RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
TOP3B-212ENST00000456075 FOXD1Q16676 465 aa15.29■□□□□ 0.04
TOP3B-212ENST00000456075 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
TOP3B-212ENST00000456075 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-212ENST00000456075 LTBP4Q8N2S1 1624 aa15.28■□□□□ 0.04
TOP3B-212ENST00000456075 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.04
TOP3B-212ENST00000456075 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-212ENST00000456075 CLTCL1P53675 1640 aa15.27■□□□□ 0.03
TOP3B-212ENST00000456075 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
TOP3B-212ENST00000456075 ZFYVE9O95405 1425 aa15.26■□□□□ 0.03
TOP3B-212ENST00000456075 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
TOP3B-212ENST00000456075 CPS1P31327 1500 aa15.26■□□□□ 0.03
TOP3B-212ENST00000456075 PLEKHG1Q9ULL1 1385 aa15.25■□□□□ 0.03
TOP3B-212ENST00000456075 HRCP23327 699 aa15.25■□□□□ 0.03
TOP3B-212ENST00000456075 KIF1BO60333 1816 aa15.24■□□□□ 0.03
TOP3B-212ENST00000456075 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
TOP3B-212ENST00000456075 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
TOP3B-212ENST00000456075 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-212ENST00000456075 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
TOP3B-212ENST00000456075 KCNA6P17658 529 aa15.18■□□□□ 0.02
TOP3B-212ENST00000456075 RGL3Q3MIN7 710 aa15.18■□□□□ 0.02
TOP3B-212ENST00000456075 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
TOP3B-212ENST00000456075 DIP2AQ14689 1571 aa15.17■□□□□ 0.02
TOP3B-212ENST00000456075 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-212ENST00000456075 NEXMIFQ5QGS0 1516 aa15.17■□□□□ 0.02
TOP3B-212ENST00000456075 TOM1O60784 492 aa15.15■□□□□ 0.02
TOP3B-212ENST00000456075 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-212ENST00000456075 LRRC7Q96NW7 1537 aa15.15■□□□□ 0.02
TOP3B-212ENST00000456075 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
TOP3B-212ENST00000456075 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
TOP3B-212ENST00000456075 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
TOP3B-212ENST00000456075 PIK3R4Q99570 1358 aa15.13■□□□□ 0.01
TOP3B-212ENST00000456075 NKTRP30414 1462 aaKnown RBP15.13■□□□□ 0.01
TOP3B-212ENST00000456075 SETBP1Q9Y6X0 1596 aa15.12■□□□□ 0.01
TOP3B-212ENST00000456075 SPATA31E1Q6ZUB1 1445 aa15.12■□□□□ 0.01
TOP3B-212ENST00000456075 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
TOP3B-212ENST00000456075 ANKRD30BQ9BXX2 1392 aa15.11■□□□□ 0.01
TOP3B-212ENST00000456075 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
TOP3B-212ENST00000456075 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
TOP3B-212ENST00000456075 PIP4K2BP78356 416 aa15.1■□□□□ 0.01
TOP3B-212ENST00000456075 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
TOP3B-212ENST00000456075 AMOTL2Q9Y2J4 779 aa15.09■□□□□ 0.01
TOP3B-212ENST00000456075 PPLO60437 1756 aa15.08■□□□□ 0.01
TOP3B-212ENST00000456075 NRXN3Q9Y4C0 1643 aa15.08■□□□□ 0
TOP3B-212ENST00000456075 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
TOP3B-212ENST00000456075 ADGRF5Q8IZF2 1346 aa15.07■□□□□ 0
TOP3B-212ENST00000456075 METP08581 1390 aa15.07■□□□□ 0
TOP3B-212ENST00000456075 MSH6P52701 1360 aa15.07■□□□□ 0
TOP3B-212ENST00000456075 ALKQ9UM73 1620 aa15.04■□□□□ -0
TOP3B-212ENST00000456075 PTPRUQ92729 1446 aa15.04■□□□□ -0
TOP3B-212ENST00000456075 NCOA3Q9Y6Q9 1424 aa15.03■□□□□ -0
TOP3B-212ENST00000456075 IFT172Q9UG01 1749 aa15.03■□□□□ -0
TOP3B-212ENST00000456075 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
TOP3B-212ENST00000456075 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
TOP3B-212ENST00000456075 MYOM2P54296 1465 aa15.01□□□□□ -0.01
TOP3B-212ENST00000456075 PIK3C2GO75747 1445 aa15.01□□□□□ -0.01
TOP3B-212ENST00000456075 ATF3P18847 181 aa15.01□□□□□ -0.01
TOP3B-212ENST00000456075 XIRP1Q702N8 1843 aaKnown RBP15.01□□□□□ -0.01
TOP3B-212ENST00000456075 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
TOP3B-212ENST00000456075 STAC3Q96MF2 364 aa15□□□□□ -0.01
TOP3B-212ENST00000456075 C19orf44Q9H6X5 657 aa15□□□□□ -0.01
TOP3B-212ENST00000456075 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
TOP3B-212ENST00000456075 STK26Q9P289 416 aa14.99□□□□□ -0.01
TOP3B-212ENST00000456075 PTCH1Q13635 1447 aa14.98□□□□□ -0.01
TOP3B-212ENST00000456075 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
TOP3B-212ENST00000456075 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
TOP3B-212ENST00000456075 C14orf93Q9H972 538 aaKnown RBP14.97□□□□□ -0.01
TOP3B-212ENST00000456075 DHX57Q6P158 1386 aaKnown RBP14.97□□□□□ -0.01
TOP3B-212ENST00000456075 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 LAMC1P11047 1609 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 HSPA1LP34931 641 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 NEUROD1Q13562 356 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 CFAP70Q5T0N1 1121 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
TOP3B-212ENST00000456075 LRPPRCP42704 1394 aaKnown RBP14.95□□□□□ -0.02
TOP3B-212ENST00000456075 ROBO2Q9HCK4 1378 aa14.95□□□□□ -0.02
TOP3B-212ENST00000456075 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
TOP3B-212ENST00000456075 PCGF6Q9BYE7 350 aa14.94□□□□□ -0.02
TOP3B-212ENST00000456075 DCCP43146 1447 aa14.93□□□□□ -0.02
TOP3B-212ENST00000456075 FAM135BQ49AJ0 1406 aa14.93□□□□□ -0.02
TOP3B-212ENST00000456075 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
TOP3B-212ENST00000456075 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
TOP3B-212ENST00000456075 SIN3AQ96ST3 1273 aa14.93□□□□□ -0.02
TOP3B-212ENST00000456075 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
TOP3B-212ENST00000456075 ABCC11Q96J66 1382 aa14.92□□□□□ -0.02
TOP3B-212ENST00000456075 ASXL1Q8IXJ9 1541 aa14.91□□□□□ -0.02
TOP3B-212ENST00000456075 ROBO1Q9Y6N7 1651 aa14.9□□□□□ -0.02
TOP3B-212ENST00000456075 TECPR2O15040 1411 aa14.9□□□□□ -0.02
TOP3B-212ENST00000456075 WAPLQ7Z5K2 1190 aa14.89□□□□□ -0.03
TOP3B-212ENST00000456075 POGKQ9P215 609 aa14.89□□□□□ -0.03
TOP3B-212ENST00000456075 NALCNQ8IZF0 1738 aa14.89□□□□□ -0.03
TOP3B-212ENST00000456075 L3MBTL2Q969R5 705 aa14.88□□□□□ -0.03
TOP3B-212ENST00000456075 KNDC1Q76NI1 1749 aa14.88□□□□□ -0.03
TOP3B-212ENST00000456075 SIRT1Q96EB6 747 aa14.87□□□□□ -0.03
TOP3B-212ENST00000456075 PRAM1Q96QH2 718 aa14.87□□□□□ -0.03
TOP3B-212ENST00000456075 TRAK1Q9UPV9 953 aa14.87□□□□□ -0.03
TOP3B-212ENST00000456075 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
TOP3B-212ENST00000456075 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
TOP3B-212ENST00000456075 MST1RQ04912 1400 aa14.85□□□□□ -0.03
TOP3B-212ENST00000456075 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms