RNA–Protein interactions for RNA: ENST00000455292.5

PTPA-226, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5

Gene PTPA, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-226ENST00000455292 SLC26A8Q96RN1 970 aa29.23■■■□□ 2.27
PTPA-226ENST00000455292 SLC4A1APQ9BWU0 796 aaKnown RBP29.23■■■□□ 2.27
PTPA-226ENST00000455292 NUTM2DQ5VT03 806 aaPredicted RBP29.22■■■□□ 2.27
PTPA-226ENST00000455292 PPP1R15AO75807 674 aaPredicted RBP29.2■■■□□ 2.26
PTPA-226ENST00000455292 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.26
PTPA-226ENST00000455292 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
PTPA-226ENST00000455292 BCANQ96GW7 911 aa29.19■■■□□ 2.26
PTPA-226ENST00000455292 PLEKHG1Q9ULL1 1385 aa29.17■■■□□ 2.26
PTPA-226ENST00000455292 SETD5Q9C0A6 1442 aa29.17■■■□□ 2.26
PTPA-226ENST00000455292 KIF1BO60333 1816 aa29.17■■■□□ 2.26
PTPA-226ENST00000455292 FOXD1Q16676 465 aa29.16■■■□□ 2.26
PTPA-226ENST00000455292 HDGFP51858 240 aaKnown RBP29.15■■■□□ 2.26
PTPA-226ENST00000455292 XIRP1Q702N8 1843 aaKnown RBP29.15■■■□□ 2.26
PTPA-226ENST00000455292 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.14■■■□□ 2.26
PTPA-226ENST00000455292 ZNF326Q5BKZ1 582 aaKnown RBP29.1■■■□□ 2.25
PTPA-226ENST00000455292 MPHOSPH9Q99550 1183 aa29.1■■■□□ 2.25
PTPA-226ENST00000455292 RAB3GAP2Q9H2M9 1393 aa29.09■■■□□ 2.25
PTPA-226ENST00000455292 CHD2O14647 1828 aaKnown RBP29.08■■■□□ 2.25
PTPA-226ENST00000455292 ADAMTS13Q76LX8 1427 aa29.08■■■□□ 2.25
PTPA-226ENST00000455292 NWD1Q149M9 1564 aa29.08■■■□□ 2.25
PTPA-226ENST00000455292 ALKQ9UM73 1620 aa29.08■■■□□ 2.25
PTPA-226ENST00000455292 KCNA6P17658 529 aa29.07■■■□□ 2.24
PTPA-226ENST00000455292 NEXMIFQ5QGS0 1516 aa29.06■■■□□ 2.24
PTPA-226ENST00000455292 NRXN3Q9Y4C0 1643 aa29.05■■■□□ 2.24
PTPA-226ENST00000455292 PIP4K2BP78356 416 aa29.03■■■□□ 2.24
PTPA-226ENST00000455292 TBX22Q9Y458 520 aa29.03■■■□□ 2.24
PTPA-226ENST00000455292 SCAF1Q9H7N4 1312 aaKnown RBP29.02■■■□□ 2.24
PTPA-226ENST00000455292 DIP2AQ14689 1571 aa29.02■■■□□ 2.24
PTPA-226ENST00000455292 TOM1O60784 492 aa29.02■■■□□ 2.24
PTPA-226ENST00000455292 RBM33Q96EV2 1170 aaKnown RBP29.02■■■□□ 2.24
PTPA-226ENST00000455292 NKTRP30414 1462 aaKnown RBP29■■■□□ 2.23
PTPA-226ENST00000455292 TMEM94Q12767 1356 aa29■■■□□ 2.23
PTPA-226ENST00000455292 PROSER2Q86WR7 435 aaPredicted RBP28.99■■■□□ 2.23
PTPA-226ENST00000455292 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
PTPA-226ENST00000455292 PPLO60437 1756 aa28.96■■■□□ 2.23
PTPA-226ENST00000455292 CCDC144AA2RUR9 1427 aa28.95■■■□□ 2.23
PTPA-226ENST00000455292 ACIN1Q9UKV3 1341 aaKnown RBP28.94■■■□□ 2.22
PTPA-226ENST00000455292 PTPRUQ92729 1446 aa28.93■■■□□ 2.22
PTPA-226ENST00000455292 PIK3R4Q99570 1358 aa28.9■■■□□ 2.22
PTPA-226ENST00000455292 SPATA31E1Q6ZUB1 1445 aa28.88■■■□□ 2.21
PTPA-226ENST00000455292 METP08581 1390 aa28.88■■■□□ 2.21
PTPA-226ENST00000455292 XRN1Q8IZH2 1706 aaKnown RBP28.87■■■□□ 2.21
PTPA-226ENST00000455292 RGL3Q3MIN7 710 aa28.87■■■□□ 2.21
PTPA-226ENST00000455292 RPGRIP1LQ68CZ1 1315 aa28.87■■■□□ 2.21
PTPA-226ENST00000455292 SETD1AO15047 1707 aaKnown RBP28.86■■■□□ 2.21
PTPA-226ENST00000455292 IFT172Q9UG01 1749 aa28.86■■■□□ 2.21
PTPA-226ENST00000455292 HSPA1LP34931 641 aa28.86■■■□□ 2.21
PTPA-226ENST00000455292 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
PTPA-226ENST00000455292 VGFO15240 615 aaPredicted RBP28.85■■■□□ 2.21
PTPA-226ENST00000455292 MSH6P52701 1360 aa28.81■■■□□ 2.2
PTPA-226ENST00000455292 HRCP23327 699 aa28.81■■■□□ 2.2
PTPA-226ENST00000455292 ADGRF5Q8IZF2 1346 aa28.78■■■□□ 2.2
PTPA-226ENST00000455292 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
PTPA-226ENST00000455292 C14orf37Q86TY3 774 aa28.77■■■□□ 2.2
PTPA-226ENST00000455292 ANKRD30BQ9BXX2 1392 aa28.76■■■□□ 2.2
PTPA-226ENST00000455292 ROBO1Q9Y6N7 1651 aa28.75■■■□□ 2.19
PTPA-226ENST00000455292 NCOA3Q9Y6Q9 1424 aa28.75■■■□□ 2.19
PTPA-226ENST00000455292 FAM135BQ49AJ0 1406 aa28.7■■■□□ 2.19
PTPA-226ENST00000455292 C19orf44Q9H6X5 657 aa28.68■■■□□ 2.18
PTPA-226ENST00000455292 SLAIN2Q9P270 581 aa28.68■■■□□ 2.18
PTPA-226ENST00000455292 NALCNQ8IZF0 1738 aa28.67■■■□□ 2.18
PTPA-226ENST00000455292 PIK3C2GO75747 1445 aa28.66■■■□□ 2.18
PTPA-226ENST00000455292 ASXL1Q8IXJ9 1541 aa28.64■■■□□ 2.18
PTPA-226ENST00000455292 ROBO2Q9HCK4 1378 aa28.64■■■□□ 2.18
PTPA-226ENST00000455292 DISP3Q9P2K9 1392 aa28.64■■■□□ 2.18
PTPA-226ENST00000455292 PTCH1Q13635 1447 aa28.62■■■□□ 2.17
PTPA-226ENST00000455292 ATF3P18847 181 aa28.62■■■□□ 2.17
PTPA-226ENST00000455292 CADPS2Q86UW7 1296 aa28.62■■■□□ 2.17
PTPA-226ENST00000455292 MYOM2P54296 1465 aa28.61■■■□□ 2.17
PTPA-226ENST00000455292 ADGRL3Q9HAR2 1447 aa28.6■■■□□ 2.17
PTPA-226ENST00000455292 NRXN1Q9ULB1 1477 aa28.6■■■□□ 2.17
PTPA-226ENST00000455292 PRAG1Q86YV5 1406 aa28.6■■■□□ 2.17
PTPA-226ENST00000455292 TMEM132EQ6IEE7 984 aa28.59■■■□□ 2.17
PTPA-226ENST00000455292 DCCP43146 1447 aa28.58■■■□□ 2.17
PTPA-226ENST00000455292 PHLPP1O60346 1717 aa28.57■■■□□ 2.16
PTPA-226ENST00000455292 MED1Q15648 1581 aaPredicted RBP28.57■■■□□ 2.16
PTPA-226ENST00000455292 STK26Q9P289 416 aa28.56■■■□□ 2.16
PTPA-226ENST00000455292 CFAP70Q5T0N1 1121 aa28.54■■■□□ 2.16
PTPA-226ENST00000455292 KNDC1Q76NI1 1749 aa28.54■■■□□ 2.16
PTPA-226ENST00000455292 LAMC1P11047 1609 aa28.54■■■□□ 2.16
PTPA-226ENST00000455292 MST1RQ04912 1400 aa28.53■■■□□ 2.16
PTPA-226ENST00000455292 KDM2AQ9Y2K7 1162 aa28.53■■■□□ 2.16
PTPA-226ENST00000455292 LRPPRCP42704 1394 aaKnown RBP28.52■■■□□ 2.16
PTPA-226ENST00000455292 C14orf93Q9H972 538 aaKnown RBP28.52■■■□□ 2.16
PTPA-226ENST00000455292 DCAF11Q8TEB1 546 aa28.51■■■□□ 2.15
PTPA-226ENST00000455292 TECPR2O15040 1411 aa28.51■■■□□ 2.15
PTPA-226ENST00000455292 DHX57Q6P158 1386 aaKnown RBP28.5■■■□□ 2.15
PTPA-226ENST00000455292 YTHDC2Q9H6S0 1430 aaKnown RBP28.5■■■□□ 2.15
PTPA-226ENST00000455292 COL16A1Q07092 1604 aaPredicted RBP28.49■■■□□ 2.15
PTPA-226ENST00000455292 BRINP3Q76B58 766 aa28.48■■■□□ 2.15
PTPA-226ENST00000455292 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
PTPA-226ENST00000455292 ABCC11Q96J66 1382 aa28.48■■■□□ 2.15
PTPA-226ENST00000455292 AHDC1Q5TGY3 1603 aaPredicted RBP28.46■■■□□ 2.15
PTPA-226ENST00000455292 PLEKHH1Q9ULM0 1364 aa28.46■■■□□ 2.15
PTPA-226ENST00000455292 C1orf167Q5SNV9 1468 aa28.42■■■□□ 2.14
PTPA-226ENST00000455292 ILDR2Q71H61 639 aa28.42■■■□□ 2.14
PTPA-226ENST00000455292 ADGRB1O14514 1584 aa28.41■■■□□ 2.14
PTPA-226ENST00000455292 NHSL1Q5SYE7 1610 aa28.41■■■□□ 2.14
PTPA-226ENST00000455292 TRIM26Q12899 539 aaPredicted RBP28.41■■■□□ 2.14
PTPA-226ENST00000455292 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms