 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
TRA2B-206ENST00000456380 E9PCH4 1651 aa19.07■□□□□ 0.64
TRA2B-206ENST00000456380 NCOA3Q9Y6Q9 1424 aa19.07■□□□□ 0.64
TRA2B-206ENST00000456380 NUP155O75694 1391 aa19.06■□□□□ 0.64
TRA2B-206ENST00000456380 JCADQ9P266 1359 aa19.05■□□□□ 0.64
TRA2B-206ENST00000456380 IQGAP3Q86VI3 1631 aa19.04■□□□□ 0.64
TRA2B-206ENST00000456380 ITGAEP38570 1179 aa19.04■□□□□ 0.64
TRA2B-206ENST00000456380 C14orf37Q86TY3 774 aa19.04■□□□□ 0.64
TRA2B-206ENST00000456380 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
TRA2B-206ENST00000456380 PHLPP1O60346 1717 aa19.03■□□□□ 0.64
TRA2B-206ENST00000456380 C19orf44Q9H6X5 657 aa19.03■□□□□ 0.64
TRA2B-206ENST00000456380 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
TRA2B-206ENST00000456380 AMOTL2Q9Y2J4 779 aa19.01■□□□□ 0.63
TRA2B-206ENST00000456380 DIP2AQ14689 1571 aa19■□□□□ 0.63
TRA2B-206ENST00000456380 PTPRUQ92729 1446 aa19■□□□□ 0.63
TRA2B-206ENST00000456380 ATF3P18847 181 aa19■□□□□ 0.63
TRA2B-206ENST00000456380 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
TRA2B-206ENST00000456380 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
TRA2B-206ENST00000456380 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.98■□□□□ 0.63
TRA2B-206ENST00000456380 TRPM2O94759 1503 aa18.97■□□□□ 0.63
TRA2B-206ENST00000456380 SPATA31A6Q5VVP1 1343 aa18.96■□□□□ 0.63
TRA2B-206ENST00000456380 LRP6O75581 1613 aa18.95■□□□□ 0.62
TRA2B-206ENST00000456380 BRINP3Q76B58 766 aa18.95■□□□□ 0.62
TRA2B-206ENST00000456380 AHDC1Q5TGY3 1603 aaPredicted RBP18.94■□□□□ 0.62
TRA2B-206ENST00000456380 ZNF326Q5BKZ1 582 aaKnown RBP18.93■□□□□ 0.62
TRA2B-206ENST00000456380 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
TRA2B-206ENST00000456380 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
TRA2B-206ENST00000456380 METP08581 1390 aa18.91■□□□□ 0.62
TRA2B-206ENST00000456380 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
TRA2B-206ENST00000456380 DCCP43146 1447 aa18.9■□□□□ 0.62
TRA2B-206ENST00000456380 ZNF772Q68DY9 489 aaPredicted RBP18.89■□□□□ 0.61
TRA2B-206ENST00000456380 SPHKAPQ2M3C7 1700 aa18.88■□□□□ 0.61
TRA2B-206ENST00000456380 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
TRA2B-206ENST00000456380 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
TRA2B-206ENST00000456380 SHPRHQ149N8 1683 aa18.87■□□□□ 0.61
TRA2B-206ENST00000456380 MST1RQ04912 1400 aa18.87■□□□□ 0.61
TRA2B-206ENST00000456380 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
TRA2B-206ENST00000456380 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
TRA2B-206ENST00000456380 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
TRA2B-206ENST00000456380 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
TRA2B-206ENST00000456380 TRIM52Q96A61 297 aa18.83■□□□□ 0.61
TRA2B-206ENST00000456380 SETD5Q9C0A6 1442 aa18.83■□□□□ 0.61
TRA2B-206ENST00000456380 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.61
TRA2B-206ENST00000456380 CLTCL1P53675 1640 aa18.83■□□□□ 0.61
TRA2B-206ENST00000456380 NAIPQ13075 1403 aa18.82■□□□□ 0.6
TRA2B-206ENST00000456380 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
TRA2B-206ENST00000456380 ADGRL3Q9HAR2 1447 aa18.81■□□□□ 0.6
TRA2B-206ENST00000456380 LRRC59Q96AG4 307 aaKnown RBP18.81■□□□□ 0.6
TRA2B-206ENST00000456380 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
TRA2B-206ENST00000456380 RXRBP28702 533 aa18.8■□□□□ 0.6
TRA2B-206ENST00000456380 UPF1Q92900 1129 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRA2B-206ENST00000456380 AFF2P51816 1311 aa18.79■□□□□ 0.6
TRA2B-206ENST00000456380 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
TRA2B-206ENST00000456380 SRCAPQ6ZRS2 3230 aa18.77■□□□□ 0.6
TRA2B-206ENST00000456380 VGFO15240 615 aaPredicted RBP18.76■□□□□ 0.59
TRA2B-206ENST00000456380 PNPLA6Q8IY17 1366 aa18.75■□□□□ 0.59
TRA2B-206ENST00000456380 C1orf167Q5SNV9 1468 aa18.75■□□□□ 0.59
TRA2B-206ENST00000456380 NALCNQ8IZF0 1738 aa18.75■□□□□ 0.59
TRA2B-206ENST00000456380 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
TRA2B-206ENST00000456380 C8orf37Q96NL8 207 aa18.74■□□□□ 0.59
TRA2B-206ENST00000456380 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
TRA2B-206ENST00000456380 KIF1BO60333 1816 aa18.74■□□□□ 0.59
TRA2B-206ENST00000456380 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
TRA2B-206ENST00000456380 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
TRA2B-206ENST00000456380 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
TRA2B-206ENST00000456380 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
TRA2B-206ENST00000456380 HFM1A2PYH4 1435 aa18.72■□□□□ 0.59
TRA2B-206ENST00000456380 QTRT2Q9H974 415 aaKnown RBP18.71■□□□□ 0.59
TRA2B-206ENST00000456380 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
TRA2B-206ENST00000456380 PRAG1Q86YV5 1406 aa18.69■□□□□ 0.58
TRA2B-206ENST00000456380 ADAMTS2O95450 1211 aa18.69■□□□□ 0.58
TRA2B-206ENST00000456380 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
TRA2B-206ENST00000456380 NGLY1Q96IV0 654 aa18.67■□□□□ 0.58
TRA2B-206ENST00000456380 FOXD1Q16676 465 aa18.66■□□□□ 0.58
TRA2B-206ENST00000456380 LAMC1P11047 1609 aa18.66■□□□□ 0.58
TRA2B-206ENST00000456380 RGS12O14924 1447 aa18.66■□□□□ 0.58
TRA2B-206ENST00000456380 EP400Q96L91 3159 aa18.63■□□□□ 0.57
TRA2B-206ENST00000456380 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms