RNA–Protein interactions for RNA: ENST00000455830.2

CRAT-206, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-206ENST00000455830 IQGAP3Q86VI3 1631 aa32.53■■■□□ 2.8
CRAT-206ENST00000455830 KCNA6P17658 529 aa32.53■■■□□ 2.8
CRAT-206ENST00000455830 TMEM94Q12767 1356 aa32.52■■■□□ 2.8
CRAT-206ENST00000455830 NWD1Q149M9 1564 aa32.52■■■□□ 2.8
CRAT-206ENST00000455830 PPARGC1BQ86YN6 1023 aaKnown RBP32.49■■■□□ 2.79
CRAT-206ENST00000455830 RIMS2Q9UQ26 1411 aa32.48■■■□□ 2.79
CRAT-206ENST00000455830 ITGAEP38570 1179 aa32.47■■■□□ 2.79
CRAT-206ENST00000455830 BCANQ96GW7 911 aa32.46■■■□□ 2.79
CRAT-206ENST00000455830 NKTRP30414 1462 aaKnown RBP32.46■■■□□ 2.79
CRAT-206ENST00000455830 PLEKHG1Q9ULL1 1385 aa32.45■■■□□ 2.79
CRAT-206ENST00000455830 PROSER2Q86WR7 435 aaPredicted RBP32.44■■■□□ 2.78
CRAT-206ENST00000455830 RBM33Q96EV2 1170 aaKnown RBP32.44■■■□□ 2.78
CRAT-206ENST00000455830 NUP155O75694 1391 aa32.42■■■□□ 2.78
CRAT-206ENST00000455830 PPP1R15AO75807 674 aaPredicted RBP32.41■■■□□ 2.78
CRAT-206ENST00000455830 CHD2O14647 1828 aaKnown RBP32.4■■■□□ 2.78
CRAT-206ENST00000455830 CHGAP10645 457 aaKnown RBP32.4■■■□□ 2.78
CRAT-206ENST00000455830 FAM135BQ49AJ0 1406 aa32.4■■■□□ 2.78
CRAT-206ENST00000455830 HDGFP51858 240 aaKnown RBP32.39■■■□□ 2.78
CRAT-206ENST00000455830 PHF23Q9BUL5 403 aaPredicted RBP32.37■■■□□ 2.77
CRAT-206ENST00000455830 ROBO1Q9Y6N7 1651 aa32.36■■■□□ 2.77
CRAT-206ENST00000455830 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.34■■■□□ 2.77
CRAT-206ENST00000455830 NUTM2DQ5VT03 806 aaPredicted RBP32.32■■■□□ 2.76
CRAT-206ENST00000455830 TBX22Q9Y458 520 aa32.31■■■□□ 2.76
CRAT-206ENST00000455830 ADAMTS13Q76LX8 1427 aa32.31■■■□□ 2.76
CRAT-206ENST00000455830 MSH6P52701 1360 aa32.31■■■□□ 2.76
CRAT-206ENST00000455830 DIP2AQ14689 1571 aa32.29■■■□□ 2.76
CRAT-206ENST00000455830 SPHKAPQ2M3C7 1700 aa32.29■■■□□ 2.76
CRAT-206ENST00000455830 RRBP1Q9P2E9 1410 aaKnown RBP32.26■■■□□ 2.75
CRAT-206ENST00000455830 PIK3R4Q99570 1358 aa32.2■■■□□ 2.75
CRAT-206ENST00000455830 SLAIN2Q9P270 581 aa32.2■■■□□ 2.75
CRAT-206ENST00000455830 NCOA3Q9Y6Q9 1424 aa32.19■■■□□ 2.74
CRAT-206ENST00000455830 TRPM2O94759 1503 aa32.19■■■□□ 2.74
CRAT-206ENST00000455830 NRXN3Q9Y4C0 1643 aa32.16■■■□□ 2.74
CRAT-206ENST00000455830 RGS17Q9UGC6 210 aaPredicted RBP32.16■■■□□ 2.74
CRAT-206ENST00000455830 PHLPP1O60346 1717 aa32.16■■■□□ 2.74
CRAT-206ENST00000455830 NAIPQ13075 1403 aa32.16■■■□□ 2.74
CRAT-206ENST00000455830 PTPRUQ92729 1446 aa32.15■■■□□ 2.74
CRAT-206ENST00000455830 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.14■■■□□ 2.74
CRAT-206ENST00000455830 CLTCL1P53675 1640 aa32.13■■■□□ 2.73
CRAT-206ENST00000455830 SETBP1Q9Y6X0 1596 aa32.13■■■□□ 2.73
CRAT-206ENST00000455830 C14orf37Q86TY3 774 aa32.12■■■□□ 2.73
CRAT-206ENST00000455830 AMOTL2Q9Y2J4 779 aa32.1■■■□□ 2.73
CRAT-206ENST00000455830 ZNF326Q5BKZ1 582 aaKnown RBP32.09■■■□□ 2.73
CRAT-206ENST00000455830 XRN1Q8IZH2 1706 aaKnown RBP32.09■■■□□ 2.73
CRAT-206ENST00000455830 COL16A1Q07092 1604 aaPredicted RBP32.07■■■□□ 2.72
CRAT-206ENST00000455830 C19orf44Q9H6X5 657 aa32.06■■■□□ 2.72
CRAT-206ENST00000455830 NEXMIFQ5QGS0 1516 aa32.05■■■□□ 2.72
CRAT-206ENST00000455830 CADPS2Q86UW7 1296 aa32.05■■■□□ 2.72
CRAT-206ENST00000455830 KIF1BO60333 1816 aa32.03■■■□□ 2.72
CRAT-206ENST00000455830 JCADQ9P266 1359 aa32.03■■■□□ 2.72
CRAT-206ENST00000455830 HFM1A2PYH4 1435 aa32.02■■■□□ 2.72
CRAT-206ENST00000455830 ATF3P18847 181 aa32.02■■■□□ 2.72
CRAT-206ENST00000455830 METP08581 1390 aa32■■■□□ 2.71
CRAT-206ENST00000455830 AHDC1Q5TGY3 1603 aaPredicted RBP32■■■□□ 2.71
CRAT-206ENST00000455830 POTEAQ6S8J7 498 aa31.97■■■□□ 2.71
CRAT-206ENST00000455830 DCCP43146 1447 aa31.96■■■□□ 2.71
CRAT-206ENST00000455830 TRIM52Q96A61 297 aa31.96■■■□□ 2.71
CRAT-206ENST00000455830 BRINP3Q76B58 766 aa31.91■■■□□ 2.7
CRAT-206ENST00000455830 SHPRHQ149N8 1683 aa31.89■■■□□ 2.7
CRAT-206ENST00000455830 LRP6O75581 1613 aa31.89■■■□□ 2.7
CRAT-206ENST00000455830 SLC4A1APQ9BWU0 796 aaKnown RBP31.88■■■□□ 2.69
CRAT-206ENST00000455830 MST1RQ04912 1400 aa31.88■■■□□ 2.69
CRAT-206ENST00000455830 SETD1AO15047 1707 aaKnown RBP31.88■■■□□ 2.69
CRAT-206ENST00000455830 NALCNQ8IZF0 1738 aa31.87■■■□□ 2.69
CRAT-206ENST00000455830 ASXL1Q8IXJ9 1541 aa31.87■■■□□ 2.69
CRAT-206ENST00000455830 SPATA31A6Q5VVP1 1343 aa31.86■■■□□ 2.69
CRAT-206ENST00000455830 ADGRL3Q9HAR2 1447 aa31.85■■■□□ 2.69
CRAT-206ENST00000455830 NHSL1Q5SYE7 1610 aa31.82■■■□□ 2.69
CRAT-206ENST00000455830 PPLO60437 1756 aa31.82■■■□□ 2.68
CRAT-206ENST00000455830 VGFO15240 615 aaPredicted RBP31.81■■■□□ 2.68
CRAT-206ENST00000455830 RPGRIP1LQ68CZ1 1315 aa31.78■■■□□ 2.68
CRAT-206ENST00000455830 PTCH1Q13635 1447 aa31.78■■■□□ 2.68
CRAT-206ENST00000455830 FOXD1Q16676 465 aa31.77■■■□□ 2.68
CRAT-206ENST00000455830 MEX3CQ5U5Q3 659 aaKnown RBP31.76■■■□□ 2.67
CRAT-206ENST00000455830 SETD5Q9C0A6 1442 aa31.75■■■□□ 2.67
CRAT-206ENST00000455830 ROBO2Q9HCK4 1378 aa31.74■■■□□ 2.67
CRAT-206ENST00000455830 PRAG1Q86YV5 1406 aa31.73■■■□□ 2.67
CRAT-206ENST00000455830 DDX17Q92841 729 aaKnown RBP31.69■■■□□ 2.66
CRAT-206ENST00000455830 C1orf167Q5SNV9 1468 aa31.69■■■□□ 2.66
CRAT-206ENST00000455830 CCDC144AA2RUR9 1427 aa31.67■■■□□ 2.66
CRAT-206ENST00000455830 NUTM2BA6NNL0 878 aaPredicted RBP31.67■■■□□ 2.66
CRAT-206ENST00000455830 NUTM2EB1AL46 878 aaPredicted RBP31.67■■■□□ 2.66
CRAT-206ENST00000455830 NUTM2AQ8IVF1 878 aaPredicted RBP31.67■■■□□ 2.66
CRAT-206ENST00000455830 ZNF772Q68DY9 489 aaPredicted RBP31.66■■■□□ 2.66
CRAT-206ENST00000455830 LRRC59Q96AG4 307 aaKnown RBP31.65■■■□□ 2.66
CRAT-206ENST00000455830 MPHOSPH9Q99550 1183 aa31.64■■■□□ 2.66
CRAT-206ENST00000455830 SPATA31E1Q6ZUB1 1445 aa31.64■■■□□ 2.66
CRAT-206ENST00000455830 IFT172Q9UG01 1749 aa31.63■■■□□ 2.65
CRAT-206ENST00000455830 LAMC1P11047 1609 aa31.63■■■□□ 2.65
CRAT-206ENST00000455830 ADGRF5Q8IZF2 1346 aa31.62■■■□□ 2.65
CRAT-206ENST00000455830 PNPLA6Q8IY17 1366 aa31.61■■■□□ 2.65
CRAT-206ENST00000455830 RGL3Q3MIN7 710 aa31.6■■■□□ 2.65
CRAT-206ENST00000455830 ORAI2Q96SN7 254 aa31.58■■■□□ 2.65
CRAT-206ENST00000455830 CDC42BPGQ6DT37 1551 aa31.55■■■□□ 2.64
CRAT-206ENST00000455830 ANKRD30BQ9BXX2 1392 aa31.55■■■□□ 2.64
CRAT-206ENST00000455830 AFF2P51816 1311 aa31.54■■■□□ 2.64
CRAT-206ENST00000455830 SOS2Q07890 1332 aaPredicted RBP31.52■■■□□ 2.64
CRAT-206ENST00000455830 TECPR2O15040 1411 aa31.51■■■□□ 2.64
CRAT-206ENST00000455830 PIK3C2GO75747 1445 aa31.5■■■□□ 2.63
CRAT-206ENST00000455830 RXRBP28702 533 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms